bba9ee52ad92ca170f897a4dcebd71a5 *DESCRIPTION
f94c97c7c0bb14e0af55e2aabcce0040 *LICENSE
bc26899837bab02c43d5cb787669189f *NAMESPACE
73f0fe468b88dc51bc7d7ab3af877b04 *NEWS.md
9a1d553ed136d39a6d8d4ddc309e9ef4 *R/desc01AAC.R
522bb281eb8cbd2d4228ff738daa3601 *R/desc02DC.R
e8c1a58ee55936d7b971af7c9331fda9 *R/desc03TC.R
12b20bc9b8cb74c1c12401b8e2093801 *R/desc04MoreauBroto.R
c228157a68af9aa91d283684128c002a *R/desc05Moran.R
2e0c9498b949b986526c3f551613b6da *R/desc06Geary.R
b0e91cc2eabefe71dcf42fd720fe2e1c *R/desc07CTDC.R
144a9bace6cdb6497fd77fb51d06bd66 *R/desc07CTDCClass.R
bfad6f9d2dc6c95f813d98ee0705e4d8 *R/desc08CTDT.R
60d513c6a3a66269e467b3469d6a7d18 *R/desc08CTDTClass.R
601dc1971ec82294ec53fb07fe436434 *R/desc09CTDD.R
a49af2dcd13b478dfb396f8341e7a5a7 *R/desc09CTDDClass.R
ecfb5d7446a8b7474a7e350dcfa28c8c *R/desc10CTriad.R
2bd904bc56be22ea44141fb1934b9695 *R/desc10CTriadClass.R
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6e828ad4d3c55d8cfdf22a40aa02eff1 *R/desc13PAAC.R
427d524bcd3729a1c9eaf5867bcf0d9c *R/desc14APAAC.R
fc7c052fc191d192539dbcd64f8e7e26 *R/desc15PSSM.R
6ed78ab4763244ca482cb0587fddf35b *R/desc15PSSMAcc.R
5b937cce3e065c10ddd90c9599acc15b *R/desc15PSSMFeature.R
9d1a7abfbd45d441c2bd91ae172de136 *R/misc01readFASTA.R
5d1f327765ed49f32f6156a1d0061306 *R/misc02readPDB.R
8bbfc9cbc56f8aa91738973088e8bf83 *R/misc03protcheck.R
f19753a2d7162c35318a33505d67c54b *R/misc04protseg.R
33066bd184e0d49d59deae31ac1e3384 *R/misc05getUniProt.R
6deb3bfb2ff482cd838058b5f4aed6cd *R/misc06acc.R
9a075412c57a95e0866f5e84a1bbf72a *R/par01parSeqSim.R
cc6bd120561003d8f212dbf38d50b572 *R/par02parGOSim.R
49d9685f1ad27b49fcdf34943346cd62 *R/pcm01extractScales.R
701853b6712c16f0108aa546aad4f773 *R/pcm01extractScalesGap.R
2b034b50539f6ff89674684f98850520 *R/pcm02extractDescScales.R
6d28dc02572418efdf10f996f6804ab7 *R/pcm03extractProtFP.R
a9caead858eb7ecd1ec97cceac4629e0 *R/pcm03extractProtFPGap.R
8b001f3c7a9cd8839201f67541af4160 *R/pcm04extractFAScales.R
40c2fda24878b9e5743d1650133ca5cb *R/pcm05extractMDSScales.R
9b6d4817aa30e3331c38afc8b63aef83 *R/pcm06extractBLOSUM.R
832ed074c3739ae877433c39ab247488 *R/protr-datalist.R
07da2ed8c0cdc90e2b1c51f1f7bf54b5 *R/protr-package.R
709d2aacea13d01d9252607237e25a1f *README.md
e49d783121fc6e454a75924f9715f5c7 *build/vignette.rds
74fd2419e84eb552d3d7bf73b5f12180 *data/AA2DACOR.rda
5b7c6f94b51a6cc85f679be46f8ca65a *data/AA3DMoRSE.rda
950a7207428adbf07025b3ea572ca17e *data/AAACF.rda
4203a744b06cc6d4d092fd44978fb1e2 *data/AABLOSUM100.rda
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81ef809ecf130e9ad4a781b4db1cd0ca *data/AAEigIdx.rda
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5206e73c17abdf7ca505c5ef044a9804 *data/AATopo.rda
