3c499189067afe5f15334f822799b355 *DESCRIPTION
f219658c9ca8a79ef075b0023fc37ca4 *NAMESPACE
ca3bfd990798cf31c270e5354074d8ea *NEWS.md
fce48e8d43c0e8952ad6a2b783d58dd2 *R/ArrayParameter-proto.R
2fb4776c85ed423f88ae06b96355c817 *R/Collection-proto.R
ef5012dcfb2704212ba351d20e17f0d6 *R/ConservationModifier-proto.R
e21259d1f02c36aef1e0ccd4b46c5da6 *R/ConservationProblem-proto.R
ad263b77d731f8af4d828e44b8fc670b *R/Constraint-proto.R
f824219eaa63472c2e40d61d788908ef *R/Decision-proto.R
ee3c997ba5d83304d8c3164975dcbf2e *R/Id.R
d8409fdd68e1dd6205b568a008b7ab09 *R/MiscParameter-proto.R
774745969ceac26c56d82cc52158909d *R/Objective-proto.R
d7c5ae00ad38aa6c67bd84d47ddd4374 *R/OptimizationProblem-methods.R
d37bf2e360b8f19d4f56b1f3c9eaa9b6 *R/OptimizationProblem-proto.R
c1616feffd38993b4d1593ef7e5a7704 *R/Parameter-proto.R
b68db804ef5db8cdc4edd8641b39436d *R/Parameters-proto.R
49b9294493a903f774f03db279fb259e *R/Penalty-proto.R
0a896b895a301211a2125ee6a6e8a8db *R/Portfolio-proto.R
c796d01adccf71f397336c25aa2d3a5c *R/RcppExports.R
da03fa44fd7098bbc4b9ff7e4b388bc2 *R/ScalarParameter-proto.R
75eae396174277b7a19f58fdbc805483 *R/Solver-proto.R
f8f083d34d8b843d7100346d9d581456 *R/Target-proto.R
7f90bf646fc90f1dade1169dbb1269a6 *R/add_absolute_targets.R
fab55ca20c1d84ac92e57675f0183b5a *R/add_binary_decisions.R
df04859b8687da24e6c2b4fd3bfdf25e *R/add_boundary_penalties.R
c0027a24c6229bda5e3e9231752d2bf1 *R/add_cbc_solver.R
92c24fb92eb5ca5be273e12a836d947a *R/add_connectivity_penalties.R
6fbc399e1216fa3627b82e3bae6df0bb *R/add_contiguity_constraints.R
a98b70c1c8fe7c1582150a01bfd85054 *R/add_cplex_solver.R
c2af146463ac075fb29522499f05d248 *R/add_cuts_portfolio.R
8e30903522db6d38b9ffa18d35d8d6c3 *R/add_default_decisions.R
4ed41efac9d144385f558b5ad8a71891 *R/add_default_objective.R
44b41fc742800e08b4d62ac56bd869d8 *R/add_default_portfolio.R
febd73f589472f0e46a80283f75c74e4 *R/add_default_solver.R
5985128b8870e4f808bc49dc5847c6e6 *R/add_default_targets.R
ea36a3f8d0e00e22a12aa4f925559281 *R/add_extra_portfolio.R
d7b0dc551cc67f39be448607fc390b91 *R/add_feature_contiguity_constraints.R
ceb670e41626b035b1d007ad5e75ab03 *R/add_feature_weights.R
b8b1d268403bbe48a6d7481473426395 *R/add_gap_portfolio.R
e0ba82784a6e06a5b842106a1de5a67f *R/add_gurobi_solver.R
e16d8a592d771e4c2c3838123fd2519d *R/add_linear_penalties.R
9f29cb4887b2141c273bfb63c29299dd *R/add_locked_in_constraints.R
b98e7a4caff831f309f4debb3ff6f58d *R/add_locked_out_constraints.R
ba4c24d5bbff67c14bd8b5ed6a20a67e *R/add_loglinear_targets.R
ea88974b60791febb3b9cf13f65dd371 *R/add_lpsymphony_solver.R
0741b22914c41a1bb08c0cec9ffd5b12 *R/add_mandatory_allocation_constraints.R
8ad9d88298140ee82c359075d292e62f *R/add_manual_bounded_constraints.R
b4cf6f0b41d0ee981ac396992d494ca2 *R/add_manual_locked_constraints.R
4caa4bae400bda135856b3c3cfbfdd57 *R/add_manual_targets.R
9b7bacd44883b86eb3ed1ed98ca859db *R/add_max_cover_objective.R
871bc419491d435cb52e55f461b6d72a *R/add_max_features_objective.R
aeb6856c9eccbea3867e72286792329b *R/add_max_phylo_div_objective.R
ef5e93fed7674d45bb040ee5c76390e4 *R/add_max_phylo_end_objective.R
b68dbb2fd5ef375af30094262651b0ed *R/add_max_utility_objective.R
dd81442090599a47c57bddd651f752c6 *R/add_min_largest_shortfall_objective.R
