548c17a6817a469ad1e92c6ce21ff4e7 *DESCRIPTION
ce7391287880fe2b350b33c19f6fafe9 *NAMESPACE
3119ff2890f296a12d3dd780c6e2f379 *NEWS
89a1c2a3c6d6ba6742151179b7b7103b *R/RcppExports.R
2f812dd9722b89a9b6b1315ed50b385a *build/vignette.rds
7fc1471a2d4e9c617dcc595a9157a7c0 *inst/CITATION
f7c89b175969f4991e5a9d981f8f5320 *inst/doc/jmatrixsc.R
7ccc966b620150c03a10dd0ad0a6d4cd *inst/doc/jmatrixsc.Rmd
e286b3f97c0f0fe27c18c245fd506b17 *inst/doc/jmatrixsc.html
a969651b104e829555c2bb28924c0a4f *inst/doc/parallelpamsc.R
0616d7d69f98c4a85adb8285b6cf6600 *inst/doc/parallelpamsc.Rmd
49b02ef5ac10b3f8d3e3d4dca2933963 *inst/doc/parallelpamsc.html
b1e3f9d20366d4d5ace915beadc6b878 *inst/doc/scellpam.R
a6a6eaaa884bc915f5d5f5304e98f0ec *inst/doc/scellpam.Rmd
c73dccdaf02a648017e6162a47a44bdd *inst/doc/scellpam.html
3ac15e1a60a0f6cabac5f8c73aa9bccd *inst/include/debugpar.h
b7d4e487db41a240fb821aff1681524c *inst/include/diftimehelper.h
ffab003a6e32a19eec4971bb1a79050d *inst/include/dissimmat.h
32df6f28ec0288f4d3548d9604eec9d5 *inst/include/fastpam.h
75c7542799151eec4c8a5bb4e8855e45 *inst/include/fullmatrix.h
7e42b7d9d29502d1b0ff991a38c151c9 *inst/include/jmatrix.h
9e3ae907bd1b596e82e73b854a06ddd4 *inst/include/matmetadata.h
88b4a2bd69bd4a7590c5e65061f20850 *inst/include/memhelper.h
c77cbe89d1474ab5a16a747a0c069c1a *inst/include/silhouette.h
26a21b4b82d56089cb9916b992123644 *inst/include/sparsematrix.h
64ecaeaf01db6edb9e41e195b66e1f39 *inst/include/symmetricmatrix.h
af8af0d4d5d52892def11b0194b98853 *inst/include/templatemacros.h
e453255e14e21f7626a98e94d01fcf27 *inst/include/threadhelper.h
7cd36d780474250ee959040cb95c60d8 *man/ApplyPAM.Rd
1302b44ef1d1207371069f3e7fce9507 *man/BuildAbundanceMatrix.Rd
6a758680742ae135fbd76a9d598e453a *man/CalcAndWriteDissimilarityMatrix.Rd
85b2122ccb3eb30afd3f0e409c94deed *man/CalculateSilhouette.Rd
35991fe6d8ad9ead5ef3b0655c5a2889 *man/ClassifAsDataFrame.Rd
845bd0fab099209d7ad653ae4bbd9bba *man/CsvToJMat.Rd
3edcc06c83e4afd5271e2f51fbe075e3 *man/FilterBySilhouetteQuantile.Rd
0c26089b6fa1cf453e1331cbb0b5c42d *man/FilterBySilhouetteThreshold.Rd
4ed6ebfe464c19b095406576b9975446 *man/FilterJMatByName.Rd
08d218f1d393f3a143a01684ab18cda3 *man/GetJCol.Rd
d464a3939561659e626f13f8e0e7ae14 *man/GetJColByName.Rd
6199d02d2d44ec453346eac6b9a5e2c8 *man/GetJColNames.Rd
850a9d56fc3836588238eef03f9d6b6e *man/GetJManyCols.Rd
620b8a55e158d3eb3273ac713d65252b *man/GetJManyColsByNames.Rd
c39de862e884cc59f3809f3ce349c0bd *man/GetJManyRows.Rd
991f8ff115a2b8c662521f0e586f033a *man/GetJManyRowsByNames.Rd
852af628d0b271d04aaf99db78b5efde *man/GetJNames.Rd
