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                                         SaTScan v9.6
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Program run on: Sat Mar  9 08:03:43 2019

Purely Spatial analysis
scanning for clusters with high rates
using the Discrete Poisson model.
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SUMMARY OF DATA

Study period.......................: 2000/1/1 to 2000/12/31
Number of locations................: 281
Population, averaged over time.....: 1057673
Total number of cases..............: 552
Annual cases / 100000..............: 52.1
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CLUSTERS DETECTED

1.Location IDs included.: 52, 50, 53, 38, 49, 15, 48, 39, 1, 37, 16, 44, 14, 47, 40, 2, 13, 43,
                          51, 45, 17, 11, 12, 3, 46
  Coordinates...........: (42.0838,-75.9898)
  Semiminor axis........: 0.058
  Semimajor axis........: 0.087
  Angle (degrees).......: 90.00
  Shape.................: 1.50
  Population............: 99685
  Number of cases.......: 93
  Expected cases........: 52.03
  Annual cases / 100000.: 93.1
  Observed / expected...: 1.79
  Relative risk.........: 1.95
  Log likelihood ratio..: 14.772705
  Test statistic........: 14.181797
  P-value...............: 0.00016

2.Location IDs included.: 89, 88, 87, 84, 90, 86, 92, 85
  Coordinates...........: (42.628,-76.1041)
  Semiminor axis........: 0.13
  Semimajor axis........: 0.13
  Angle (degrees).......: 0
  Shape.................: 1.00
  Population............: 34083
  Number of cases.......: 38
  Expected cases........: 17.79
  Annual cases / 100000.: 111.3
  Observed / expected...: 2.14
  Relative risk.........: 2.22
  Log likelihood ratio..: 9.019716
  Test statistic........: 9.019716
  P-value...............: 0.023

3.Location IDs included.: 113, 116, 117, 220, 115, 123, 112, 114, 122, 124, 118, 111, 121, 133,
                          125, 120, 132, 110, 218, 134, 119, 219, 139, 126, 131, 138
  Coordinates...........: (43.0765,-76.1376)
  Semiminor axis........: 0.023
  Semimajor axis........: 0.046
  Angle (degrees).......: 60.00
  Shape.................: 2.00
  Population............: 61795
  Number of cases.......: 57
  Expected cases........: 32.25
  Annual cases / 100000.: 92.0
  Observed / expected...: 1.77
  Relative risk.........: 1.86
  Log likelihood ratio..: 8.311580
  Test statistic........: 7.388071
  P-value...............: 0.121

4.Location IDs included.: 62, 64, 67, 65
  Coordinates...........: (42.9637,-76.528)
  Semiminor axis........: 0.061
  Semimajor axis........: 0.061
  Angle (degrees).......: 0
  Shape.................: 1.00
  Population............: 24571
  Number of cases.......: 25
  Expected cases........: 12.82
  Annual cases / 100000.: 101.5
  Observed / expected...: 1.95
  Relative risk.........: 1.99
  Log likelihood ratio..: 4.651839
  Test statistic........: 4.651839
  P-value...............: 0.768

5.Location IDs included.: 170, 171, 166, 167
  Coordinates...........: (43.0068,-76.1412)
  Semiminor axis........: 0.0072
  Semimajor axis........: 0.029
  Angle (degrees).......: -60.00
  Shape.................: 4.00
  Population............: 12214
  Number of cases.......: 17
  Expected cases........: 6.37
  Annual cases / 100000.: 138.9
  Observed / expected...: 2.67
  Relative risk.........: 2.72
  Log likelihood ratio..: 6.154083
  Test statistic........: 3.938613
  P-value...............: 0.931

6.Location IDs included.: 266, 281, 265
  Coordinates...........: (42.4722,-76.4635)
  Semiminor axis........: 0.017
  Semimajor axis........: 0.026
  Angle (degrees).......: 90.00
  Shape.................: 1.50
  Population............: 8063
  Number of cases.......: 11
  Expected cases........: 4.21
  Annual cases / 100000.: 136.1
  Observed / expected...: 2.61
  Relative risk.........: 2.65
  Log likelihood ratio..: 3.820132
  Test statistic........: 3.667327
  P-value...............: 0.974

7.Location IDs included.: 106, 103, 102, 77, 230
  Coordinates...........: (42.7801,-75.7262)
  Semiminor axis........: 0.087
  Semimajor axis........: 0.35
  Angle (degrees).......: -45.00
  Shape.................: 4.00
  Population............: 15576
  Number of cases.......: 19
  Expected cases........: 8.13
  Annual cases / 100000.: 121.7
  Observed / expected...: 2.34
  Relative risk.........: 2.38
  Log likelihood ratio..: 5.369233
  Test statistic........: 3.436309
  P-value...............: 0.990
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PARAMETER SETTINGS

Input
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  Case File        : /Users/jfrench/Dropbox/Code/GitHub/smerc/tests/satscan_ny_cases.txt
  Population File  : /Users/jfrench/Dropbox/Code/GitHub/smerc/tests/satscan_ny_pop.txt
  Time Precision   : Year
  Start Time       : 2000/1/1
  End Time         : 2000/12/31
  Coordinates File : /Users/jfrench/Dropbox/Code/GitHub/smerc/tests/flexscan_ny_coords.txt
  Coordinates      : Cartesian

Analysis
--------
  Type of Analysis    : Purely Spatial
  Probability Model   : Discrete Poisson
  Scan for Areas with : High Rates

Output
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  Main Results File : /Users/jfrench/Dropbox/Code/GitHub/smerc/tests/scan_test_ny_poisson_elliptical_ubpop_10percent_penalty_strong.txt

Data Checking
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  Temporal Data Check     : Check to ensure that all cases and controls are within the specified temporal study period.
  Geographical Data Check : Check to ensure that all observations (cases, controls and populations) are within the specified geographical area.

Spatial Neighbors
-----------------
  Use Non-Euclidian Neighbors file : No
  Use Meta Locations File          : No
  Multiple Coordinates Type        : Allow only one set of coordinates per location ID.

Spatial Window
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  Maximum Spatial Cluster Size : 10 percent of population at risk
  Window Shape                 : Elliptic
  Non-Compactness Penalty      : Strong
  Isotonic Scan                : No

Cluster Restrictions
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  Minimum Cases in Cluster for High Rates : 2
  Restrict High Rate Clusters             : No

Space And Time Adjustments
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  Adjust for known relative risks : No

Inference
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  P-Value Reporting                  : Default Combination
  Number of Replications             : 999
  Adjusting for More Likely Clusters : No

Border Analysis
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  Report Oliveira's F : No

Spatial Output
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  Report Hierarchical Clusters              : Yes
  Criteria for Reporting Secondary Clusters : No Geographical Overlap
  Report Gini Optimized Cluster Collection  : No
  Restrict Reporting to Smaller Clusters    : No

Other Output
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  Report Critical Values  : No
  Report Monte Carlo Rank : No

Elliptic Scan
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  Ellipse Shapes                          : 1.5, 2, 3, 4, 5
  Number of Angles for Each Ellipse Shape : 4, 6, 9, 12, 15

Run Options
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  Processor Usage   : All Available Processors
  Suppress Warnings : No
  Logging Analysis  : No
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Program completed  : Sat Mar  9 08:03:44 2019
Total Running Time : 1 second
Processor Usage    : 8 processors