629742679f494f564d681b3bd25b4f7a *data/AATopoChg.rda
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e4dc18863083c330da419217c919c2e7 *data/AAWalk.rda
fe761e0c115a58ab00a61ad6c4f8801e *data/AAindex.rda
67b96d316eb08862dc197d055148cad7 *inst/CITATION
285949211a0cfb4dc0be0b4761d07c88 *inst/doc/protr.R
6984ac1b5aad4bcb1ba05b87250f897d *inst/doc/protr.Rnw
4faa531c048f84eefe5ecd06aebf418f *inst/doc/protr.pdf
ca35c56c0c379f292f8fab68b3a19f61 *inst/examples/protr-package-ex.R
e9a8c531da4011cd6c79e837c7ca9775 *inst/protseq/4HHB.pdb
4a16b7ca86e201cec2c42382c4445180 *inst/protseq/P00750.fasta
dc85c304db0d96038b7cdab71913b2dc *inst/protseq/P08218.fasta
3bacfe7684c62676c828bb7d22c25ef0 *inst/protseq/P10323.fasta
4e16519c3091af55bba78c73ccb5ada4 *inst/protseq/P20160.fasta
12d1df65f398dedba3390ad8c4d546f0 *inst/protseq/Plasminogen.fasta
4fc1d897c523a5634e1b0a166d9b21ec *inst/protseq/Q9NZP8.fasta
5c90cd7a3f12abadb17c27732273d064 *inst/protseq/align.fasta
f4cc22e4b007a23c12d0be0d77cc99dd *inst/protseq/extracell.fasta
8ee3aee7929db8ea3941fc4e7dc54d06 *inst/protseq/mitochondrion.fasta
0c58ef02dc11e90eab4d304185ef7df3 *inst/sysdata/AAidx.csv
4b58694e15ff7e2952b9884c34fd4c57 *inst/sysdata/Grantham.csv
b69fe9c3517b1bb04d79fa1833c35363 *inst/sysdata/OptAA3d.sdf
7957cc59a12a8726b53d21149df781f9 *inst/sysdata/Schneider-Wrede.csv
1d037e84a71eb7a450a323bb6cf7db3e *man/AA2DACOR.Rd
6d6aa1186cc25cf5c604f745c95e3538 *man/AA3DMoRSE.Rd
f7d20b730d429ac6cfd81018f5b20b41 *man/AAACF.Rd
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6dec1bd643829d071271b2dd495857a8 *man/AABurden.Rd
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c6fb81895d8e4e1e6ca139e1689be996 *man/AAConn.Rd
0bfe51071ec31f87f75719b80190858f *man/AAConst.Rd
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5ad36ca33c7f0b42954abb57c36d27ad *man/AAGETAWAY.Rd
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294f94b44185507104057e639f40e749 *man/AAInfo.Rd
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de70aa5ab4bb4c7f307e388c565d074c *man/AAMOE3D.Rd
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1d810d365dd4eab66625bdd3aa37d293 *man/AAMolProp.Rd
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9dd74642ddfb7c24ddf5237a5713d82f *man/AAPAM70.Rd
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5b57987e096a81e405783440d938b61e *man/AATopoChg.Rd
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48440238757d72cc9fca93a6dc91f80f *man/AAWalk.Rd
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f7a30109f99ef559be5247ce03b7b2a3 *man/acc.Rd
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3b6bb963974b207ba2fcdccad5061559 *man/extractAPAAC.Rd
