d919a9d00eef3ceacfe5f721796d6e31 *DESCRIPTION
5e542d83b26a542c9317743bdf5d3023 *NAMESPACE
c7c18ac1897f2facdb4dd6b97d6ab1ff *R/RcppExports.R
9d9373e857c8baeff216719163f4759d *R/data.R
ae1184c1cd475577833bf6ad39a3a81f *R/diff_expression.R
6f74d08d45d5a3af1bf00f9b272f046c *R/graph_embedding.R
81ad174626bf9648096d98586dfe40c0 *R/graphs.R
c67228fa93c1bae1ba7c0664ce1623c9 *R/helpers.R
651fb1f8cab2c200759994d176f7c2d4 *R/plots.R
2ddedbcb13ee8bf9817e4a6d0d0cf587 *R/saveDeAsJson.R
5b09d836cc9c972c5c9d99962294ede6 *README.md
f6aa978ef4dec5790522e8f0e392a6d8 *data/cellAnnotations.rda
f918f04988c206b7d9dd45f169c8f4d0 *data/conosClusterList.rda
6c4eab57f1f85c926ded7877edeedb84 *data/conosGraph.rda
faafdc0878fdac28232d5a5bb474f45f *data/umapEmbedding.rda
02ac2def69849d7d44e904d17ebc5bc4 *inst/extdata/deview.2.html
9ef352c22eded90a9acd5c5166eb996f *inst/extdata/deview.2.js
591bb2729d896468006d99c5af973976 *inst/include/sccore_par.hpp
95bd03b3cc3b27f11bbee588fe260553 *man/adjacentVertices.Rd
9a1c25ee1440fcec4a98d4c4bfe9dac8 *man/adjacent_vertex_weights.Rd
0fea5cec019c3a45b178199cbe05cf80 *man/appendSpecificityMetricsToDE.Rd
817f5112c5a0e3c4ba2b821fffb13f46 *man/as_factor.Rd
774e3faf9a0db9a9ccb26d20b069ace6 *man/cellAnnotations.Rd
450baf9bbd034f8e2857f5ebac7a0ec4 *man/checkPackageInstalled.Rd
e85c06372ab928e84ebfd58c821476fc *man/colSumByFactor.Rd
ddb280540701d223dc197a701bc5e8ef *man/collapseCellsByType.Rd
ab91c82765238c84f8f6a0bd6abf3fef *man/collapseGraphPaga.Rd
d08081f075f4663975b4f6da422274f3 *man/collapseGraphSum.Rd
71b278e006c6bbe8ecd57570c7e6e87c *man/computeChebyshevCoeffs.Rd
e145aff9cddd7e36fadac8d57590ed45 *man/conosClusterList.Rd
756afd060f5bc1463f0239f7298b1da5 *man/conosGraph.Rd
bd05c98218da6e6a7f4176c99ff6f3ca *man/dotPlot.Rd
79ebe62386b63bbae1985d0648beeba1 *man/embedGraphUmap.Rd
0c7526d37f7adb2aff381372c645ff39 *man/embedKnnGraph.Rd
4b215b4f44556126fd87cfebde3ba9c4 *man/embeddingColorsPlot.Rd
a23929ec8e371ce8c8832fee85a936a7 *man/embeddingGroupPlot.Rd
cf318816613082943f09ed7ccd6f6bc3 *man/embeddingPlot.Rd
9bc575962f244c43d267cc633bcd7e54 *man/extendMatrix.Rd
2a91b56ddf22face306acc4efdf14ea0 *man/fac2col.Rd
ec68c21a3668a19329ecf0445ed76336 *man/fac2palette.Rd
a0eead6bd78fe78531d19d1cdd3282f5 *man/getClusterGraph.Rd
30ae1f3399b970f68398977070094eec *man/get_nearest_neighbors.Rd
d4595cda969c3cb5eb5bf7b4a01abf56 *man/graphToAdjList.Rd
bb3d3d64955c78b20d8afc0faa6099e4 *man/heatFilter.Rd
59a71aad46e11c32c985e3873edaae38 *man/jsDist.Rd
59cf431a84794276fb9be12ea4703037 *man/mergeCountMatrices.Rd
30394c824230528a69a36d50a9be3793 *man/multi2dend.Rd
a28b1c90d5f5d14e158f3a01be175cad *man/plapply.Rd
3a165e3d7136f46a51bba8906bc413b9 *man/propagateLabels.Rd
03ae5cd769b6edc2e3aadfc6626e5d99 *man/propagateLabelsDiffusion.Rd
7dbc6cf1ddb9365076b1576cdbbeedd1 *man/propagateLabelsSolver.Rd
fe208785aec979794ec4595ac5336781 *man/propagate_labels.Rd
92f4f8f59bca7d2b1dcfd7249e4b030e *man/saveDeAsJson.Rd
e81ffee014d329d4b852ecb1a4286805 *man/setMinMax.Rd
a8d33c2a1513d3055a1c5fd82d6e2f19 *man/smoothChebyshev.Rd
180060cc1d8ca8fc596a1c20f7421dfe *man/smoothSignalOnGraph.Rd
b20b690b031bab9baa165664cbb5e3fa *man/smooth_count_matrix.Rd
b84c227588af7282a2099935fd524a82 *man/sn.Rd
8d2d4df31f70678c8bdaef33dd234151 *man/splitVectorByNodes.Rd
1c1097ed054891c0d9a9c136a5906aa2 *man/styleEmbeddingPlot.Rd
c78f4edb190fb2504d46330f1130c68e *man/umapEmbedding.Rd
53219e051f452e49a9d23013c716da92 *man/val2col.Rd
9e64bdf7536b993f83dcd0d1c5e1d8c7 *man/val2ggcol.Rd
a97fe518b961b91710719d8d85dd2c66 *src/Makevars
5f6ed9df175e72df66274afd3c8b34b6 *src/Makevars.win
1563bcd278e155f051698e5434c91c01 *src/RcppExports.cpp
adac633b9e8329907103dfb6506a2054 *src/graph_embedding.cpp
2fec0e79823f3268f8adc4b0268bd2c3 *src/matrix_utils.cpp
0a3cf31d40976d14f9872218166e178f *src/propagate_labels.cpp
3a86887bd45dd486c45718b56f22fe69 *tests/testthat.R
d7e777494105d82730d0ecbc86f329b3 *tests/testthat/test_helpers.R
