6b2970dfd354c7f096a518ad831c1f63 *DESCRIPTION
3a925589a8f6807c545af095ca1a7086 *LICENSE
18499a625551cb4b767cf4cbd5839fdf *NAMESPACE
9d178b4a1f932c6441ae16dcc5a19792 *NEWS
0fd168513e49299ae10881997339f5ad *R/desc01AAC.R
05509721fc3522c0d5ceaf619f7c8768 *R/desc02DC.R
efc3b5f1af0dba09c0763400266bfa09 *R/desc03TC.R
92e97968366f493b3a2d432dbefc88ce *R/desc04MoreauBroto.R
82dfb43292567669d9a4303769ca0d86 *R/desc05Moran.R
f44fcd1cb3d314934edb7e06c86e7695 *R/desc06Geary.R
227a4129fe964e59a86dea8b11c2dcd2 *R/desc07CTDC.R
fa414705962dcde5d8066e4c3e1b4381 *R/desc08CTDT.R
cdf6b3182e6ed7a77c38d8342f915ec0 *R/desc09CTDD.R
6b36163b01f715fcde39b5693b66671a *R/desc10CTriad.R
c5cf43980c7b0c8977c3a74beba5b3e0 *R/desc11SOCN.R
89c38ee0965381295962cd171ec8b920 *R/desc12QSO.R
91535bc1390c85fd2645f6324c7ede1c *R/desc13PAAC.R
46ea0edba29fd753db01cc2e4299e908 *R/desc14APAAC.R
31cdae233f2410cb09bfdb9a0f6c2ce9 *R/misc01readFASTA.R
54c8be41f1c6c4da39a025c42aaf3664 *R/misc02readPDB.R
ece1065c37a528ea91ac2b604fb04ec9 *R/misc03protcheck.R
22962cfc1c523dda9cd03958d3310949 *R/misc04protseg.R
60b9f2363aa76a37bf620083e7d581e8 *R/misc05getUniProt.R
0beae920873201f15b040db1fe438e41 *R/misc06acc.R
29244f5dcd1d9383db5142b69d82e181 *R/par01parSeqSim.R
1e83b8310b81edd2fd787452eee63d34 *R/par02parGOSim.R
7ab7605f3e63f42e55107b936b2abb70 *R/pcm01extractScales.R
560385010be3f452f5e92825a3055909 *R/pcm02extractDescScales.R
1ffa91b521aac33adcc85863687892fb *R/pcm03extractPropScales.R
29a16165118044f633ead86df596a1f3 *R/pcm04extractFAScales.R
da82676a4170d29746e485a63d8456e4 *R/pcm05extractMDSScales.R
66f8ddefbbaf20619ed40eb965edded8 *R/pcm06extractBLOSUM.R
fb3a68e41a0d56a51300ec356ad6aa9c *R/protr-datalist.R
0daf641f0703dff9b95668bf793bf218 *R/protr-package.R
e0b9b80bb5260622eb78ac647ef99ed5 *README
1f43e1e3e64cc50a3359e6521cf7ea19 *build/vignette.rds
74fd2419e84eb552d3d7bf73b5f12180 *data/AA2DACOR.rda
5b7c6f94b51a6cc85f679be46f8ca65a *data/AA3DMoRSE.rda
950a7207428adbf07025b3ea572ca17e *data/AAACF.rda
4203a744b06cc6d4d092fd44978fb1e2 *data/AABLOSUM100.rda
98ef4230c3ede64cc0f553b66b42c477 *data/AABLOSUM45.rda
d5c768c167c8576867c20de62030e3b8 *data/AABLOSUM50.rda
315986a4d4ec8307369d01e87c48a883 *data/AABLOSUM62.rda
e54c9332a0647029d24f60721345031c *data/AABLOSUM80.rda
94fc7c9344f718ce131af54429247390 *data/AABurden.rda
3c5a76840812febe22ec1201f8327fea *data/AACPSA.rda
fd12e4bda6ed3b63b9f7e8b48aeb45ab *data/AAConn.rda
f8a9e8d2156c0594a3627cb3e13687f1 *data/AAConst.rda
6271d5667f368f5e44df2c3dad6cdc61 *data/AADescAll.rda
d4abc40bb18cd6eefa4eea3278d67b72 *data/AAEdgeAdj.rda
81ef809ecf130e9ad4a781b4db1cd0ca *data/AAEigIdx.rda
78aaa7c32d779ae8629c68fb5e00250d *data/AAFGC.rda
b45121a25eb42ecb4f8e5815505dc057 *data/AAGETAWAY.rda
fe1d8b062c9f818b277fe1d42c97dbd5 *data/AAGeom.rda
c13402f9c748afa5eac93b09c1e8b598 *data/AAInfo.rda
