330fb69a5b15996efc92dab61b0afcd0 *DESCRIPTION
981f47abfc0285441c06478b506ffe86 *NAMESPACE
18373823d2c78454b010364e725db530 *NEWS.md
5d7d5aaeacdcbb2b7c94e2a7a12c8283 *R/MRCA-methods.R
06ec399498638dc653a3a0ce8ef3ae5c *R/RcppExports.R
ee8ad14745e24da2f0ab9ce624116e73 *R/addData-methods.R
7c7821d59f2f2fc11a09163747a50d94 *R/ancestors.R
f60e16beb8a5551c2c08e486d963c2a7 *R/checkdata.R
cf200a46cf69d04f04f6b31c80c75bb1 *R/edgeLength-methods.R
9edcd964c68d44867b019abe4105f093 *R/extractTree.R
ad9a4f02a254be9bb954601faa4f58c8 *R/formatData.R
c91b1a7bbcea7047e0370985bbcf4d44 *R/getNode-methods.R
182ac8ec6285e37b88a9da9c7e1106fa *R/internal-constructors.R
7bd80915399baa2675528dfed8b193e1 *R/labels-methods.R
cb2282bb40632e8f7039991482938d11 *R/multiphylo4-class.R
97bef8bb049e23553a30e9c00f07d6f5 *R/nodeId-methods.R
c0e2782404632e4e3420ac9520a7eb67 *R/oldclasses-class.R
016336404f44444178d488798ae5607c *R/pdata.R
871f687a6a4c9e2b3ca3c7ce787dcc4a *R/phylo4-accessors.R
4bebc32d3934dce824c054b0ce549be3 *R/phylo4-class.R
be1814a94cc3b26b66451f236b67cedc *R/phylo4-methods.R
3a740fa03aa3940f253b321e006fa157 *R/phylo4d-accessors.R
d28d5cb63f628bc8cf032d226857ceb1 *R/phylo4d-class.R
5b819eb1baba862ef00527d2a4a7aedc *R/phylo4d-methods.R
68a69fcd456d7872a093e31d87f02f62 *R/phylobase-package.R
6cfe1b8f4fa6b546480b9b0917e8884b *R/phylobase.options.R
0c1561e5ae25e50f5811a863450a878e *R/phylomats-class.R
3814790468f7b47f335c4ba0316150ed *R/print-methods.R
3c625fbec9acfd9826bf6a58c49f3da1 *R/readNCL.R
c01c34a9709736825a787cd382300038 *R/reorder-methods.R
af36b2ab79cdce9ab7f1c51b99a9120c *R/root-methods.R
874083ceb7ff2a63d4e31e2dfa9b3f6f *R/setAs-methods.R
b12e60d130b8617e92ece7cd5e2faa08 *R/shortestPath-methods.R
cf9d240b5b1eeb9312006175b241d61c *R/subset-methods.R
ddb1f86ef610780a336bdf7473b1cb69 *R/summary-methods.R
957d6bb59eea50e691c3411bd7c8a455 *R/tbind.R
54333801e92f6320240187986cf19887 *R/tdata-methods.R
ac8d76f9276a5cbbd840dcaba29d44ff *R/treePlot.R
a3451a2d297b035ecf6561a4fdb3ae28 *R/treestruc.R
38747d50f18ac2b910afecf24ed1d92c *R/zzz.R
bf223fcdbf9223b4c9f570b01abc4efa *build/vignette.rds
7a03af7f836f7bff48f5b9dc83b28ca8 *data/geospiza.rda
8a843dd8cd966030b246f06adee0ac13 *data/geospiza_raw.rda
26e3cdf5f9480147fd9ef4a3f8b75c3b *data/owls4.rda
a7c04f77c4e9ddd2a430207cbaea7281 *inst/doc/phylobase.Rnw
d3572e0ea0a35b93931faf4bbec22a18 *inst/doc/phylobase.pdf
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9d27abaf6517ea4ca9881bd9f8c0032a *inst/nexusfiles/treeWithDiscAndContData.nex
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04e5f4a2809ce109b3b2999a3ecde326 *man/MRCA.Rd
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795335790027904e88e7946a93c8ad05 *man/nTips-methods.Rd
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07341cdd00d7e1df944a9fba3bd96a97 *man/owls4.Rd
