Last updated on 2026-07-03 09:50:51 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 5.87 | 141.35 | 147.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.11 | 98.72 | 102.83 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 11.00 | 412.29 | 423.29 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 175.00 | 186.00 | OK | |
| r-patched-linux-x86_64 | 2.10.0 | 8.08 | 134.21 | 142.29 | OK | |
| r-release-linux-x86_64 | 2.10.0 | OK | ||||
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 11.00 | 148.00 | 159.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 2.00 | 37.00 | 39.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 15.00 | 172.00 | 187.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/8s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: 6: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% xFUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8:
> test_loo_and_waic.R: doTryCatch(return(expr), name, parentenv, handler) 3:
> test_loo_and_waic.R: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE) 9:
> test_loo_and_waic.R: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 4:
> test_loo_and_waic.R: psis_smooth_tail(lw_tail, cutoff)10:
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: tryCatchList(expr, classes, parentenv, handlers)FUN(X[[i]], ...)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 11: 7: tryCatch(expr, error = function(e) {lapply(X = S, FUN = FUN, ...) call <- conditionCall(e)
> test_loo_and_waic.R: if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (is.na(w))
> test_loo_and_waic.R: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 10: type = "b")tryCatchList(expr, classes, parentenv, handlers) if (w > LONG)
> test_loo_and_waic.R: prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())11: }tryCatch(expr, error = function(e) { invisible(structure(msg, class = "try-error", condition = e)) call <- conditionCall(e)}) if (!is.null(call)) {
> test_loo_and_waic.R: if (identical(call[[1L]], quote(doTryCatch))) 12: call <- sys.call(-4L)try(lapply(X = S, FUN = FUN, ...), silent = TRUE) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b")
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: if (w > LONG) FUN(X[[i]], ...) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L]))
> test_loo_and_waic.R: if (!silent && isTRUE(getOption("show.error.messages"))) {15: cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[,
> test_loo_and_waic.R: i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: })
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16:
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env)do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, new_expectations <- the$test_expectations > starting_expectations method = method) if (snapshot_skipped) {
> test_loo_and_waic.R: skip("On CRAN")18: }importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, else if (!new_expectations && skip_on_empty) { method = is_method) skip_empty()
> test_loo_and_waic.R: }19: }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)21:
> test_loo_and_waic.R: withCallingHandlers(expr, warning = function(w) if (inherits(w, 26: classes)) tryInvokeRestart("muffleWarning"))doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 22: 27: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 23: 28: eval(code, test_env)tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 24: 29: eval(code, test_env)tryCatch(withCallingHandlers({
> test_loo_and_waic.R: eval(code, test_env)25: new_expectations <- the$test_expectations > starting_expectationswithCallingHandlers({ if (snapshot_skipped) { eval(code, test_env) skip("On CRAN") new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) { else if (!new_expectations && skip_on_empty) { skip("On CRAN") skip_empty() } } else if (!new_expectations && skip_on_empty) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip_empty() if (on_cran()) { }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) } skip(paste0("{", e$package, "} is not installed."))}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)}, snapshot_on_cran = function(cnd) {
> test_loo_and_waic.R: snapshot_skipped <<- TRUE26: invokeRestart("muffle_cran_snapshot")doTryCatch(return(expr), name, parentenv, handler)}, skip = handle_skip, warning = handle_warning, message = handle_message,
> test_loo_and_waic.R: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)27:
> test_loo_and_waic.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 30: 29: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")32: }withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") else if (!new_expectations && skip_on_empty) { } skip_empty() else if (!new_expectations && skip_on_empty) { } skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip(paste0("{", e$package, "} is not installed.")) if (on_cran()) { } skip(paste0("{", e$package, "} is not installed."))}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({34: eval(code, test_env)test_that("loo with cores=1 and cores=2 gives same results", new_expectations <- the$test_expectations > starting_expectations { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))35: }eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: 37: test_code(code, parent.frame())withCallingHandlers({
