e9546306895b3b52e375e744a9e94bc2 *DESCRIPTION
c5d90c3138156e888e7ba7b08432dba6 *LICENSE
595d8e43d6b7294c862026b6898a0e88 *NAMESPACE
c3ed49b90851589f069492081c85edbb *NEWS.md
3cd89bbd25e4bd65565c1978430d6524 *R/add_h_arrow.R
034fa33ab83632cedf569a668bd3f55d *R/add_labels.R
4219a4fd01add3655ba24e2f7c3c76d8 *R/assert.R
65573b1d1bab1c54e3f68acb3706a39c *R/bayesianNMF.R
09224483c46ebb39947dc4b5d0239457 *R/class.R
4134777b16443a48722a6079e22590a2 *R/data.R
e4f194d1ca32426d4a4a9f2288b5abb2 *R/find_enriched_signature.R
f23790531317102d8530d5d4990fec77 *R/get.R
50cabbdbc1e8cefa8956abccb13051bb *R/get_adj_p.R
c4afbad60101203fe210d52055909e94 *R/get_bayesian_result.R
09a133590a402ffa86eb1cc9b0401ee7 *R/get_cn_ploidy.R
fa75ee773fe9037e8bf0e0034f250e3b *R/get_genome_annotation.R
7d88ff6c560f59dcf7d59fdb10d7e299 *R/get_group_comparison.R
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8e6846db29a6911a27788cbc8bfc6c43 *R/get_sig_exposure.R
2cdb8ebf2ba7baca1a9b1d01c3eb3712 *R/get_sig_feature_association.R
0910eacaa068062929089cf3df32183e *R/get_sig_optimal_exposure.R
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71b98874f578e00e08b706c6c69e75a1 *R/get_tidy_parameter.R
9837bda45fc1bbaf48074757a1fdd866 *R/handle_hyper_mutation.R
cd068cc9c2323514bbfd462008c10e80 *R/hello.R
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317e555a72b8026a2954a169a2884a4b *R/helper_derive_cn_features.R
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0f6d6caa7f3116df6cce312ed7171a82 *R/helper_join_segments.R
1e1ea6f06b1c56ef5be0ca72d9db8059 *R/helper_normalize_by_feature.R
c2cc7882739d225878a497eb6e1a167b *R/helper_scale_nmf_matrix.R
5f82b9739c1cf42df6328bb0e68ede61 *R/helper_sort_signature.R
ab928c7acf1402a3eb017c20b9fff767 *R/read_copynumber.R
f1da43598492a3f6af6ec02c576b7ee5 *R/read_maf.R
23b3bfb8c5aba2b09fff5acc3b356b24 *R/scoring.R
98a971dafdaace185f8fc5b76e350263 *R/show_catalogue.R
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a20d58fee16e7ea8bd6be0c5f85fea97 *R/show_cn_components.R
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9b5abd80a5216c343d7e5691cf91977d *R/show_cn_features.R
6645715a8261235c42c26432f7ffe6f5 *R/show_cn_group_profile.R
70099fe263f6146753d73328159c8b05 *R/show_cn_profile.R
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d5e275b2be6b33eae887e7ffb978cf53 *R/show_group_comparison.R
cd90819f39ae508a8216446f1528492b *R/show_group_mapping.R
bca9dff3ba3e1aee778ed2340025c0dc *R/show_sig_consensusmap.R
3d61885b33d321ce4d4f9d863d048c4a *R/show_sig_exposure.R
40aedf780f8543e078d0f5ebc3dbd803 *R/show_sig_feature_corrplot.R
28979fa7440db16becf3e0d5b1883d2f *R/show_sig_number_survey.R
5c2cc8473e0b0eb1c6c0889e4f6aece8 *R/show_sig_number_survey2.R
7f5db203f69110a8b7a2f1b4a629e7a0 *R/show_sig_profile.R
bdc2d4db08aba32adac2cac9338e8892 *R/sig_auto_extract.R
161ae672844b3e1d86cf5fc13a79ea81 *R/sig_convert.R
53711596dfbd29f0de9911d5f7c4c34f *R/sig_estimate.R
d9c48c29d723f48c2ff3578455798b82 *R/sig_extract.R
c344a7a82681cf5d9b150b4b44c11cdc *R/sig_fit.R
e09d0096181d6167bbf4d9e82b96a657 *R/sig_tally.R
bb2131be329afd723b6688d4094f0777 *R/sigminer.R
3dc1db4af54748d895b4741cde2464ca *R/signature_obj_operation.R
ad3f3c64fcdb96e66b1859bd35c48478 *R/utils-pipe.R
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c9c92fe4b3f3aabab6119a4d2d7c8f01 *R/utils.R
a6f34244a53ce8cc75e743f5c46b5403 *R/zzz.R
cf035e0c4773397eced5a630424c0f7f *README.md
461fd918e4f1d9621fd22c711c46fd4e *build/vignette.rds
5ba403d476bdc5dbe1706dfef410219f *data/CN.features.rda
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9d8ddd5873716799e68468f98464e20c *man/use_color_style.Rd
1057d9ff43a6cc58aa33a694e28907f4 *vignettes/sigminer.Rmd
