8cf3e191528e5cbd78c402da4b1cd006 *DESCRIPTION
ef2b249f631f940fa8e817101d43ceb0 *LICENSE
cdb5661c9b810ba948c8b0e282f97511 *NAMESPACE
bc551a23be7aa93dac708671cec62dad *R/cooling.schedule.R
496930367b82d215149041473dc1c19a *R/fancy.plot.R
359e47075c8891bd280da2b61eb6afa7 *R/globals.R
7250e74f6c6e764180a2a42a7362cc2a *R/gxe.test.R
2ec936cb5e62040b1aaed6814acffca5 *R/logic.bagging.R
821cf188355a9336c80c84c6e08fcf0c *R/logic.boosting.R
a4c6f84566d70f25bf11b1930df0bb11 *R/logicDT.R
7d940c65887de24f6d9b8c51a7cb4462 *R/plot.R
a7beb212087fa47e357a4f21ccf63b70 *R/print.R
7ad114bd0d62d2e1eca0226976f9630c *R/pruning.R
db501f60d87d7850036caa8e69d05471 *R/simulateGRS.R
45179cdca8a3aebe6fc7514baded3fbc *R/simulateSNPtree.R
386917a0489dabf44dfd2fe4d47bbb44 *R/tree.control.R
bbd5b41bb10b8373605f8d38e14ce624 *R/utils.R
1b2c7aeb15a2dd8dc5d9c3203277c2db *R/vim.R
35ec1359fbac07fc26b6ba0f20fd8c5a *README.md
f8d0d6417c9e42826251b7f14f56ad77 *build/partial.rdb
f9bacfc3ae1d5f0873c961a21ce8074a *man/bestBoostingIter.Rd
7b8127fa5078e2a3104ff6ce17027a9b *man/calcAUC.Rd
2583a61959c54b3aafb51417380ac853 *man/calcBrier.Rd
d9bb771957831c2a7d77f6f3e34d2d49 *man/calcDev.Rd
a6b4373f0908e1e946d07edb0fdd72d8 *man/calcMSE.Rd
af56626795a94b3f51805ee708f776e4 *man/calcMis.Rd
4255c29928430c271087ee5cd31fb729 *man/calcNCE.Rd
cf637ba3d0b7918bef674ca8933bca02 *man/calcNRMSE.Rd
abf26101b7f0b5aed0d1a1aafccd9cd3 *man/cooling.schedule.Rd
b0a48fb3d3ff579807e2c59f820122d7 *man/cv.prune.Rd
6fafad66b598bf55deb619ccf0ede571 *man/figures/README-unnamed-chunk-11-1.png
008387e6cc1c8945b9eac3f468a39882 *man/figures/README-unnamed-chunk-6-1.png
c66c7f68140c578204966e76acbedab0 *man/fit4plModel.Rd
8627dc8db87910ba6c406a1ae4650ddc *man/fitLinearBoostingModel.Rd
220fdcb18874378d2edb56e50233e8c8 *man/fitLinearLogicModel.Rd
dcdf2145565074e8428d5d42780e8800 *man/fitLinearModel.Rd
43675f2c4d0671fc6323ef543b69e1b8 *man/get.ideal.penalty.Rd
86cc5ec9bc129f659f4483db27386401 *man/getDesignMatrix.Rd
fcf9c8663ea886201303153b58f06063 *man/gxe.test.Rd
8b6d373a019d4433501a4b8a2559540d *man/gxe.test.boosting.Rd
d1bc98914bf5e72e5adffaf4860addaf *man/importance.test.boosting.Rd
e03342ba047784afef76207bf8e17081 *man/logicDT.Rd
5a1ca8f8624ad0432f64679a60fc76d1 *man/logicDT.bagging.Rd
4e79b1c9bebb4d428463e11876017e33 *man/logicDT.boosting.Rd
8e39176f7b2d999aefa56bc0ab9db23c *man/partial.predict.Rd
7d57a93c9df0a1bd48f5f708b6b1000d *man/plot.logicDT.Rd
6b8cd66fe64461fba1d5154eb010cc27 *man/plot.vim.Rd
b974bb16c564c8a55793d68237f2c93e *man/predict.4pl.Rd
8f40101595cf26cc0bd667786753654c *man/predict.linear.Rd
28773110afd2b06f47a9204551b54dad *man/predict.linear.logic.Rd
15bb42d7f24aa558310b22e76ba4d633 *man/predict.logicDT.Rd
d94a6b4cf3ccdb0a895e9b99376171af *man/prune.Rd
9b0060a92a1456aa5d7e91ad840b691a *man/prune.path.Rd
8da4d50aba840e9b72ab7615f1176575 *man/refitTrees.Rd
5fe296e6c8ac5ccec27bb314697e223e *man/splitSNPs.Rd
109d35bd506686635b649507e5ad0010 *man/tree.control.Rd
14bc430c1ad8f9089bd3e5ba1bf813b1 *man/vim.Rd
1fcf7d18ffdd54fdb1a08ce5b0723b57 *src/gxe-test.c
4abb95f01c2f18778e85da466b1cd755 *src/gxe-test.h
6269865bd86f82432fbddf46f73d97d7 *src/logicDT-init.c
64c4949f6b2a990d0179f5cca7103681 *src/logicDT.c
b45587d0ec95e855e97f1c0b9de35983 *src/logicDT.h
10048b3c53a2653a5353962ecab2db68 *src/pruning.c
28d1989f8b70597c1ad36fec9c07936e *src/pruning.h
47e59f538e90a2ad0323382913592479 *src/sa-greedy.c
17048e8019cc1cd69cc269ccbe2bdf85 *src/sa-greedy.h