594fa4d41e306b87fb2496ec85e9c594 *man/pdata-class.Rd
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f7e411e493dc2473e8e0418099e86771 *man/phylo4-methods.Rd
5e886d568c6467458476da69a5fc39ce *man/phylo4d-accessors.Rd
572c7a97af9108e3ae06804cb86cab11 *man/phylo4d-class.Rd
80ab0959ccec1dc6f75c8f35fe20c85a *man/phylo4d-methods.Rd
94ee6c8789ba0fca55ec31685dedb76c *man/phyloXXYY.Rd
1690dd737993c2e7401c51bc8471dcf5 *man/phylobase-package.Rd
06a8d2a21a74fcba5e03065edf374007 *man/phylobase.options.Rd
df4471377be0aa5324ddb704f09b6950 *man/phylobubbles.Rd
42135b09f396cc62bff37f94e0f0db41 *man/phylomat-class.Rd
380637def076cbf345f1f48391073ccf *man/plotOneTree.Rd
07292641180898274c8113e444e3ce01 *man/print-methods.Rd
99482e075bd0995e4c56efdecdc1757a *man/readNexus.Rd
e333008809c545779fd14f7990536aec *man/reorder-methods.Rd
c01ee01e069ab35f309a2b44e6b26fff *man/root-methods.Rd
20ad57a00ce2228244611dd754e0a68f *man/setAs-methods.Rd
f1d6352cbcf0e36bf7f5733809933d4c *man/shortestPath-methods.Rd
c056e277af64ea59d9481ee3bd240569 *man/subset-methods.Rd
592cdb40e968e8291e2a6e9aef2a086f *man/summary-methods.Rd
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509e295fc6a5363c364c8119d79f9993 *man/tip.data.plot.Rd
9f08700e5b583dfc71495cb21ee75857 *man/treePlot-methods.Rd
55a639c48784ea9ed603a52fc2f050a0 *man/treeStructure-methods.Rd
ed0d19722e28a7d316256f2c247be33e *src/Makevars
1e0cc7f2ea27756865f63d6758ca90a8 *src/Makevars.win
e1ca24a85a7bfd1c19cede5892031e25 *src/RcppExports.cpp
15cbb15a89b490dedacabf4c4d3f29c9 *src/ancestors.c
c78cc56ae6c035ed9a0a584424eac960 *src/checkPhylo4.cpp
b06c8e98609078f1734f5c5b0614ca43 *src/descendants.c
1b1d0ecd28d6eb26a29fc576091cc5c3 *src/phyloXX.c
dc5efccf4d370c4c7b0801bcbfd74a9b *src/reorderBinary.c
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cb2ef3c2e0613221c053e3236b36debd *tests/misctests.R
9f8cda1294f43f665a0a96aa7b7f7977 *tests/phylo4dtests.R
fd985e3b18ff2d41e3c213f8b9418f27 *tests/phylosubtest.R
db2a0aaf0280429619fb99b2855c835e *tests/phylotorture.R
647bb8fbf0e8266427210598fc3fd21a *tests/plottest.R
c08c45b2d046fc6386a34c9fe78aea51 *tests/roundtrip.R
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e1d0fada9b7ed61564f9fb1570d02f4f *tests/testthat/test.prune.R
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ea0cce4681edbf1067b681bd89327c50 *tests/testthat/test.setAs-Methods.R
37b1df7381866235003e027eff81e2c7 *tests/testthat/test.subset.R
7ce9e14f01d0b524e56ec238d90275e0 *tests/testthat/test.tbind.R
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7020fbe04de6da74f575a83039235325 *tests/testthat/test.treestruc.R
521ece6dcb763bcbfd39c327fff884e2 *tests/testthat/test.treewalk.R
f3f850c2fd5df4c58e5802d2e8ad01b5 *vignettes/auto/developer.el
be9341670d0583a8d5e6292441df0659 *vignettes/auto/phylobase.el
a7c04f77c4e9ddd2a430207cbaea7281 *vignettes/phylobase.Rnw
