1fd5a231345a2517dbfdfe5dd7532386 *DESCRIPTION
7b0c094e244aff3d1a0e2f0d7670e218 *NAMESPACE
da34ab39ef828bf4b29294d6ba0ac592 *NEWS.md
8a113081688e5428e5787b8fa1cde700 *R/EMMA.R
28c2458cdc058a7d33051aeceddbec0e *R/GWASHelp.R
f54c897f23a7434cd9563c1ad0776a0a *R/RcppExports.R
d6ecb628ce4e023c27fe9dcf08b00ef5 *R/chkFuncs.R
5967b2ae3969365ac7c157cc0518272e *R/codeMarkers.R
c98045a791875d35ec5af5ce400daaed *R/createGData.R
e6eafaf94e41873db1afb142091f0af1 *R/createGWAS.R
312a8c36c5457836f1b5a5989525b013 *R/data.R
b51fb343d0691f6cd8da1b43cdad023d *R/fastGLS.R
f8605c978525fd089703b1bf691228a8 *R/kinship.R
1dca36001bb257bc5bfaa46f47b2076a *R/manhattanPlot.R
81fe2b19c76898e0e092adf0a0fb1a3e *R/qqPlot.R
316be5772b96f4eea3fc63b53ebb4879 *R/qtlPlot.R
5c8317d17d14b741403f460c56e3bd9f *R/runSingleTraitGwas.R
0875c7b5743f5fa6a401a2f92e9ca266 *R/statgenGWAS.R
62a26bd9c5621be66d4cc464202f21b3 *R/sysdata.rda
f8098db55559f81dd6140b88c7d60f15 *R/utils.R
5692e3a4c30c1979ae6cbde404a84b42 *R/zzz.R
3940c02f93573c89b18f3108396756b4 *README.md
b9a393a322edf40a97cd84af8ad9b2d9 *build/vignette.rds
6eeeb1e94b312355adcab7f36696cc0f *cleanup
e34eaff479f9431c4dfd19c06f26568f *configure
b794859389aa8a0ade94cd14f8c6205d *configure.ac
64e9b54253a2472db98881bfeaf1aca0 *data/dropsMap.rda
24a1ce114496bb20f88282c6848f9a56 *data/dropsMarkers.rda
c17bdc97cc678428e7da689aa912a26a *data/dropsPheno.rda
7e8b70df75e4b07424e29c3c029e4f1c *inst/doc/GWAS.R
377b9dcb5552084372f380ab89613293 *inst/doc/GWAS.Rmd
0cf85dd60c5fa4370f60c0f9b4258b4c *inst/doc/GWAS.html
9eb5f003b27c7cd79f717bd30b7db5ea *inst/extdata/testData.RData
ea98b902fe469c5a6b6e1a28fb08e3d6 *inst/java/beagle.jar
32c157f8b3aba2d3d1419d3d295a4fbd *inst/tinytest/test_GWAS.R
f862a1e79159241beb012fb15352e4be *inst/tinytest/test_STG.R
189e20c3daeb5486898c9d989a02bf87 *inst/tinytest/test_STGHelper.R
334a55f1de01128bfa3c64fffc689f3a *inst/tinytest/test_STGoptions.R
b842765d0b6cb05379de1b29a533987e *inst/tinytest/test_chkFuncs.R
59d3d40d727ff66c921b14d7b829a92d *inst/tinytest/test_codeMarkers.R
d6c0bd9a7da0a2062a284964a4c75fd1 *inst/tinytest/test_gData.R
03d85dd7a22284ad6f4f17f584b3957a *inst/tinytest/test_kinship.R
a88de130dc85328ae060491a992ebe90 *inst/tinytest/test_plots.R
b448b0b49d7b0c938ba02514961828bd *inst/tinytest/test_utils.R
62a26bd9c5621be66d4cc464202f21b3 *inst/tinytest/testdata.rda
6f14213ffbe8b3d364d8304157ce2b4c *java/README
e54797997ca3e396e00a35b66d20035f *man/codeMarkers.Rd
42129e8ff6a9853423e154abadab376d *man/dropsData.Rd
eab8d5776c5bbb079f1661fde2cb5453 *man/figures/README-manhattanStg-1.png
e5bb0b3712963db608fcdb9ebf1ab47a *man/figures/README-qqStg-1.png
67a4967d31cc4b18d58dfdc92914d82f *man/figures/README-qtlStgNorm-1.png
c20518f0d7fe4074c8d5b1876d580f0d *man/gData.Rd
d44d0d0b64a4b720b2ce407d65fded5b *man/kinship.Rd
1987fdee9bc73f0ab3cf83db122fbe5e *man/plot.GWAS.Rd
5c56b5b344fcf1092cc951c3b8e27d1a *man/runSingleTraitGwas.Rd
9f5a6cbf4786de0ed483a9819b2486a3 *man/statgenGWAS-package.Rd
f173723f573504cf7ad8352247ec99d8 *man/summary.GWAS.Rd
5cd203372a3b7e10855d9d893d9affe8 *man/summary.gData.Rd
9984a9660f1bfdbb1437242cca94781d *src/EMMA.cpp
8098ef98fba0596198a48212223bf20b *src/Makevars.in
61059660eb073d93e00e8ee054237071 *src/Makevars.win
67aec2ea1c218d4f581449d50bec0a36 *src/RcppExports.cpp
29f32769d6164e1c1d4e1506528bf4f8 *src/codeCharMarkers.cpp
8230bea2a40eb150c44b5d4da288c83b *src/fastGLS.cpp
768c72ab56ca4f806be7293665e35385 *src/getThr.cpp
dca120fb5d1c68c557fbd57ebd7f021c *src/getThr.h
69cb6afc57a670c0468fde0dbb80b42d *src/kinship.cpp
94943cff5669015525cecaf1b43fe195 *src/utils.cpp
74d10307362652a2ed9c8580bbc3db38 *tests/tinytest.R
377b9dcb5552084372f380ab89613293 *vignettes/GWAS.Rmd
297acf5eb8ce7e431be27c639234d60f *vignettes/bibliography.bib