> test_loo_and_waic.R: eval(code, test_env)34: new_expectations <- the$test_expectations > starting_expectationstest_that("loo with cores=1 and cores=2 gives same results", if (snapshot_skipped) { { skip("On CRAN") loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, } cores = 2)) else if (!new_expectations && skip_on_empty) { expect_equal(loo1$estimates, loo2$estimates) skip_empty() }) }
> test_loo_and_waic.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {35: if (on_cran()) {eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")37: }, skip = handle_skip, warning = handle_warning, message = handle_message, withCallingHandlers({ error = handle_error, interrupt = handle_interrupt) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations38: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }40: }, snapshot_on_cran = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")41: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt) eval(code, test_env)
> test_loo_and_waic.R: new_expectations <- the$test_expectations > starting_expectations38: if (snapshot_skipped) {
> test_loo_and_waic.R: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: skip("On CRAN") }39: else if (!new_expectations && skip_on_empty) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip_empty()
> test_loo_and_waic.R: }40: }, expectation = handle_expectation, packageNotFoundError = function(e) {tryCatchList(expr, classes, parentenv, handlers) if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))41: }tryCatch(withCallingHandlers({}, snapshot_on_cran = function(cnd) { eval(code, test_env) snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)}, expectation = handle_expectation, packageNotFoundError = function(e) {
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: if (on_cran()) {withOneRestart(expr, restarts[[1L]]) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }44: }, snapshot_on_cran = function(cnd) {withRestarts(tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: eval(code, test_env)42: new_expectations <- the$test_expectations > starting_expectationsdoWithOneRestart(return(expr), restart) if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty()
> test_loo_and_waic.R: }43: }, expectation = handle_expectation, packageNotFoundError = function(e) {withOneRestart(expr, restarts[[1L]]) if (on_cran()) {
> test_loo_and_waic.R: skip(paste0("{", e$package, "} is not installed."))44: }withRestarts(tryCatch(withCallingHandlers({}, snapshot_on_cran = function(cnd) { eval(code, test_env) snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip("On CRAN") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), } end_test = function() { else if (!new_expectations && skip_on_empty) { }) skip_empty()
> test_loo_and_waic.R: }45: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, if (on_cran()) { error_call = error_call) skip(paste0("{", e$package, "} is not installed."))
> test_loo_and_waic.R: }47: }, snapshot_on_cran = function(cnd) {test_one_file(path, env = the$testing_env, shuffle = shuffle) snapshot_skipped <<- TRUE
> test_loo_and_waic.R: invokeRestart("muffle_cran_snapshot")48: }, skip = handle_skip, warning = handle_warning, message = handle_message, doTryCatch(return(expr), name, parentenv, handler) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
> test_loo_and_waic.R: end_test = function() {49: })tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 45: 50: test_code(code = exprs, env = env, reporter = get_reporter() %||% tryCatchList(expr, classes, parentenv, handlers) StopReporter$new())
> test_loo_and_waic.R:
> test_loo_and_waic.R: 51: 46: tryCatch(code, testthat_abort_reporter = function(cnd) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, cat(conditionMessage(cnd), "\n") error_call = error_call) NULL
> test_loo_and_waic.R: })47:
> test_loo_and_waic.R: test_one_file(path, env = the$testing_env, shuffle = shuffle)52:
> test_loo_and_waic.R: with_reporter(multi, test_one_file(path, env = the$testing_env, 48: shuffle = shuffle))doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R:
> test_loo_and_waic.R: 53: 49: asNamespace("testthat")$queue_task(path, shuffle)tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R:
> test_loo_and_waic.R: 54: 50: (function (path, shuffle) tryCatchList(expr, classes, parentenv, handlers){
> test_loo_and_waic.R: asNamespace("testthat")$queue_task(path, shuffle)51: })(base::quote("test_loo_and_waic.R"), base::quote(FALSE))tryCatch(code, testthat_abort_reporter = function(cnd) {
> test_loo_and_waic.R: cat(conditionMessage(cnd), "\n")55: NULL(function (what, args, quote = FALSE, envir = parent.frame()) }){
> test_loo_and_waic.R: if (!is.list(args)) 52: stop("second argument must be a list")with_reporter(multi, test_one_file(path, env = the$testing_env, if (quote) shuffle = shuffle)) args <- lapply(args, enquote)
> test_loo_and_waic.R: .Internal(do.call(what, args, envir))53: })(base::quote(function (path, shuffle) asNamespace("testthat")$queue_task(path, shuffle){
> test_loo_and_waic.R: asNamespace("testthat")$queue_task(path, shuffle)54: }), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, 55: quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", (function (what, args, quote = FALSE, envir = parent.frame()) compress = FALSE){