31c26f7333f4590a28cd1f2033f8f196 *data/AAMOE2D.rda
7827194dbf08a95ea0e2ac1dad00372b *data/AAMOE3D.rda
74d94a749d98f5b469c42713065db798 *data/AAMetaInfo.rda
a78805067601b819e7da557c20a0b93b *data/AAMolProp.rda
18bc963fda844b819dd26df22154ef26 *data/AAPAM120.rda
f6a62229b8fc278ae2e4372a5a8dcd08 *data/AAPAM250.rda
e9bf133d41e73382cdab31e266a880ab *data/AAPAM30.rda
eee718d631033184beffa3f620b2f3e1 *data/AAPAM40.rda
50221d8d338b3353dec10a6a4c6fd14b *data/AAPAM70.rda
ce7e34c6f0e41061fcbd152d71e4657c *data/AARDF.rda
55a3b6a3bf6921d2aa04f449927e761e *data/AARandic.rda
5206e73c17abdf7ca505c5ef044a9804 *data/AATopo.rda
629742679f494f564d681b3bd25b4f7a *data/AATopoChg.rda
cd06e7f0cd64b800197fb41332eddc95 *data/AAWHIM.rda
e4dc18863083c330da419217c919c2e7 *data/AAWalk.rda
fe761e0c115a58ab00a61ad6c4f8801e *data/AAindex.rda
e4998dccf0d7c7d9cf8c29ef0cc064bc *inst/CITATION
906f315cb62339726ec7f114ac07f72d *inst/doc/protr.R
01ea8261f4c60bdcae46dd38c3cc674f *inst/doc/protr.Rnw
6355e6bdb9817ee4906277e26f9b232e *inst/doc/protr.pdf
ca35c56c0c379f292f8fab68b3a19f61 *inst/examples/protr-package-ex.R
e9a8c531da4011cd6c79e837c7ca9775 *inst/protseq/4HHB.pdb
4a16b7ca86e201cec2c42382c4445180 *inst/protseq/P00750.fasta
dc85c304db0d96038b7cdab71913b2dc *inst/protseq/P08218.fasta
3bacfe7684c62676c828bb7d22c25ef0 *inst/protseq/P10323.fasta
4e16519c3091af55bba78c73ccb5ada4 *inst/protseq/P20160.fasta
4fc1d897c523a5634e1b0a166d9b21ec *inst/protseq/Q9NZP8.fasta
0c58ef02dc11e90eab4d304185ef7df3 *inst/sysdata/AAidx.csv
4b58694e15ff7e2952b9884c34fd4c57 *inst/sysdata/Grantham.csv
b69fe9c3517b1bb04d79fa1833c35363 *inst/sysdata/OptAA3d.sdf
7957cc59a12a8726b53d21149df781f9 *inst/sysdata/Schneider-Wrede.csv
00859af63625494094b2dcaa2779cd44 *man/AA2DACOR.Rd
4a86dfde0b4559868ed9cdcc5ad1cbf6 *man/AA3DMoRSE.Rd
594d7a8bac8ce270d3484c1a6859f8bc *man/AAACF.Rd
5dc121b68b54206f4c12242050ce2dd3 *man/AABLOSUM100.Rd
2e2a8f07ffbbe368e93f01fb328e92f2 *man/AABLOSUM45.Rd
609df8e33e14104bf7be6fdd313d99d2 *man/AABLOSUM50.Rd
b930ef0123e85263846281200bd8db9d *man/AABLOSUM62.Rd
bafca4a5c0b32f5c8c91b99821b4a71d *man/AABLOSUM80.Rd
f98a03d028c5370dd797cb6a751206c9 *man/AABurden.Rd
4d39c5491164266b25aaf3e208b1f950 *man/AACPSA.Rd
dfd6b333f4b464ff0121cfaed3a578dd *man/AAConn.Rd
76a17492a06032e6676df016ffcecd40 *man/AAConst.Rd
a10d23293e4f499513ebf77fd886056a *man/AADescAll.Rd
ee110e5d216ce52548be5ca103cd089b *man/AAEdgeAdj.Rd
fbb5f9aed04193b82660b4df2e6d9298 *man/AAEigIdx.Rd
14ba6cfd88f54ab37b8b41668cdca770 *man/AAFGC.Rd
d6340eab5d1f7f6b396e00b1c36792c6 *man/AAGETAWAY.Rd
dc740d06f8f2677317ca3d4efbdc0550 *man/AAGeom.Rd
42aa505f71c49b07bbac65667d2c692b *man/AAInfo.Rd
bbb75c312285ef61f35d83391a5567f5 *man/AAMOE2D.Rd
61cc088b8ae0aa2c8dd7372ca09eafe4 *man/AAMOE3D.Rd
11fdeefeba2461bce995d80513cd43d3 *man/AAMetaInfo.Rd
2f52f23fd55712107a24e0194d8711d8 *man/AAMolProp.Rd