bd781ecfc4d8389762bd1902984236bc *R/add_min_set_objective.R
9c452c8260b8d7b1333fd3385890ad6f *R/add_min_shortfall_objective.R
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41b475e9f2b26ef121a0b04d83c7452c *R/add_proportion_decisions.R
4afcb842b56ed5967bbcee7774e7c04f *R/add_relative_targets.R
464e9376c7b2b1d93895627df9dce874 *R/add_rsymphony_solver.R
de044d81b3b20cc886be8d8c9541f98c *R/add_semicontinuous_decisions.R
beb937a1d8effe95781b1ce23b63f8bf *R/add_shuffle_portfolio.R
2fd340ef776e6885a78913a9c68f4bde *R/add_top_portfolio.R
d3874d2de81cf34862391841881c86c4 *R/adjacency_matrix.R
b7e6bc3a84158217e563b10e7e00da32 *R/binary_stack.R
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f7f940a9f37573a4756c0a14fe334e6a *R/branch_matrix.R
4acdd89d342a4d4d2400b8489caa59da *R/category_layer.R
0385ba179b992c726d47636e7d5ceedc *R/category_vector.R
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4e639da6140d7547fc2974c20ccf5a3b *R/data.R
b47fc243ce38b3df669e4455e3c99909 *R/decisions.R
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93b0325a5e34a7a6f4d766bfa776a806 *R/eval_replacement_importance.R
bb8bee27f6f81d654a1e35ec09e81ac0 *R/eval_target_coverage_summary.R
a110018b0432166f80a6a7ca0f4f0ccd *R/fast_extract.R
8581e576e3a8a90527f3aa7953327e06 *R/feature_abundances.R
c7932f3a4dbfd33022c5c73733a1d225 *R/feature_names.R
156ab9b5c23dcdf91ab5c7065d538814 *R/importance.R
0bfbd1a3263d2055667abd531382dc18 *R/internal.R
a09f832451f66f229835d2edf6cc87b1 *R/intersecting_units.R
88cd0bd5d797d02800aa336adec4c141 *R/loglinear_interpolation.R
14210f652d616d276451923c4a3f5e3e *R/magrittr-operators.R
c5be25a66581c858edb5f29d5f585c88 *R/marxan_boundary_data_to_matrix.R
dd7cdb0e7b7184945906dab894645dcc *R/marxan_problem.R
4e19f4204e52c647b04a2b77a794692d *R/misc.R
1db8ba563e6b2b54c63ab82f1d7587e6 *R/new_optimization_problem.R
5207933655eea7a602a0caebaf76fdc0 *R/number_of_features.R
21a2c84a5b7b9a32e61da3bc0f2550bd *R/number_of_planning_units.R
c163e3f280d3f4c36036ec33fd74cda9 *R/number_of_total_units.R
f747c2f1f4c277ce34a8f0593ae7f350 *R/number_of_zones.R
b7270248ad19056f533756d792bc4daa *R/objectives.R
dcfaadcd209e341620dce3d96171e891 *R/package.R
35a2a306673719708f3b144683421dad *R/parameters.R
6fde391bcfe1e017e0580cd9905b456a *R/penalties.R
d33353a439ff35ce4fa0c5373fbdf058 *R/planning_unit_solution_status.R
6602b951e7591cd7a477481024f55fe1 *R/portfolios.R
252325417fac4d1e581b6de493d217f5 *R/pproto.R
aa62b3ef026e9e9b1786cc5de3e4aa57 *R/predefined_optimization_problem.R
4d1b723321219a8cf08407c227fb9392 *R/presolve_check.R
642d42907c88d5ef77a8a9463a3c69fe *R/print.R
afdb8dad5de71ba0f24749872ff7620c *R/problem.R
659595e1cb1cc5cb353c717764913114 *R/proximity_matrix.R
2190be22b0bbcff39295a0b100836708 *R/rij_matrix.R
49e44c89fd6dfefd1b62f01be2273f4b *R/run_calculations.R
e3be7fbfe1b4e30491122440e11716c1 *R/sf.R
5c46ef3020e9e0146444eb1f8ece4f04 *R/show.R
9fba4b636470c7d78f5241f8ea77f53c *R/simulate.R
a9630fd3626b85dcbe2f4c1fb6dc19ed *R/solve.R
b71f37c0b78a30c20f1d33768e307908 *R/solvers.R
c23697e44ec88bd79a2d2d0adc335218 *R/summaries.R
6a4a64a28a3142e3166d4b3232caac47 *R/targets.R
e7cf50496e6df0094054ca609f657cbc *R/tbl_df.R
fb78fa2a4344efa3b4bcd92eff5e2477 *R/waiver.R
