ae5995bba3c09ffea756d80f18d61a12 *DESCRIPTION
15317c4087f94fa7198e1687ffa7f4bf *NAMESPACE
278da97b5a9f1dd767884c94f7f5b706 *R/CollapseReplicates.R
e8913006e2f1bbcdd564fedf03214659 *R/EarlyConservationTest.R
ec633051f60475aed286e7ce2e949be4 *R/FilterRNASeqCT.R
f8f7c5113e717688db9c2c8363f4d4f2 *R/FlatLineTest.R
21edf4d39d45f4ca76dafd1ed3ff7feb *R/PlotBarRE.R
c2f5adb9c544618498c2a6090e03de8e *R/PlotCorrelation.R
6aa48b22688057fac455da21f84a134e *R/PlotDistribution.R
7fd8e75ee04d102be4ef3347b3e6e020 *R/PlotMeans.R
2e10daddd4a8c2eeca606d15ab1e5969 *R/PlotPattern.R
ce3b0347da295467a54fc3ddc62ecf84 *R/PlotRE.R
f4e1f52e3c789d4b04a8038c5513f2ad *R/RcppExports.R
c0d91bf300e9fd45ca1900293763dfaa *R/ReductiveHourglassTest.R
8a2f6efe63591b24d8bef16474fee9c6 *R/TAI.R
a77cf0ac74c6b881916d3b34710431d2 *R/TDI.R
d90c0c9fd3b726e0ba39b8de3291cac4 *R/age.apply.R
62fed658628d96b0c72cfdb60c64b568 *R/base.R
d92caa80b67f085f1d2b797998e261be *R/bootMatrix.R
c5e6a55f5c51d759866915feb4ff404b *R/combinatorialSignificance.R
a8b885d42cf199ea8da7f98bfa6636d6 *R/datasets.R
133ea0d3f0b607620a8356d52e004f19 *R/ecScore.R
5d9a83e801d04e07220a6b2fcc43cc8f *R/pMatrix.R
9b773d29fc0fa9263bd760ec6de5040e *R/pStrata.R
b97b60780c222a7803157b2faf22b964 *R/rel_exp.R
a550fccfa1a503a682caca3dfd94bc0b *R/rhScore.R
ef3f001ec76e871efadada2ec28d8fb9 *R/tf.R
0ca4535714b501c0a1b1b103c21e2df7 *README.md
029709d0b87e56ee80970f22082dfb07 *build/vignette.rds
40cdca4ecf918521bc1c1f01e90ecdd9 *data/DivergenceExpressionSetExample.rda
42454c557a67403f4a652f2b8142af72 *data/PhyloExpressionSetExample.rda
c5c26b2a2802567de070fe4d142f536c *data/datalist
5e545bfb6097c7421803c11cd727a00d *inst/doc/Advanced.R
ed716e3e30bde8858e284ede2c8eb1a6 *inst/doc/Advanced.Rmd
9c69d06e8a49a97300de034e6ba4bda2 *inst/doc/Advanced.html
949e0fe60821342817b0bdfe9f4eb58a *inst/doc/Intermediate.R
cad5d99eaf3a67df572be39bc707340d *inst/doc/Intermediate.Rmd
ecd7aa9aff044cd21cc065cb6b75c0c3 *inst/doc/Intermediate.html
8610052e033fd47802581c98e3fc8ade *inst/doc/Introduction.R
dd5da3fca43c93bba1d6ef4a6d2e8856 *inst/doc/Introduction.Rmd
a9680644be5a2fb840fcf009ff05b81d *inst/doc/Introduction.html
9bdaaaf76b3506644ce3ef9c7f93a50c *man/CollapseReplicates.Rd
60a789cfbd9f8b52dd0a90e89b7f9241 *man/CombinatorialSignificance.Rd
fc6e3a253b0346f93f0d9d08ae14fecd *man/DivergenceExpressionSetExample.Rd
905e80f0c8309509f01f91afd75ab280 *man/EarlyConservationTest.Rd
291ff94a60cafbf9c92c3fbfe5fd4142 *man/FilterRNASeqCT.Rd
a3ebe8c28012b7a675aa545ede5fdeb1 *man/FlatLineTest.Rd
6370670b8a7e7c48abac8d657e604c70 *man/MatchMap.Rd
9cb9ae5aa3204413f7fece93f3a403a0 *man/PhyloExpressionSetExample.Rd
f60530529dbc3df79050ef301fda952d *man/PlotBarRE.Rd
5df7f520a57e7925649065217789ee0a *man/PlotCorrelation.Rd
d5039de499de2a1275596261be3c006c *man/PlotDistribution.Rd
286c7714a03cbdd1aad185a9a10230e5 *man/PlotMeans.Rd