8c882bad3b81f67a76d6e7cd03cad9fd *man/AAPAM120.Rd
1785f85a7e941644e9274a4d5bf7f4ff *man/AAPAM250.Rd
072be321926a6a123483387725691e44 *man/AAPAM30.Rd
5cc3233199164d2600f0426779ef9df7 *man/AAPAM40.Rd
08cdc9fba8bcb5312183d50d700f5679 *man/AAPAM70.Rd
429cd68e783f7fc6d3d5fe37098d7747 *man/AARDF.Rd
630ae44594d24601d69267670e19912a *man/AARandic.Rd
00d0e04be4b8b5e47bde699278389293 *man/AATopo.Rd
66537da3b77d238f63e2ef7f780a8968 *man/AATopoChg.Rd
68a436ecead7dda15d0951dd82994879 *man/AAWHIM.Rd
71c98a5374ed8f12c0ab2f339a96b8b3 *man/AAWalk.Rd
01e18b6be56a4cd22233ac7f8266f754 *man/AAindex.Rd
bcab6378e4a935a0058c89300d9568c7 *man/OptAA3d.Rd
20d0243446e3ef2a4fb2da4ff7613466 *man/acc.Rd
366c47babfe6fede29b187a4e6781152 *man/extractAAC.Rd
151161486c8141e26e8e0383928795e5 *man/extractAPAAC.Rd
f5fd20dd11ebbcbdf2686e68c67bff35 *man/extractBLOSUM.Rd
ff7a3a7ac83100d184cd245507b9ade1 *man/extractCTDC.Rd
efdaaa032e5e68cc39804913d99a7168 *man/extractCTDD.Rd
16434fa220bc691ffeecd7f1f34e6d25 *man/extractCTDT.Rd
01d93a7ad31d450369ba79c9170d0aef *man/extractCTriad.Rd
4a9700c6345f1a851ddea14ed001c65b *man/extractDC.Rd
0039b4795b9c4d7e6a34a982b6866be0 *man/extractDescScales.Rd
75b218d9e8c48ab3716b5a1816546839 *man/extractFAScales.Rd
e41d954ddec025180451a827ccf156fe *man/extractGeary.Rd
d006e5f945159043d35eccaea288551f *man/extractMDSScales.Rd
7c501d34243b867036ed3685603e2e0a *man/extractMoran.Rd
265bb5769a4199ef5a62f05178b4d969 *man/extractMoreauBroto.Rd
c1d837a78ef421ffe5e1c4147d861d80 *man/extractPAAC.Rd
adcb9da9c765fe48fc5c844b6cd5504d *man/extractPropScales.Rd
398ab8f7ffea5b886ec888dab6aa595b *man/extractQSO.Rd
f641d0bd5439a1296609b27e4db78802 *man/extractSOCN.Rd
2f7c0be9241b1a666a91801f8f7f8043 *man/extractScales.Rd
296ffc543c4e3d0ee21def2439d39481 *man/extractTC.Rd
8c4dc5b0101c5a3dd517a97ec57e3096 *man/getUniProt.Rd
62c6ad5fa8540c11320ef428ec8c4d87 *man/parGOSim.Rd
12c772fbcdcc90dc46ad41c4a72d0133 *man/parSeqSim.Rd
64c1bbcf1b6c33de924a836a03392e60 *man/protcheck.Rd
bbfbcfbe9a380cfdda67e0c08c4ac2f7 *man/protr-package.Rd
637249889dd8220ee25a83ffb5cb2d4f *man/protseg.Rd
5567d5a658eb1cb5fe7d5211b4deae93 *man/readFASTA.Rd
13dfe22093af66590b10421063451771 *man/readPDB.Rd
852746d609d7071df06b36e724bb5cf9 *man/twoGOSim.Rd
8199774f165be70d98f01859ac1fd772 *man/twoSeqSim.Rd
a8b92f7ece00a96c4b1c3ed99997a6b7 *vignettes/fig/AAindex.pdf
9cd0f701809c1de6eb369ece652cbb95 *vignettes/fig/APAAC.pdf
24117eed39299675686d5533b15e4cf6 *vignettes/fig/CTD.pdf
eacbe38823569968d7e4413412fc9cab *vignettes/fig/PAAC.png
1aa13d2372e2581dbd9164c13e5898f2 *vignettes/fig/QSO.png
87067dceab1764429e1f5ca7f83fb6f2 *vignettes/fig/ctriad.pdf
14158a55a4db7fd5b77e51b8b6440bc9 *vignettes/fig/protrweb.png
01ea8261f4c60bdcae46dd38c3cc674f *vignettes/protr.Rnw
bb9257ba800bf39c3c36cb37539b672e *vignettes/protr.bib
