5aea50516f86333bd2c8c297c9ad5867 *DESCRIPTION
1f1a6145cffb325ebc25212fc98dda08 *NAMESPACE
4c737ec8d56118e1b7fdfcf81cea1658 *NEWS
fc2dc67cd12f0fa2152d2b0a4e78a445 *R/checkdata.R
786825abfb139c44d4ef6d271fac4d2b *R/class-multiphylo4.R
c0e2782404632e4e3420ac9520a7eb67 *R/class-oldclasses.R
5931ddafddee3efdbc12486b93d404b1 *R/class-phylo4.R
457fdeb133aafb1814a5f283c548d0d8 *R/class-phylo4d.R
fa1073bc2c21e96ba5adfd8f38e5a58e *R/class-phylomats.R
15ba2aceffea7dee2cedf18aec932b01 *R/formatData.R
d41d8cd98f00b204e9800998ecf8427e *R/methods-multiphylo4.R
9f2a0e17e44c9fa3c614c5802cc39668 *R/methods-oldclasses.R
37a0d2d1d6a8feb7c42ede61c5fd51f9 *R/methods-phylo4.R
6abf75e284e5f3d98a62a300cf6f86e7 *R/methods-phylo4d.R
c1d35c0429edaa72d985736124245db9 *R/pdata.R
a5ed29295d08b71d41c3f7b4004f469f *R/phylo4.R
81038dfbe732ec6615e9b4a8757cb5c7 *R/phylobase.options.R
919178c29c6f2774e7aef61ce8ec32c1 *R/prune.R
0b69a76acfd500036d044ac3cde33c63 *R/readNCL.R
25ecfe10ec0bd001614b895510ec9715 *R/setAs-Methods.R
d52de19b321917cedf2f0f4d85b3b849 *R/subset.R
957d6bb59eea50e691c3411bd7c8a455 *R/tbind.R
c90e9f67f63d59e619c98fec508e2c9c *R/treePlot.R
3867680e0d0bb9df5be64341da4d184c *R/treestruc.R
ee77b5b71e21e180506f75448d522a39 *R/treewalk.R
985334ad123c94c5da976827785c7cc6 *R/zzz.R
ff30585b1cc83536fb4e522c883d3712 *TODO
c31da14d64f9037d8cf1783fa6627be5 *cleanup
7a03af7f836f7bff48f5b9dc83b28ca8 *data/geospiza.rda
8a843dd8cd966030b246f06adee0ac13 *data/geospiza_raw.rda
26e3cdf5f9480147fd9ef4a3f8b75c3b *data/owls4.rda
c96b8393e74836b5edecfa0ea100121a *inst/doc/developer.Rnw
3ca561e3da2d6ef2d701bfb13487527b *inst/doc/developer.pdf
0beab0eea1bd99ef8c932c7fc4b25f1e *inst/doc/phylobase.Rnw
14023bc60e82ed6c3eb8242aa41c00dd *inst/doc/phylobase.pdf
1fff9fa62be103e818e88abf156ffacb *inst/nexusfiles/ExContData.Rdata
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5f0f9c95e0d4597b1ece4f86d355d46f *inst/nexusfiles/multiLines.Rdata
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9d27abaf6517ea4ca9881bd9f8c0032a *inst/nexusfiles/treeWithDiscAndContData.nex
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334f0de6ed55dc79f59addf091097353 *inst/unitTests/Makefile
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8d540f61a98ccef2af93f8920618475c *inst/unitTests/runit.checkdata.R
a6fc45ff0144e1df01c424839b0b0707 *inst/unitTests/runit.class-phylo4.R
22093c976c27f764cb70116947745263 *inst/unitTests/runit.class-phylo4d.R
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e74972608b81188995e03adc55c7e79b *inst/unitTests/runit.methods-phylo4.R
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16a2490f1c8321a19d01103061306f28 *inst/unitTests/runit.phylobase.options.R
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bb7c27cacdce3708654ac9621df90f44 *inst/unitTests/runit.readNCL.R
17415b523beaabadfd325fd9c28c41bc *inst/unitTests/runit.setAs-Methods.R
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768a7b46d2a8715d159c319a0e096162 *man/hasSingles.Rd
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669f117f49e9f1293e36b77f96c5ee80 *man/phylo4d-display.Rd
b1f47cc0b622c67ad9b9737bef05d77d *man/phylo4d-hasData.Rd
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10b5c050557c6b76d53e8f6443a5015b *man/phylo4d.Rd
bf16fccf990ca8e224572ec3ca8294e1 *man/phyloXXYY.Rd
489ebf1a48bba1d1c22d9d262e1a54af *man/phylobase-package.Rd
2e1bd340689db7f7dcf6dc6be718db20 *man/phylobase.options.Rd
2666328cfe0b294449d2122d1b140cb0 *man/phylobubbles.Rd
bc6e7107f8d22ec0048e8ba5688eea0d *man/phylog.Rd
79d9259f155627ce71fd182ae9c29af2 *man/phylomat-class.Rd
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1878d80a08c81a262f4fcdd181a4e29d *man/readNCL.Rd
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0dcecd2d264805b46624006035ac64cb *misc/pdata.R
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15cbb15a89b490dedacabf4c4d3f29c9 *src/ancestors.c
b06c8e98609078f1734f5c5b0614ca43 *src/descendants.c
87210b76102c11d0a2890f10494bf75c *src/ncl/ncl.h
693c38f98d7c4292b1c02b5903e67ea6 *src/ncl/nxsallocatematrix.h
18810e4eb35360b4d29e339455031321 *src/ncl/nxsassumptionsblock.h
44f64b8ad1dae0551e55f5dd52842bbf *src/ncl/nxsblock.h
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02cbf0a74d2b48ae5dbf54dec8ee49f0 *src/ncl/nxscxxdiscretematrix.h
c4940f98805f48981da09e891b3fc494 *src/ncl/nxsdatablock.h
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52c9a053a25da412005439664e0597b1 *src/ncl/nxsdistancesblock.h
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1d9648bfe5d30828ca3a3ded00158d90 *src/ncl/nxsunalignedblock.h
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