adb1414a60da9518740d3e6f5d220087 *DESCRIPTION
c107903558e1aa743b69a9ca01081fd6 *NAMESPACE
82fc8cccbbc42521398a25def4a9ec86 *R/add.phenos.R
ea7fed5e4f0e30060a18ef2d4ed9957b *R/big.R
6c3ad888261560097048918d0e3b41f1 *R/cmst.R
e2b4efcfb7c1d6fd695444468acf2221 *R/highlod.R
d9784b632e46e5bc66c3169a0d616500 *R/hotperm.R
c263e057d5ffd18f2bc7fdabf2bf2485 *R/hotsize.R
406e1dcd897124c59a6ccbae94ddeb7e *R/max.R
48aa0164f6bb853c762eecec7d1426d3 *R/multiple_testing_sim_functions.R
2691e0df2e1c4ad991982cee548e06db *R/neqtl.R
bcfd67f0fe079057f3e2bd7b798c8c85 *R/parallel.R
907302dddcb950483142bec0e1eb9f79 *R/plotcmst.R
43e15b98d5a239a39ff51bad8eeea7b3 *R/ravel.R
caa27fc5b3a369254761fa583adb8588 *R/roc.R
76287a958e5977b44ab37f9f96aed0a7 *R/rug.R
697902bf598d08d4cdaea474ca5d0d20 *R/runningmean.R
d2cd978a765a5ce99c54c3423e7c8084 *R/simcmst.R
746436731497f5d6fe60d65df69bfdb6 *R/simhot.R
123054de7b41a866df5df556bf947617 *R/sliding.R
d4c61fe42332c657d163ba7656e6d887 *R/study.R
0a0d3b612706ede8c7094f3dff86ff14 *R/utilcmst.R
995b41d6b7a8708c9b5a5155ed0bd0bb *R/utilhot.R
0aa25b23c8a20a0612122627828c0665 *R/westwu.R
d41d8cd98f00b204e9800998ecf8427e *README
2580daca6395a8134ecac024cdd7d427 *build/vignette.rds
ce8e0880fc38da5885a6d3fb58b0dc8c *data/CMSTCross.RData
3e1da9c944a86de2d916c2afffe3ccfe *data/hotperm1.RData
89bff8163dbfdb0b2e5fe28276ecd4fa *inst/deprecated.R
b1ed4a108fd630a6af23aa3292928b55 *inst/doc/cmst.R
24564426040a80f5998c28e64b7ee028 *inst/doc/cmst.Rnw
ec7c7ab15bbbf0579e491e3c07c45170 *inst/doc/cmst.pdf
a0b83727aafc7aaee065f854be8fc1a4 *inst/doc/qtlhot.R
bc396dba92d51ec11f3e963e7965a799 *inst/doc/qtlhot.Rnw
660af71863da439e5fe448256dccbc7e *inst/doc/qtlhot.pdf
11704113157929b53b0e2c5ba015ad3e *inst/notes/cmst.txt
52d8cbf0da7b5bdc67b82665b7e8c4c1 *inst/notes/code.txt
c15b74d7121a2ddbe21306b65ccd3b64 *inst/notes/perm.txt
6d4c95af46a1a4bcc321d888beccd874 *inst/notes/plot.R
1f353aa7e5840f8c82884698969b6b28 *inst/notes/vignette.txt
4f5aed9c48c35420d2fcf792196707d4 *inst/parallel/Phase0.R
8178038dca48891725c7d1386beb4b11 *inst/parallel/Phase1.R
5b4f049ad59aae7ee7efd58ae028a269 *inst/parallel/Phase2.R
817f9a45083324b22e3ca1fc93eba97e *inst/parallel/Phase3.R
2558f59c4c19ef51de1b21a4cf6f8d51 *inst/parallel/ReadMe
c031e3c89986ff8dbe7ac049bb582c90 *inst/parallel/SOAR.phase0.R
a5c3774fa0c5b298161fd419ec5bcb50 *inst/parallel/SOAR.post.R
0eac83f946b60f56fe187ddcd4a7760f *inst/parallel/cross.RData
8b9712f8ce05f9005356e0b06798357c *inst/parallel/params.txt
be0c94b6582c2f5f503730bb94833b21 *inst/parallel/runparallel.sh
684702e9836a1db10b930c62d5f3d36e *man/CMSTtests.Rd
f589a8745f5a6ad96d2a6a5b680fccd4 *man/GetCandReg.Rd
a0d9688690f56d672a90cec7117b0a65 *man/GetCommonQtls.Rd
aafb4a629861f7a577b99518b7d4be12 *man/PrecTpFpMatrix.Rd
efb799895e471cdd70bc2d2f30545c7a *man/SimCrossCausal.Rd
692111bb7328f17b403106ab8dde4907 *man/add.phenos.Rd
f65e117bea18f3231f310f4e0fc07841 *man/filter.threshold.Rd
04da9aa72c61c2dfe1efe5bac7ced679 *man/highlod.Rd
9e9cc535d12500f25c28790b3f730967 *man/hotperm.Rd
7780b3bf6da7bac3831b7dbdb600f72b *man/hotsize.Rd
c7ca914d7fc9cf321a7e07750fcf1f32 *man/parallel.qtlhot.Rd
3da742be31fe06f70772508c1a51a2d6 *man/sim.hotspot.Rd
42d951c0229a8e83cc216a2e834e204f *man/westwu.Rd
7ab4aae0ebff42ce151372d97076416b *src/Makevars
7c22b1b500cab25872924e218f1645f5 *src/register.c
038436d92771c38855a79685ab12df23 *src/runningmean.c
22acf45d7a3bbdf3f9a177f9987bd1a6 *src/runningmean.h
24564426040a80f5998c28e64b7ee028 *vignettes/cmst.Rnw
bc396dba92d51ec11f3e963e7965a799 *vignettes/qtlhot.Rnw
eb8b95adf890e0b10c31054ee13a2467 *vignettes/savedperms.RData