> test_loo_and_waic.R: if (!is.list(args)) 58: stop("second argument must be a list")base::withCallingHandlers({ if (quote) { args <- lapply(args, enquote) NULL .Internal(do.call(what, args, envir)) NULL})(base::quote(function (path, shuffle) }{ base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), asNamespace("testthat")$queue_task(path, shuffle) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, }), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, compress = FALSE) quote = TRUE) base::flush(base::stdout())
> test_loo_and_waic.R: base::flush(base::stderr())57: {base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), NULL base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, NULL quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", } compress = FALSE) base::invisible()
> test_loo_and_waic.R: }, error = function(e) {58: {base::withCallingHandlers({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", compress = FALSE) err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::flush(base::stdout()) envir = callr_data) base::flush(base::stderr()) base::rm("__callr_dump__", envir = .GlobalEnv) { } NULL e <- err$process_call(e) NULL e2 <- err$new_error("error in callr subprocess") } class <- base::class base::invisible() class(e2) <- base::c("callr_remote_error", class(e2))}, error = function(e) { {
> test_loo_and_waic.R: e2 <- err$add_trace_back(e2) callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { if (!base::is.na(cut)) { callr_data$otel_span$record_exception(e2) e2$trace <- e2$trace[-(1:cut), ] } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", if (callr_data$has_otel) { ".error")) callr_data$otel_span$record_exception(e2) } }}, interrupt = function(e) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", { ".error")) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } err <- callr_data$err}, interrupt = function(e) { if (FALSE) { { base::assign(".Traceback", base::.traceback(4), envir = callr_data) callr_data <- base::as.environment("tools:callr")$`__callr_data__` utils::dump.frames("__callr_dump__") err <- callr_data$err base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (FALSE) { envir = callr_data) base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) utils::dump.frames("__callr_dump__") } base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, e <- err$process_call(e) envir = callr_data) e2 <- err$new_error("error in callr subprocess") base::rm("__callr_dump__", envir = .GlobalEnv) class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) e <- err$process_call(e) e2 <- err$add_trace_back(e2) e2 <- err$new_error("error in callr subprocess") cut <- base::which(e2$trace$scope == "global")[1] class <- base::class if (!base::is.na(cut)) { class(e2) <- base::c("callr_remote_error", class(e2)) e2$trace <- e2$trace[-(1:cut), ] e2 <- err$add_trace_back(e2) } cut <- base::which(e2$trace$scope == "global")[1] if (callr_data$has_otel) { if (!base::is.na(cut)) { callr_data$otel_span$record_exception(e2) e2$trace <- e2$trace[-(1:cut), ] } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", ".error")) }}, callr_message = function(e) { base::try({ if (callr_data$has_otel) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` callr_data$otel_span$record_exception(e2) pxlib <- callr_data$pxlib } if (base::is.null(e$code)) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", e$code <- "301" ".error")) } } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, }, callr_message = function(e) { NULL))) base::try({ data <- base::paste0(e$code, " ", base::nchar(msg), "\n", callr_data <- base::as.environment("tools:callr")$`__callr_data__` msg) pxlib <- callr_data$pxlib if (callr_data$has_otel) { if (base::is.null(e$code)) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } e$code <- "301" }) }}) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e,
> test_loo_and_waic.R: NULL)))59: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", doTryCatch(return(expr), name, parentenv, handler) msg)
> test_loo_and_waic.R: if (callr_data$has_otel) {60: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
> test_loo_and_waic.R: pxlib$write_fd(3L, data)61: if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) {tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) base::invokeRestart("cli_message_handled")
> test_loo_and_waic.R: }62: else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60:
> test_loo_and_waic.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), doTryCatch(return(expr), name, parentenv, handler) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_and_waic.R: quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", 63: compress = FALSE)tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), base::flush(base::stdout()) names[nh], parentenv, handlers[[nh]]) base::flush(base::stderr())
> test_loo_and_waic.R: {64: NULLtryCatchList(expr, classes, parentenv, handlers) NULL
> test_loo_and_waic.R: }65: base::invisible()base::tryCatch(base::withCallingHandlers({}, error = function(e) { { { NULL callr_data <- base::as.environment("tools:callr")$`__callr_data__` NULL err <- callr_data$err } if (FALSE) { base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954342ce592"), base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, utils::dump.frames("__callr_dump__") quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, compress = FALSE) envir = callr_data) base::flush(base::stdout()) base::rm("__callr_dump__", envir = .GlobalEnv) base::flush(base::stderr()) } { e <- err$process_call(e) NULL e2 <- err$new_error("error in callr subprocess") NULL class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) base::invisible() e2 <- err$add_trace_back(e2)}, error = function(e) { cut <- base::which(e2$trace$scope == "global")[1] { if (!base::is.na(cut)) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` e2$trace <- e2$trace[-(1:cut), ] err <- callr_data$err }
