7f37be1b7e17689c91dd16007ce82c75 *DESCRIPTION
fe1b1591d0d482b754b3a97297f0ec24 *LICENSE
0dcc6b78b52d845dea60ec044502d39a *NAMESPACE
fc5dbfd3932aa119e86320e59d1426a0 *R/ATAC-seq.R
38f0a2cc8ad73af14590fe28e6a22c61 *R/GSE129785_SU008_Tumor_Pre.R
7e05f308a0bf0618ae7ea455ee3a18ac *R/SHR_m154211.R
310a74d22642363170ccd0f213c24e9b *R/cnv.R
dcf347b4ba054bd9f69b76f2eb3873b3 *R/inferploidy.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
4ef315e449ada240b8649b32a523df73 *README.md
f61db891eb928123aba4412ca322f508 *build/partial.rdb
860b73d61bcb1301ca77c340dbb8df2b *build/vignette.rds
0955c2ca41e74eaf12fdbfdc486f7776 *data/GSE129785_SU008_Tumor_Pre.RData
7886cec492858d70b24fd307b4f62503 *data/SHR_m154211.RData
fbf592efa52d777b3a9d9e3dac8267d0 *inst/doc/CNV.R
62cf48c971fc4ca05a2268917601abaa *inst/doc/CNV.Rmd
6c5f2f46699eec5204f293071f5dcbc2 *inst/doc/CNV.html
de67a4866e72f9671a9015d645fa6b2e *inst/doc/intro.R
82e2fd5f819e8f24efa792a03e3f756d *inst/doc/intro.Rmd
cc6f6666a5b79d1595b3db2d67d76c2e *inst/doc/intro.html
b775e879bd07c323c23300b9b349e3d9 *inst/extdata/SHR_m154211.10cells.chr19_20.fragments.txt.gz
df2c68268721f22d7339735ac35045f0 *inst/extdata/SHR_m154211.10cells.chr19_20.fragments.txt.gz.tbi
949feedb1ca99e77bc941c381f462eb4 *inst/extdata/simpleRepeat.chr19_20.txt.gz
d546cb6106793b13d5f5de13a32e6828 *inst/perl/samtofragmentbed.pl
916e68b3e1af5e6ce0e5784c61970c17 *man/GSE129785_SU008_Tumor_Pre.Rd
3fbff795a11313181fb05a7f99a3f963 *man/SHR_m154211.Rd
4ff38d7ddefc3ab3ca901c68998f3485 *man/cnv.Rd
8ff9141276376ff62bf64b4937f78195 *man/fragmentoverlapcount.Rd
774d9de8e95aa151215efcd304549d41 *man/pipe.Rd
bf589dbbb7ed31f4398ba6b927930a3d *man/ploidy.Rd
1e5e7652e834c2f8d61199c6b50bf3c4 *tests/testthat.R
b775e879bd07c323c23300b9b349e3d9 *tests/testthat/testdata/SHR_m154211.10cells.chr19_20.fragments.txt.gz
df2c68268721f22d7339735ac35045f0 *tests/testthat/testdata/SHR_m154211.10cells.chr19_20.fragments.txt.gz.tbi
a2a0f0ab986a1fc7757c2016c6617ee1 *tests/testthat/testdata/SHR_m154211.10cells.chr19_20.result.RData
316d0bbeb4eb635105e4224bbcaef630 *tests/testthat/testdata/SHR_m154211.fragmentoverlap.RData
8d92a563e5c3f7e8521045f028eb5b80 *tests/testthat/testdata/SHR_m154211.result.txt
949feedb1ca99e77bc941c381f462eb4 *tests/testthat/testdata/simpleRepeat.chr19_20.txt.gz
467a1fb2ff74afbd42942307c4d88369 *tests/testthat/testscPloidy.R
62cf48c971fc4ca05a2268917601abaa *vignettes/CNV.Rmd
82e2fd5f819e8f24efa792a03e3f756d *vignettes/intro.Rmd
