c98988ed8d30147fd38c05d103e68efa *DESCRIPTION
812ed604c58795ede2862ce6a4e54dba *NAMESPACE
b933207ad0c19257762b995ec2ac4730 *R/add.phenos.R
40ac041662562e3657d6bb4629863b9d *R/big.R
f54f9f8469db96ab8b56d680fb53edf9 *R/cmst.R
4567f009deb4a84bf82bf170536e2b30 *R/highlod.R
c4ed18357856af32b838175ebe5a8a4b *R/hotperm.R
73b943edab9b9185223ede00f7dfd087 *R/hotsize.R
6729dcaeace449eefc9840f1211c393b *R/max.R
8afdc7d138adfa1284bd90cf63b8e605 *R/multiple_testing_sim_functions.R
2691e0df2e1c4ad991982cee548e06db *R/neqtl.R
74cac815c73b19d03e60ed089bf6a141 *R/parallel.R
5973406c7885b09e6c49f3df11081bdf *R/plotcmst.R
43e15b98d5a239a39ff51bad8eeea7b3 *R/ravel.R
caa27fc5b3a369254761fa583adb8588 *R/roc.R
132a9f8ab6bb2cf4e7c569ebff41508b *R/rug.R
697902bf598d08d4cdaea474ca5d0d20 *R/runningmean.R
0f64e9122ec2af5bd8d4dfa17ff65802 *R/simcmst.R
a8c86e0b6e6fdc43b4a3348ec038cf7f *R/simhot.R
c257d055fa368c3a8bd05cff67791451 *R/sliding.R
cccf72ca3119c46a7d194dce3447b210 *R/study.R
dc2f482c9166cfc488dd0c0de6ee1642 *R/utilcmst.R
39bf135b5eb185681d74d06c18549a1c *R/utilhot.R
d41c35875c29eff957f88d263399c6ad *R/westwu.R
d41d8cd98f00b204e9800998ecf8427e *README
d9012f4bb4cc97d0cd07cf3bea96ca85 *data/CMSTCross.RData
23f0def7ffc42f2388ec6a0f8fa72527 *data/hotperm1.RData
89bff8163dbfdb0b2e5fe28276ecd4fa *inst/deprecated.R
24564426040a80f5998c28e64b7ee028 *inst/doc/cmst.Rnw
519cd9d96ca7356d29ad6d33701bb80d *inst/doc/cmst.pdf
b370ae49363d35ff42cacf234c02595c *inst/doc/qtlhot.Rnw
1aed798efaee5b528b221c7d090d3846 *inst/doc/qtlhot.pdf
11704113157929b53b0e2c5ba015ad3e *inst/notes/cmst.txt
52d8cbf0da7b5bdc67b82665b7e8c4c1 *inst/notes/code.txt
c15b74d7121a2ddbe21306b65ccd3b64 *inst/notes/perm.txt
6d4c95af46a1a4bcc321d888beccd874 *inst/notes/plot.R
1f353aa7e5840f8c82884698969b6b28 *inst/notes/vignette.txt
4f5aed9c48c35420d2fcf792196707d4 *inst/parallel/Phase0.R
8178038dca48891725c7d1386beb4b11 *inst/parallel/Phase1.R
5b4f049ad59aae7ee7efd58ae028a269 *inst/parallel/Phase2.R
817f9a45083324b22e3ca1fc93eba97e *inst/parallel/Phase3.R
2558f59c4c19ef51de1b21a4cf6f8d51 *inst/parallel/ReadMe
c031e3c89986ff8dbe7ac049bb582c90 *inst/parallel/SOAR.phase0.R
a5c3774fa0c5b298161fd419ec5bcb50 *inst/parallel/SOAR.post.R
0eac83f946b60f56fe187ddcd4a7760f *inst/parallel/cross.RData
8b9712f8ce05f9005356e0b06798357c *inst/parallel/params.txt
be0c94b6582c2f5f503730bb94833b21 *inst/parallel/runparallel.sh
684702e9836a1db10b930c62d5f3d36e *man/CMSTtests.Rd
f589a8745f5a6ad96d2a6a5b680fccd4 *man/GetCandReg.Rd
a0d9688690f56d672a90cec7117b0a65 *man/GetCommonQtls.Rd
aafb4a629861f7a577b99518b7d4be12 *man/PrecTpFpMatrix.Rd
efb799895e471cdd70bc2d2f30545c7a *man/SimCrossCausal.Rd
692111bb7328f17b403106ab8dde4907 *man/add.phenos.Rd
f65e117bea18f3231f310f4e0fc07841 *man/filter.threshold.Rd
04da9aa72c61c2dfe1efe5bac7ced679 *man/highlod.Rd
9e9cc535d12500f25c28790b3f730967 *man/hotperm.Rd
7780b3bf6da7bac3831b7dbdb600f72b *man/hotsize.Rd
c7ca914d7fc9cf321a7e07750fcf1f32 *man/parallel.qtlhot.Rd
3da742be31fe06f70772508c1a51a2d6 *man/sim.hotspot.Rd
42d951c0229a8e83cc216a2e834e204f *man/westwu.Rd
7ab4aae0ebff42ce151372d97076416b *src/Makevars
038436d92771c38855a79685ab12df23 *src/runningmean.c
22acf45d7a3bbdf3f9a177f9987bd1a6 *src/runningmean.h
de1aeda81e8c8ab6ded25df5ae2dbfab *vignettes/Sweave.sty
24564426040a80f5998c28e64b7ee028 *vignettes/cmst.Rnw
b370ae49363d35ff42cacf234c02595c *vignettes/qtlhot.Rnw
eb8b95adf890e0b10c31054ee13a2467 *vignettes/savedperms.RData
