fab21a61f512aeefa10e06de64ac825f *DESCRIPTION
702dc4161baa1a272a72b262baa7a1d5 *NAMESPACE
74735026df73bf751402dd7a7bec4420 *NEWS.md
b323e2d2cc586acc1553b294a4718f7a *R/GenericFunctions.R
3ab98a96f15026f21442395ae8dcff9c *R/HypergeometricTest.R
12cbfc7311018f7e86166c0f3c08438c *R/Methods.R
ea938f7e21afa91dfe508150c90df409 *R/ORA.R
f24407d0efe866c4f0f1894de118cc6b *R/Plotting.R
462de0b4c702cd967b6d67430adec720 *R/RankedBasedTest.R
ce61a1a0fdc864107a2e5f5ad7eb3ee8 *R/RcppExports.R
a14415b7c671caae1200b85fab87e73e *R/SetBasedEnrichmentTest.R
976db2c6750e491a46a42652a1f6768b *R/SubramanianTest.R
e4f579a466076e80d2ff75a454a23d6b *R/Utils.R
b7218913ac295e722389b9cea318b9ba *R/Zzz.R
389f5832885321178fd661b3cbac009d *R/set-based-enrichment-test.r
6cbe85c2c6124d4efe1ada1c92bf5f48 *build/vignette.rds
8f3102304296e9b3c69d35f9f9bab501 *inst/CITATION
8fbe9aa9fb40d1a95743b3248c9e1715 *inst/doc/mulea.R
c6c86dd1d3a3628ba93247099f059f9b *inst/doc/mulea.Rmd
6f97ed3ab531c0f0f4f6a72d530a715f *inst/doc/mulea.html
c7d2dd7fee1514fa1451e781afd3f603 *inst/extdata/GSE55662.table_wt_non_vs_cipro.tsv
46f27c4f071cd43755bc353da39e5e47 *inst/extdata/Transcription_factor_RegulonDB_Escherichia_coli_GeneSymbol.gmt
15b9861eab5afa610cb99599b4b15a4f *inst/extdata/background_set.txt
d022d4476c7a97eac860029cebfc9add *inst/extdata/model.gmt
31fbc357474fed9eb6c1a68fd8e18fe0 *inst/extdata/ordered_set.tsv
dfc0ad24c034e284387772c7fcf95406 *inst/extdata/target_set.txt
fedbc15b934e180c4fe90b695435ffda *man/MuleaHypergeometricTest-class.Rd
f599ca01e0d1f223b24982faada9c64a *man/SetBasedEnrichmentTest-class.Rd
5f73c0bbecf642e3e42ed0719ced60c5 *man/SubramanianTest-class.Rd
4c76b7a1f4386acdfda62ec2642c40e8 *man/figures/MulEA_logo.png
52812f4b3b242d251aa4e1776f218ca9 *man/filter_ontology.Rd
65c60328cc34ccc2cc85fa34c72b9cd7 *man/gsea-class.Rd
e7d5a252fefc9da523d65558c4e757f9 *man/list_to_gmt.Rd
62a1a129a914b64169ab90a7e974b9d0 *man/ora-class.Rd
8342ffabe80b9b44db016ddafbb645ae *man/plot_barplot.Rd
66c3b8bcd70df25f0f55157db2cd6458 *man/plot_graph.Rd
179e1ce97b6925ceebcc23a1b44c67af *man/plot_heatmap.Rd
a75d56a627347fa6178a42051b2bf5db *man/plot_lollipop.Rd
787fabaf5f4ee16a9d81358703985d3d *man/read_gmt.Rd
093a9f868b8c008550f35759f9e3e68d *man/reshape_results.Rd
29f7512a2825b8477d1001290d580774 *man/run_test.Rd
31e5d9f80fc96f4d3750e23773368fe4 *man/write_gmt.Rd
147efea523728d42eb1ca432729bb9c6 *src/RcppExports.cpp
a97e92249d86e1aa0affbf197b53e34f *src/set-based-enrichment-test.cpp
1d6fd125b2de326a4cdc1a3f992a65b4 *tests/testthat.R
22f9c298edb081ec1d04e388b15ebcb2 *tests/testthat/testHelpersAndUtilsTest.R
a9e85a45bab317e762b5d2d0699a0967 *tests/testthat/testHypergeometricTest.R
2c4fc5bd5b617e84f9fcd2e162b0f7f8 *tests/testthat/testPermTest.R
5049b308ce4065e9df920910e8bb2706 *tests/testthat/testSubramanianTest.R
7491a25de4993541629b6e95159f8c14 *vignettes/Regulon.png
f7993961c992cc0a0f0aef1bb9eaf40d *vignettes/Venn.png
a848f76948b9b3eba61e15955e735f29 *vignettes/geo_main.gif
c6c86dd1d3a3628ba93247099f059f9b *vignettes/mulea.Rmd