b9fbc9a09bbae55990483f40c44c8a02 *man/PlotPattern.Rd
61a8cd6824fdbe4c0e3ef04cc7a479ce *man/PlotRE.Rd
eaf82c330417d2411923d47768adee07 *man/RE.Rd
fb9956e6b56190fcdd8754b19352d055 *man/REMatrix.Rd
8686c9123a08c7edfc29e0f8f576ccc7 *man/ReductiveHourglassTest.Rd
c4da7c6b076609021856619cc6089f45 *man/TAI.Rd
10c8f666fde80fefa09e20ecb0b61960 *man/TDI.Rd
208ed107a8c36995e917c93c3aaa3ab4 *man/age.apply.Rd
9c0135234b904b847f9b01e273141322 *man/bar.colors.Rd
6b897990ed1ba2cd067fa70bcf889c5e *man/bootMatrix.Rd
b897c2ce7c77c805d8fc7169021905aa *man/ecScore.Rd
e2d820c46b9648456163715dfc67b163 *man/is.ExpressionSet.Rd
3b7016fe2898d4a82dcfd8b74186b8a4 *man/omitMatrix.Rd
137eecad9dfe7cf3e73eb49a411895e7 *man/pMatrix.Rd
c477f40da63ef97459a468e8c53f8f25 *man/pStrata.Rd
c7348a84db82189c71e949e43954cece *man/rhScore.Rd
bb3e8f87535140f6025af65b10b7a26c *man/tf.Rd
4d3a541df1c6a9b0e682eb7d1be77e44 *src/RcppExports.cpp
6c6edcb4a618169f12d482bbb817cf11 *src/rcpp_funcs.cpp
510396716b33300779b32ff07fe0ea5c *tests/testthat.R
a500d0fe919766b31cbe8d6475862903 *tests/testthat/test-CollapseReplicates.R
c044ef4a4edd68eb58c2509a93376415 *tests/testthat/test-CombinatorialSignificance.R
5ab180f5d879aeea8fa70d7c5f1a06fc *tests/testthat/test-EarlyConservationTest.R
2f7b6e5f2eaf3b67d1fb9c897fa12019 *tests/testthat/test-FilterRNASeqCT.R
5dfc20c87e3fc94794735af5347fa1e6 *tests/testthat/test-FlatLineTest.R
29319a3fe5c8659eca3ebaf41c58e437 *tests/testthat/test-MatchMap.R
32655be30ec1c0a7596de00c5a834b65 *tests/testthat/test-PlotBarRE.R
8f6e4494a290302581c0ba59ee634206 *tests/testthat/test-PlotCorrelation.R
e5dc54a6ce910e12d999ba8132058e6a *tests/testthat/test-PlotDistribution.R
ee2a6b1ee5b3d24f4b49c946219a0922 *tests/testthat/test-PlotMeans.R
d976eae2f2af9d3b40b2e9a85ab5d303 *tests/testthat/test-PlotPattern.R
1d4fbcb11f539e8c5de20316e8839299 *tests/testthat/test-PlotRE.R
e34f61ce55dc634167af131373b57ad4 *tests/testthat/test-RE.R
f610a60f6930815774ee7a30448927e0 *tests/testthat/test-REMatrix.R
fa25bd7401801eca0a20f2135a88fee8 *tests/testthat/test-ReductiveHourglassTest.R
9ead0b269c430185999a8ac068fdad9e *tests/testthat/test-TAI.R
50940b9bd79b125f17c159da3a8f7c9d *tests/testthat/test-TDI.R
f05815c951c4fce85a2c1bc187fabaa5 *tests/testthat/test-age.apply.R
8b0362032f36b7545759658e5be62870 *tests/testthat/test-bootMatrix.R
697da6e8d268b315f0e79c09f9753e6f *tests/testthat/test-ecScore.R
906536cabb2bf0380f090da06c92ed38 *tests/testthat/test-omitMatrix.R
d5220478d07054455f1e6afeedf6000e *tests/testthat/test-pMatrix.R
5d8dca791c4288683ec1375333ab52a4 *tests/testthat/test-pStrata.R
af2fe0eaf0f925f542834d5da86d0883 *tests/testthat/test-rhScore.R
d950f4350a0602b0ab007bc0cabe1fa4 *tests/testthat/test-tf.R
ed716e3e30bde8858e284ede2c8eb1a6 *vignettes/Advanced.Rmd
cad5d99eaf3a67df572be39bc707340d *vignettes/Intermediate.Rmd
dd5da3fca43c93bba1d6ef4a6d2e8856 *vignettes/Introduction.Rmd