b93b75cf0f3d0e2d99778635ef551921 *man/GetJRow.Rd
342074145dbc130a6baece3523593302 *man/GetJRowByName.Rd
37d880ca345da2097cc7288a1338ec2e *man/GetJRowNames.Rd
e877b9bd64d95a5f3590f065a6de79b9 *man/GetSeuratGroups.Rd
6b1d6eb3d3f2fe76f4b600edc1378a0b *man/GetSubdiag.Rd
0d9ebfd49b87319199d925ba045b7272 *man/GetTD.Rd
5d4ee21256183eaf61dacf1ad5dd4697 *man/JMatInfo.Rd
3c7e59b1a894563f7c0140ef20142ee1 *man/JMatToCsv.Rd
033b4915dee9ac5d560f46c1df9523b3 *man/JWriteBin.Rd
d1bf6d8d67d5fd5a61e5ac60b84e625b *man/NumSilToClusterSil.Rd
9312e3cfc349118d495fab8d15e9e5fd *man/SceToJMat.Rd
3183361d938aa858c5524cc46026ee9c *man/ScellpamSetDebug.Rd
d823757326707a5335d10ab66d9c52d6 *man/dgCMatToJMat.Rd
7b93da85af7f02f533a8ac768833ded5 *src/Makevars
5c3b5831c8ae97bf8de41bd42e242184 *src/RcppExports.cpp
dbd7e8a44f32032fb646160b9536cce2 *src/biodatatojmat.cpp
0c79b1c4cacb141747699af7e69b249b *src/buildresults.cpp
d573ebf14a696ae7c5fa681bfcf40b87 *src/csvtojmat.cpp
033ec5ceedbdb499cfc5b203831c713f *src/debugpar.cpp
4d1e965f323b36898d67ad3c7c061196 *src/diftimehelper.cpp
405b2313c366fa2f601788f5c5f088a8 *src/dissimmat.cpp
5866f4fae06800277ac5a01183e8507b *src/dissimmat_full.cpp
6acebb8a558bcb1a5d896b9deedddad8 *src/dissimmat_sparse.cpp
cff4132a7026ac6909f9effbf98c1c92 *src/fastpam.cpp
5285a0b6a95cd793ab57491afbdab7af *src/filternames.cpp
480e503f35dbeff5a955d744d97049ea *src/filtersil.cpp
4b8d384a1a1fcd3d34c3f1453b2bf28d *src/fullmatrix.cpp
3792119b59afe55978a5792e7ef4396f *src/jmatrix.cpp
c6f4cc901ac914e095e8966a7001b30a *src/jmatrixaux.cpp
5d00ea40dc10392bff3b8176afa920a4 *src/mainfastpam.cpp
f4d56bb455fe2606a4b7b2608ecbec03 *src/matgetcols.cpp
8bc37a8b64b1b1de09c201be16ba9964 *src/matgetdiag.cpp
d86aba5d7e86df1012f745cb195e40d8 *src/matgetrows.cpp
92c003748393d54f6900ef3a0679014a *src/matinfo.cpp
204d55aa6cd2e3256ce1cc78f1b841ce *src/matmetadata.cpp
7c3859f609734aba009aa60af45fbeb0 *src/matwrite.cpp
ed0d29c45ee0f9a2e1251b68be60e1a5 *src/memhelper.cpp
dd0d24c09552f010c6880996039afeeb *src/silhouette.cpp
c6835d172e278d7612afa75749d4ad8c *src/sparsematrix.cpp
d3951275500315e1c12363e9a70b0081 *src/symmetricmatrix.cpp
c65fb001ca293a7b3f05c40496681ff0 *src/threadhelper.cpp
e273aaff15de6c63e649a5ffc20bc442 *vignettes/extdata/Trapnell_remain_genes.csv
f93611dd960ef5b1e6eeeaaee2e8df5b *vignettes/extdata/conquer_GSE52529_Trapnell_sample.csv
7ccc966b620150c03a10dd0ad0a6d4cd *vignettes/jmatrixsc.Rmd
0616d7d69f98c4a85adb8285b6cf6600 *vignettes/parallelpamsc.Rmd
a6a6eaaa884bc915f5d5f5304e98f0ec *vignettes/scellpam.Rmd
63f990bced65cecac6afea0b94eb74ac *vignettes/scellpam.bib