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1fc78c461b982b1428d31720e83e1eeb *man/extractCTDC.Rd
ac9a5a6c030b71998d33f03e71001559 *man/extractCTDCClass.Rd
d8bb8479b3785158ac0ac6030743d7a6 *man/extractCTDD.Rd
da2431eff67b3e82fa627f96f4f4a636 *man/extractCTDDClass.Rd
c6c34ee6eaa49ae52c02f4bf0ce89b6d *man/extractCTDT.Rd
ade03b0ab20479ba31dabc88c4c0d249 *man/extractCTDTClass.Rd
2eaccda9d9ed617904f8da4d35652819 *man/extractCTriad.Rd
7c5dd222fef10d8f9970c2a0c0de018d *man/extractCTriadClass.Rd
a7a1860b4da1b0d62206b355284dccbb *man/extractDC.Rd
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064131d4dab523c86f7a413927d28982 *man/extractFAScales.Rd
34c2f24de8a05adc9ce86c07975cd862 *man/extractGeary.Rd
4aa906b56d650bf800092a1df9740c9b *man/extractMDSScales.Rd
fa3182a1ed1bdf4d27e9614da7875cf5 *man/extractMoran.Rd
4a2d365bf339ece5faa6b8334a040196 *man/extractMoreauBroto.Rd
6ce60513197005d739ee0e101786aa08 *man/extractPAAC.Rd
c4675d75763863e0d954eea97e542890 *man/extractPSSM.Rd
d6578a14c0c6de660364a31ad3b78970 *man/extractPSSMAcc.Rd
165726eb608eee83262dbd8f07bfb029 *man/extractPSSMFeature.Rd
32face085300861a9473f961a75590a0 *man/extractProtFP.Rd
2cbd05542189210f78787d9086a1564f *man/extractProtFPGap.Rd
08b52ff55146bb6d326159d10b96ad9f *man/extractQSO.Rd
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1f2ea150b7f8ba22a5f0d17059066f40 *man/extractScales.Rd
52a520a14cf70a22d6b73d2bfff223e7 *man/extractScalesGap.Rd
51a1680ea033c795e0ba78aaffba82c2 *man/extractTC.Rd
c36eb79c72fbf6030ccba1eaef930363 *man/getUniProt.Rd
b90484d4b8b32fdbde759edcbd146006 *man/parGOSim.Rd
cdf5a839f96d1c97de90bf8eec7e7002 *man/parSeqSim.Rd
754461ed4fc52e73f1bee66f75442080 *man/protcheck.Rd
9335da82d149982b1d063f3498fe739d *man/protr-package.Rd
134af2040662a30c06fa3c4720075d0f *man/protseg.Rd
65293aacab7ea34a51b102d4a4decddb *man/readFASTA.Rd
7cd33f75ec7ac8b95f4393dccd381ae2 *man/readPDB.Rd
0374b7f43cbabb9109fecc8e814c42bf *man/twoGOSim.Rd
51a7073070059b72a30f5c5ef5271d49 *man/twoSeqSim.Rd
a8b92f7ece00a96c4b1c3ed99997a6b7 *vignettes/fig/AAindex.pdf
9cd0f701809c1de6eb369ece652cbb95 *vignettes/fig/APAAC.pdf
24117eed39299675686d5533b15e4cf6 *vignettes/fig/CTD.pdf
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1aa13d2372e2581dbd9164c13e5898f2 *vignettes/fig/QSO.png
87067dceab1764429e1f5ca7f83fb6f2 *vignettes/fig/ctriad.pdf
909d7c3ef95eca552daadc4116caf3de *vignettes/fig/logo-panel-text.pdf
bfefbe1e89dc7e4966676ef0c30f8e1c *vignettes/fig/protrweb.png
2e53c3a9280f6c3fe9db261ffb8ab18c *vignettes/fig/roc.pdf
6984ac1b5aad4bcb1ba05b87250f897d *vignettes/protr.Rnw
a89ca75d7562fbe92503df3ced38690c *vignettes/protr.bib
