d6f65663ae0fc325418628177fd63839 *DESCRIPTION
04fd36cecaaef425e9c881893fcdd5b2 *NAMESPACE
0e55ca9384035750c5528fd95cedc638 *NEWS
dd97d3e7404f18ce6be9418500744002 *R/Gplot-internals.R
0d3f08e5b8d92c986f8c6e5e7763c9ef *R/Gplot.R
713fba6d2a385de9e729dc1074071b63 *R/internals.R
cb7c4936241698842df49b131890a7d0 *R/paloma.R
eaa6854994a043ea370be8d0effe80a5 *R/plot.paloma.exceptional.R
f07bee824052e81484a85116bb6e7a1a *R/util.R
508c9237cdbda647f89c8cf5a4dd7f39 *R/zzz.R
d075dc611ce7126afe6acefd8ad39ed5 *data/example.rdata
fe1fc57935c6be3d8d5f971beb15d4ed *data/yeast.rdata
8175cad261f117288fbb1e3750882442 *demo/00Index
f345f4a3212f13624eced3a5cdd1b62f *demo/read_graphs.R
6ba994746c645b617cd1e1ece93a9e44 *demo/yeast.R
b3fd2c8a73df25c101d1c20f4d742635 *inst/networks/example.txt
6e5a1b1c95fb1abfb891a64f67f9b7eb *man/computeModelMean.Rd
62f36c255c393323efe39bd47264d6b3 *man/countAllMotifs.Rd
13726f45e4df7bf7aaf715be8d6067f0 *man/data-example.Rd
3eba625a11a31ea4493e00e1d4e58bfe *man/data-yeast.Rd
a49ea188493ca25755aebbaa4cde25b9 *man/getAllExtensions.Rd
16527aaf4f4f62e437efa4f42199992b *man/getCanonic.Rd
b7755be97ef453d42a8c98ae3f436ba0 *man/getExceptional.Rd
566fe08817574c916a0aaab1c0abad5a *man/getExtensions.Rd
402e9599e95ad8ed26044977c47f6546 *man/paloma-package.Rd
95ce2d035037cf4956e33a4db34da3cb *man/plot.exceptional.motif.Rd
58ab2d5a492442f2f63c2873ecb5de4b *man/print.exceptional.motif.Rd
9d68906e8b9222e36dc1b2df857ef8bf *man/print.occurrences.Rd
be00ee8525ce384157decf97f2425824 *src/Makevars
ed27d54bf18f63feffd5aa40da0ea2b3 *src/block-alloc.h
83716877db10ebc2384cab59a9c2b94e *src/combinatorics.cpp
ca3261d3b24648e6c90f610c3d33f112 *src/combinatorics.h
2882545c13cfa2a1bbee93d253e26c27 *src/common-matrix.h
ca8d3fb0eac370f36f3ca03d8405073d *src/concentration.cpp
33954ede89e511ae30fcfe33acb27d5e *src/concentration.h
59e116344783873ee7c2f251f11a4549 *src/graphical-models.cpp
2f7d019d68a6dfe82b9022d75807a153 *src/graphical-models.h
f545a0e8081d48be6bd0cd6730958771 *src/gtools.h
2c4a6527affb92965d3add2dd26f3bd0 *src/heap-union.h
164fe02c559b3f9694f8d498e3f0ee37 *src/heap.cpp
781c6dd33e81a969377ff2c2603fa93d *src/heap.h
0ac2570333c62a65c9f7113cdd3eb9c8 *src/interface_R_cpp.cpp
9f020be9cf2f20640a6c0c143805159f *src/interface_R_cpp.h
df446ee0b103f9f3bf43fb038176879c *src/motif-search.cpp
c27f46b79d58875128f27546bc26a91d *src/motif-search.h
61d909e774e85673c0c760f98b7819b4 *src/motif-tree.cpp
c8dc897fd07472672ba297e1d0559416 *src/motif-tree.h
3ad0e481c0450c10a454db8077dbdb92 *src/naugraph.c
0a6620ef21c616054c52d8d0218008c8 *src/nautil.c
59c4b3afaeb588c5f150283b1dbfdcb7 *src/nautinv.c
1580d86af5e687c58580f957a3b99926 *src/nautinv.h
1ef8019f6a0cf0afc391a5f6b1fbd505 *src/naututil.h
350639ee1e62584360fba5f1bf3a4c5e *src/nauty.c
45419a0b697505651ad0c6af91149cd6 *src/nauty.h
947d10f6e6e0d1dd4400ea94c4e96b27 *src/nauty_interface.cpp
f93214d9b41a6b5d018994e7d5d8e94e *src/nauty_interface.h
80898c0e6ed725fcf1aafe39f916f5c2 *src/nr-permutation.cpp
2c34d10111648c36a506e436b0eb49d5 *src/nr-permutation.h
958f51dfb84a2d2bb89420fef6279a7a *src/shrink.cpp
f2e9e71c5dbc5817e589b67ca1201b04 *src/shrink.h
ce3c6407b53d447d5a50aa4434f85dbc *src/sparse-adjacency.h
60aea6d60e7bebd378066357281855e1 *src/util.cpp
6ecdb6d094b66325def84788c5b6bff4 *src/util.h
fa727cb212625d5e24223c1f16607c28 *src/vertex_layout.c
