ed3d6b4a7fc51c91d1bd86f24c42c0da *DESCRIPTION
059f73ca31492933cf2e4f2e9b15b6dd *NAMESPACE
144822dd4b604dbc0afd156e35e6f477 *R/1000G-package.r
73291800602e5b24ef50448d53db2660 *R/hapsim2-functions.R
eb1e0f391013927e94f2f9f9c220079e *R/readvcf.R
609ebd2fce0dcc0cafacba7329c66a55 *R/recombination.R
7d3d14d0a852417645740849ec9082fa *R/simulation.R
ac34871e33529a3abdcf12e30dde0a5e *R/writeped.R
42f4dd880e06571ce654a6723e9ee3fd *README.md
31bdfd7e490087a219b0ec9676a29e05 *build/vignette.rds
c338b17c1db72a161b3eb955a95c3350 *inst/CITATION
78dfc6e21cd46ebf225d35b4b4650307 *inst/doc/SimulatingFamilyData.R
7aa90b03733b2ca7310c8e65d94b31de *inst/doc/SimulatingFamilyData.Rmd
c1a581bd99094eb53ec28c0664065c5b *inst/doc/SimulatingFamilyData.html
5dd9b251e2bcabb6f0a22ee0c342c959 *inst/doc/getting-started.html
5763e0e3e9627cf6cb21781c8cb04090 *inst/examples/chr4-geneticmap.txt
c4c8b3f7eadb70fb5e2624b57ba8ea73 *inst/examples/region.vcf.gz
59f2af9dd340fe43a507f37affb95807 *inst/examples/simple-example.R
123f368855d241eff1a4a82c2af82fc2 *man/SIM.Rd
2c537432227affb29d976614ac4c4a2b *man/computePairIBD1.Rd
bd88cbc4dd7d9d7e8689cdb6198cbb93 *man/computePairIBD12.Rd
73cca34b2088bb8b643a8c66e227c83c *man/computePairIBD2.Rd
b07df16570dd893228e5fe7ef2a4f154 *man/createVCF.Rd
be44701a1dfca98cf351cecdb7cc4370 *man/crossoverCDFvector.Rd
ec190926a4f563116d3d755318df8708 *man/downloadGeneticMap.Rd
681a6e2a6e412b7779de7636481373e0 *man/generateRecombinationDistances.Rd
5fbafbe72fc3db94c389a2af0b60218e *man/generateRecombinationDistances_noInterference.Rd
d7912018fdc089db87807ba32d37b1e3 *man/generateSingleRecombinationVector.Rd
3f78114269a850731bf0b9b358948b44 *man/generateUniformGeneticMap.Rd
415c9d01be3c68075885b9aaf5de5066 *man/geneticMap.Rd
e62d009922a660f6db1612361673f13a *man/getCMfromBP.Rd
53fb904c7045b181e2571fce3c00b905 *man/newFamily3generations.Rd
4cb840c455a4afb895f84d50ae686206 *man/newFamilyWithOffspring.Rd
d224dbb31fab1fffcf724c7ae591736c *man/newNuclearFamily.Rd
d12e0b95a70842fd6e42af9952a1c952 *man/plotRegionalGeneticMap.Rd
8262d15694c5d809b60dd96d9bf20287 *man/printMatrix.Rd
e0ac0b4cfa1c426c85f0ee9a859cf977 *man/readGeneticMap.Rd
2eae9be21959923d4f3f49a067a02aad *man/readGeneticMapFromFile.Rd
caacef67e148175587e49193b4db993c *man/readVCF.Rd
dbe44178b91061a5fe5c2ef391a8d521 *man/sim1000G-package.Rd
8d1208bcbceae48c015916fe537c1084 *man/startSimulation.Rd
5025c12a58fb54e54bb3caef32d7375f *man/writePED.Rd
845973a039dd8dd70a79d3e8e4d27361 *tests/tests.R
12c2fbd81e99c220403c58c389c938a1 *tests/testthat.R
7fdd0247c3024f261f61372fc6f91268 *tests/testthat/test1.geneticmap.txt
2a482839dcf6c1d3e0e2b930a192c1bf *tests/testthat/test1.vcf.rdata
a596fe5d6dcd3938551b701e69d59689 *tests/testthat/test_2.R
7aa90b03733b2ca7310c8e65d94b31de *vignettes/SimulatingFamilyData.Rmd