2b8d05581d5e63aed9056e72619ba3c6 *R/write_problem.R
7a8458cf9884e91e7ede9a9d2ab79b6c *R/zone_names.R
af9eee376328a19cbf400535f81f0e88 *R/zones.R
1fe53f47df3e2cede733b490a58e6188 *R/zzz.R
781ae26a168464f50b5e9663ec8f85cb *README.md
3dfaae2c8b4e24a1183b2cdb12065a18 *build/partial.rdb
a206b7ee8e5e0378e9452d8478eef4e7 *build/vignette.rds
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9e8e7be1435e1eba80a79a96298da4a2 *data/sim_locked_out_raster.rda
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6a53394302ea603a29d0016dff3a387c *data/sim_pu_points.rda
5570a2dd0a63b5113e540b7e18ee0e1f *data/sim_pu_polygons.rda
bc74525c834c22f9749b4605ce5fba70 *data/sim_pu_raster.rda
b4c54fd01fd73e8c626456fc02bee37e *data/sim_pu_sf.rda
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11585116b3de91dda4f47cd548cb4122 *data/sim_pu_zones_sf.rda
4bb39749507ab067fa79aebd4858e9eb *data/sim_pu_zones_stack.rda
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7f3c536b46c20f3ac5eef9173e27138e *inst/doc/zones.Rmd
0aa0cf471b4a71ada447448c7b781a45 *inst/doc/zones.html
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e8a7be9288ba290203ac531bd0e0a57e *inst/extdata/input/bound.dat
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902f71003828c9bc0965e0f0c0513de6 *inst/extdata/input/spec.dat
e4ad77d4612060a112c9abf26054bc9b *inst/extdata/simulate_data.R
1de67ba0294ce0ebd1b44eb397f1514b *inst/testdata/rij.rds
33c95ba0a3bb340ffb3c5e4c4688b3c5 *inst/testdata/scores.rds
f5f384d71b88e4902416f95bed771529 *inst/testdata/targets.rds
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110c19f9bb534ff8f8fc56fabe330d40 *man/Collection-class.Rd
918a9feedabf511e1d396fed89e34512 *man/ConservationModifier-class.Rd
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98ab8f16f8316b334792d8d6bad9fa0f *man/Constraint-class.Rd
a8fae920c92c767a9635165700599eea *man/Decision-class.Rd
6be1b1a82e1efd0e5d753ca410eaa299 *man/MiscParameter-class.Rd
08a4b950bc61c1392beffb5e4fcf6764 *man/Objective-class.Rd
889233f90b21ed388ad9bb168ca18e70 *man/OptimizationProblem-class.Rd
2494ab345f5f495157fc259bc49f7734 *man/OptimizationProblem-methods.Rd
3e83c47ba6dbb1ef5e3dcf05d707c553 *man/Parameter-class.Rd
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1ae90f0ea49b58bc8351a95c319de54c *man/Penalty-class.Rd
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20b5a4f85dc6b3806c53f45865f4e57d *man/add_cbc_solver.Rd
ed5aeb1900492d074d44c90c7106e310 *man/add_connectivity_penalties.Rd
6cbe7b2a13dd049c41de7aa9e236c7d4 *man/add_contiguity_constraints.Rd
9c1225809786046312cd9f30bcd3b4ce *man/add_cplex_solver.Rd
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3f35f41903a4ec33a176e0ec2df06d03 *man/add_extra_portfolio.Rd
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59245e9ccd04e26da49d54ef6c2b681b *man/add_feature_weights.Rd
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e596b2772c283864d2ada5febb8faf99 *man/add_gurobi_solver.Rd
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478b854f52a72436d7bb6a7421cf6407 *man/add_max_cover_objective.Rd
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7b214538fbee82d487af6dabd6b25370 *man/add_max_phylo_div_objective.Rd
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