2d62c695c8e172a546b91b398acb0eb9 *DESCRIPTION
c70d2eb510624dcf4bef020c8375e38a *NAMESPACE
316c8864a240722fce21e1df1e303c41 *NEWS.md
d1a1615a2bfdd5e5b42a0c7d84010e15 *R/all_trees.R
0c88eb65861fe435d255239ddcc6f492 *R/apicomplexa.R
640b031840531cb3d1df530ae41094b5 *R/as.matrix.multiPhylo.R
30d05101ad54f8e615f645edc4107a14 *R/as.vector.phylo.R
87483da908f0c9596a92f9024c84e9b8 *R/assignment_finder.R
2e7459a1ff4528599096bd3ae3c9d3e2 *R/coef.cv.tropsvm.R
7722a96a74875faef8f04adaae101503 *R/coef.tropsvm.R
f63d7c41cd923c8f6e77dfba465838d8 *R/cv.tropsvm.R
38754a404fcabf76cdf6ca373e8c7124 *R/dets.R
7bcbe4d8b4a05b81793f4e448b8a0c86 *R/linsp_to_poly.R
f27904ea57c18869fecec94bcd36330f *R/lungfish.R
cec3b152511350d1e20a4af225f28373 *R/plot.tropca.R
d74437129242ffaac4daea0997f0b719 *R/polytope_iso.R
36f9c951a97d8850c0772ac5c8a68c34 *R/predict.cv.tropsvm.R
65c2954fe09d97f2b1059d0c3c733b92 *R/predict.tropsvm.R
8a50da2589c142b83440dfe195a88a16 *R/read.nexus.to.data.matrix.R
dc7565b6add07d2c7a54e90b33c5d3bf *R/read.tree.to.data.matrix.R
d707b66bfc1453e31eb1ef764cea338f *R/sim_trees.R
0aaa993ea7c1d5346b2fc25d4f3d4ae7 *R/summary.cv.tropsvm.R
6e7f04ded03f8d9654b49ae9b4e6f13e *R/tropFW.R
360d026cb44dc975776fde3b420452ba *R/tropdet.R
951fa70bc53f5a1b92b53e4e7252fa4e *R/troppca.linsp.R
00e18da52fbb47362a609a9c55811b9f *R/troppca.linsp2poly.R
daf27db42c30dd31c07c4c4e6b0841b5 *R/troppca.obj.R
c1f84bb6061d0946853d4010d1443c90 *R/troppca.poly.R
b5e9709cec070a777baa8d24d7fdd689 *R/troproj.linsp.R
02abedc5357b84d101928de6ea4b8500 *R/troproj.poly.R
fb22b52988646d03da2a46361114d317 *R/tropseg.R
3c72c4a6f965835363f189e6de647573 *R/tropsvm.R
055f71850901707947e87917e4cbc466 *R/tropsvm_helper.R
9a4fb658343c26e025db7e3ec387eccb *README.md
39ca7452eb626ce0d0c3910a32c08e8a *build/vignette.rds
9f2c147023dfe70b26f1e636f4ceb298 *data/all_trees.rda
699b540d1d338feb457ea453abbeb133 *data/apicomplexa.RData
7039621348da3b2beaaa24f9d119870a *data/lungfish.rda
6f9fe49f1ca4387cad7f0932eb119f46 *data/sim_trees.RData
2f20823e1afdf3b995a00c97c60bab92 *inst/doc/usage.R
a85a50b7364b619dd57dc2ffa104751c *inst/doc/usage.Rmd
d2d4d2e9fd52c1ca0583fa6a12dc0ddb *inst/doc/usage.html
72084175b9996fa45086e2fc8f0ee7e0 *man/all_trees.Rd
98466ede9cb63e4d139939cd21931763 *man/apicomplexa.Rd
11261584e030e647ba571ca7e7930531 *man/as.matrix.multiPhylo.Rd
e6cce65b3156d47150e381da535807c5 *man/as.vector.phylo.Rd
ebdab8436a696957c753a6da4b8dd659 *man/assignment_finder.Rd
8169e51db305446d6b3835a9be09af22 *man/coef.cv.tropsvm.Rd
66332fe55458761370e7a161ae2b3b86 *man/coef.tropsvm.Rd
a7140b0e59e544ac15dd0790a6b30032 *man/cv.tropsvm.Rd
92fb171104c042057e368003ced6edc5 *man/dets.Rd
81a48e96a1d2d9820bce1603b1bef321 *man/linsp_to_poly.Rd
f4302e99e7f6860fab796bca8c3e6db6 *man/lungfish.Rd
fec28408e316c8de81905d09a6211555 *man/plot.troppca.Rd
bab8814e0937bc2e8a4aae965fe7af16 *man/polytope_iso.Rd
b7c2aad6a08db78ba16252e16ca459c8 *man/predict.cv.tropsvm.Rd
90396aa8da56e42280f03a0d5ccaecc9 *man/predict.tropsvm.Rd
a4c89c80e6ee6dd8bd60e4f737474367 *man/read.nexus.to.data.matrix.Rd
7b648cf179773f41881fed0ec1c42a09 *man/read.tree.to.data.matrix.Rd
171f7b16ed26dbac8a00deeaa6bc1b91 *man/sim_trees.Rd
2abd7c5384f9e2ca153a35b26787be75 *man/summary.cv.tropsvm.Rd
f1fb62b81a8191e0a123c0b1893546da *man/tropFW.Rd
92faefed918eea1c512db11dfdfd32b0 *man/tropdet.Rd
05816ca98f2462e1ba215e911178a6a6 *man/troppca.linsp.Rd
90d1b1bfa916a3140dd429f5f5ad18ee *man/troppca.linsp2poly.Rd
6350d71f1ead119daf67d1ec1826c0da *man/troppca.obj.Rd
374a65cbf53ed82fc1198a3cba0c7939 *man/troppca.poly.Rd
920c93e4363ca0c38f90477d6f1e3321 *man/tropproj.linsp.Rd
a5271d81b3b14dccf6934eeae3119fb7 *man/tropproj.poly.Rd
eb04515088fc33fb5a234a7f4f36b8e6 *man/tropseg.Rd
c814a7cba99a8c585071038dfb1be073 *man/tropsvm.Rd
17fde05573fe01559667571ff4083250 *man/tropsvm_helper.Rd
806558bb2c823530054f2d815c6d7ecf *tests/testthat.R
225e3812b897786befc574f805c96dc2 *tests/testthat/test-as.matrix.R
db3f36fb8148d114ca0da83fed48e961 *tests/testthat/test-projection.R
a85a50b7364b619dd57dc2ffa104751c *vignettes/usage.Rmd