> test_loo_and_waic.R: if (FALSE) { if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", ".error")) }}, interrupt = function(e) { { e <- err$process_call(e) callr_data <- base::as.environment("tools:callr")$`__callr_data__` e2 <- err$new_error("error in callr subprocess") err <- callr_data$err class <- base::class if (FALSE) { class(e2) <- base::c("callr_remote_error", class(e2)) base::assign(".Traceback", base::.traceback(4), envir = callr_data) e2 <- err$add_trace_back(e2) utils::dump.frames("__callr_dump__") cut <- base::which(e2$trace$scope == "global")[1] base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (!base::is.na(cut)) { envir = callr_data) e2$trace <- e2$trace[-(1:cut), ] base::rm("__callr_dump__", envir = .GlobalEnv) } } if (callr_data$has_otel) { e <- err$process_call(e) callr_data$otel_span$record_exception(e2) e2 <- err$new_error("error in callr subprocess") } class <- base::class base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) class(e2) <- base::c("callr_remote_error", class(e2)) utils::dump.frames("__callr_dump__") e2 <- err$add_trace_back(e2) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, cut <- base::which(e2$trace$scope == "global")[1] envir = callr_data) if (!base::is.na(cut)) { base::rm("__callr_dump__", envir = .GlobalEnv) e2$trace <- e2$trace[-(1:cut), ] } } e <- err$process_call(e) if (callr_data$has_otel) { e2 <- err$new_error("error in callr subprocess") callr_data$otel_span$record_exception(e2) class <- base::class } class(e2) <- base::c("callr_remote_error", class(e2)) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", ".error")) }}, callr_message = function(e) { base::try({ e2 <- err$add_trace_back(e2) callr_data <- base::as.environment("tools:callr")$`__callr_data__` cut <- base::which(e2$trace$scope == "global")[1] pxlib <- callr_data$pxlib if (!base::is.na(cut)) { if (base::is.null(e$code)) { e2$trace <- e2$trace[-(1:cut), ] e$code <- "301" } } if (callr_data$has_otel) { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, callr_data$otel_span$record_exception(e2) NULL))) } data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-139546f93ef00", msg) ".error")) if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) {}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { base::invokeRestart("cli_message_handled") e$code <- "301" } } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::invokeRestart("muffleMessage") NULL))) } data <- base::paste0(e$code, " ", base::nchar(msg), "\n", }) msg)}), error = function(e) { if (callr_data$has_otel) { { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) NULL } NULL pxlib$write_fd(3L, data) } if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") if (FALSE) { } base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } })}), error = function(e) { { NULL NULL base::invisible() }}, interrupt = function(e) { { NULL NULL } if (FALSE) { if (FALSE) { base::q(save = "no", status = 1) base::try(base::stop(e)) } } base::invisible() if (FALSE) {}) base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { {
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35:
> test_loo_predictive_metric.R: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_predictive_metric.R: pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: outer(X, Y)
> test_loo_predictive_metric.R: 2: -theta %o% x
> test_loo_predictive_metric.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_predictive_metric.R: 14: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, method = "psis")
> test_loo_predictive_metric.R: 19: psis.matrix(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 20: psis(-LL, r_eff = r_eff, cores = 2)
> test_loo_predictive_metric.R: 21: eval(code, test_env)
> test_loo_predictive_metric.R: 22: eval(code, test_env)
> test_loo_predictive_metric.R: 23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: doWithOneRestart(return(expr), restart)
> test_loo_predictive_metric.R: 29: withOneRestart(expr, restarts[[1L]])
> test_loo_predictive_metric.R: 30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_predictive_metric.R: 32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_predictive_metric.R: 42: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_predictive_metric.R: 45: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 46: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 47: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_predictive_metric.R: 48:
> test_loo_predictive_metric.R: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 49: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_predictive_metric.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 51: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/RtmpnD9Klp/callr-fun-13954636a4b90"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/RtmpnD9Klp/callr-rs-result-1395457870ded", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64