6c96f0048fcec3e3fbd5041629c9f2b5 *DESCRIPTION
6e3766e8f9d0a17a54c31801da5dfcff *NAMESPACE
6c8b4bbe7cb66ca20c040f12960e5bba *NEWS.md
353793cf50460a4ffb3f8775e15648b5 *R/NetGSA.R
7c526e46001866fdb35d3bf333c07788 *R/NetGSAq.R
3203dde804d4446bd6228fbbf0e8a34b *R/RcppExports.R
bcbdd02c151e51d18c40ba08bf270954 *R/adj2inf.R
b5765ad5292581bb7e2e6605992d1498 *R/approxVarEst.R
b28b0ab95d679bfede455c7daed2968c *R/bic.netEst.undir.R
4ba29a3b50942964791b4408d9378414 *R/call.netgsa.R
523f9bb9bdd9aa999e224c96c1a5ef0e *R/data.R
e3d43576fe67645aec5073030f982029 *R/glmnet.soft.R
7b718b0e9956da4ac2258adca91c07da *R/graphlaplacian.R
adaa55e54398f8d5e9033cb26f44c957 *R/he_method.R
eeafa35d11ab880510da7b0e5c344181 *R/matTr.R
09e3e74e1dbf09c6b6221e3f079b9c82 *R/netEst.dir.R
08d442ca0f01b3e96e053e1cfef0d6d9 *R/netEst.undir.R
4bb3580f21ea6cac3b72e3d5c1a90dc1 *R/netgsa-internal.R
8debb21b0149b8a617020603cb56d5d8 *R/netgsa.ftest.R
cde642e9fb5dbcb3b0437c2214b0227f *R/netgsa.onesample.R
2aeeb56c68040fc9c5b5ebeada79975f *R/netgsa.ttest.R
25fb2df43ebbad61bcd1fcb65ed1dd77 *R/newton.R
864c9abaf70457df2df4f92c97d5acea *R/normalizeAdj.R
9d5451a237163fd335f246ac74493562 *R/obtainEdgeList.R
a709f7ec3433fe656263e9b5f957a18b *R/plot.NetGSA.R
6ab46a3a85ad4d34848c9b46abe1a518 *R/prepareAdjMat.R
c09fcb5a8802a5fa6f1ff4e0c23283d8 *R/preparePathways.R
30b8654a3c31085bd9fce6b1ad5b041a *R/profile.newton.se.R
57494c38a760fee705c0336bad365c57 *R/zeroInd.R
e018470519d9b9705692652e8b0adb56 *README.md
8faf250d78a120ba4c7ea2186efddd24 *build/partial.rdb
661b8668ce64fac5db99f6e184edd349 *build/vignette.rds
a51792ef269dfff8e09ef103a43b4f87 *data/breastcancer2012_subset.rda
39c89c23279df2e7766f9116d6c19bb7 *inst/doc/netgsa.R
19b8a6f2777d42fc88a30169a3b2f8c4 *inst/doc/netgsa.Rmd
ede28e341ed5eea038fa88300c1a1342 *inst/doc/netgsa.html
de3dc0c78c156cd07163eb3d48326521 *man/NetGSA.Rd
28174aabf0f354c40fb56f5e0874f598 *man/NetGSAq.Rd
497529709bf069fdcf7e9dbc7beb55d7 *man/bic.netEst.undir.Rd
d10c11a8f2981acbc165ebef81466f25 *man/breastcancer2012_subset.Rd
c8691851128939c33d57a849db822f1d *man/edgelist.Rd
370f3944d58a44a9a1a3181555498468 *man/formatPathways.Rd
924064b0fd3ac3546d6d57f40bc42c4e *man/group.Rd
6f568b70302d612c7c6be365b19a94cb *man/netEst.dir.Rd
a31334f26e9ac3501f65f8c201357fd5 *man/netEst.undir.Rd
5e2a6ec701a8b67cc47bc439b04518e8 *man/netgsa-package.Rd
360e1217c94364cb2b7a69c6098a10f2 *man/nonedgelist.Rd
a394b4f7d0bcd210fd3b3763f57c1df0 *man/obtainClusters.Rd
95f28f519f55976f4aa52c035aa1bef5 *man/obtainEdgeList.Rd
22fe3b61619e60ce7487b94976e73b40 *man/pathways.Rd
7edcf94e6829be53f84eb2782c3d9039 *man/pathways_mat.Rd
ff70ab85749336f6d7c8460cd75e3db3 *man/plot.NetGSA.Rd
187b8673413b2333dffb38fe700dc34d *man/prepareAdjMat.Rd
87c7aafc9fd7f77f72243ba37f227430 *man/stackDatabases.Rd
5effcc741bcb65ab016912d9d5aa99e6 *man/x.Rd
75a1b63d305727f216083bc1702ffdf6 *man/zoomPathway.Rd
b4f0b014ec53404e843dbc718fabf57e *src/Makevars
b4f0b014ec53404e843dbc718fabf57e *src/Makevars.win
5afeee562509388a0facd11ea263c269 *src/RcppExports.cpp
83bd3d63555d821566b8e40cb6a49df7 *src/rcpp_lin_alg.cpp
bd30e16128f2283dbd011f472a3fa863 *vignettes/bibli.bib
9711331cb25356aca5ab4b56ce65e1f1 *vignettes/cyto_erbb.png
0ba6343fb9c74b0627709d82770174a8 *vignettes/cyto_legend.png
1bd02a042ffd4a5df595644bbe07a9af *vignettes/cyto_pathway_network_default.png
85d19e6cf1185873f0c629c46cb7bafa *vignettes/edgelist.txt
3f2a557ffd3582eedfcca9ee39a2cb8e *vignettes/igraph_cyto_pathway_network_default.png
67bbdd557589ce796d40190b3812b6f4 *vignettes/igraph_erbb.png
2a5732b977b3de7c0de8de1fa0f8b680 *vignettes/igraph_legend.png
c84bc052743c78bf7dd2c6eb35126167 *vignettes/igraph_pathway_network_default.png
19b8a6f2777d42fc88a30169a3b2f8c4 *vignettes/netgsa.Rmd
dad81e70183002b80b04ef5f2ef5be66 *vignettes/nonedgelist.txt
