79e3c1650cdd1724eaa4eb23e6215713 *CHANGES
f006a708aaedec99fbbbe752cbdcf0e5 *DESCRIPTION
331c379b5bf343ab52fe6d96047deb0f *INSTALL
7c078dcf75e5b791f8010f725410b96b *LICENSE
9fdfeb11f7ddba6f3aab9aaa6b1ac5dd *NAMESPACE
57919887e4beaa20501a631b04286c46 *R/add.heritability.q
215b987076876b0b64df35585d909892 *R/addGE.q
f17ae06baee645d81b6f54d94794c0ed *R/expand.multic.q
d2c2d5feb3a3b2f19237f92c521e3482 *R/fitted.multic.q
ef24fec36b4ea7801319695391f832ab *R/fixibd.q
cd36447989ef322a24c80cd1446c1c3c *R/gene.eff.q
fae9f28959b98873420358099d5c5b2b *R/get.max.lod.and.locus.q
34efbf3a781dd2e031e04a5487f682d7 *R/get.top.n.families.q
df0f2511b524bab7ea95ea622ea70fc8 *R/herit.se.q
8c78eee4f5adff690bae96a490fb0568 *R/load.effects.q
ed4fbc146e23f0ee574c87b155f39d15 *R/load.inv.exp.sec.der.fixed.q
55641759d76775bfce6eeb6127c1d17d *R/load.inv.exp.sec.der.random.q
13ba0ece70f164d05177fde415432683 *R/load.residuals.q
7bd01a331370fe41680313eb79d27ac8 *R/load.v.matrices.q
726da180d98fac332c3658d42e73993e *R/load.var.sandwich.q
955231872125a7ed25c800c40bda9614 *R/load.y.beta.diffs.q
4859ac2202ef8a4dbdd84f7bac4358d2 *R/mlociCut.q
827740fda4c2f99f0595cc05a3498093 *R/multic.q
ef3c72093d5ac069af0d2652f9a33ee6 *R/multic.utilities.q
fbbdba24fd027d59f1f621f35e27dd25 *R/pchisq.mix.q
6ee3ec6a37d1a74dc66c0b0daab4c4fc *R/phi2share.q
3c4dd83b58686410e4908d0d485810a7 *R/plot.family.lods.q
7e95b7761efba5b36a468e22f14fa19b *R/plot.multic.q
f002d488153a1a449181f1ea8a4a1c29 *R/polygene.q
2f550e6b0ec93628744256416bab87fd *R/print.multic.q
34b1d2003b558068a3e9acd78bd34784 *R/print.summary.multic.q
72b2854de87d707b6b9ef5d4163a4586 *R/residuals.multic.q
8c6b7127d9c910141ce4da07bd7cc105 *R/solar2mloci.q
39a65e8b75f997f0c8540062b765334a *R/solar2multic.q
a125a142b79775375bfd416bb631bdd8 *R/subsets.q
3b8b2b2c2d2eceb4a9fe7582c8b6d9f0 *R/summary.multic.q
532158989d1f69d4216b467f6284171b *R/sw2mloci.q
65f5f6dba86b6c1c06ecfc552b2b2e8f *R/t.rank.q
02a994cc179e08d5f704d02eba5dc4e8 *R/zzz.q
3d9c39a2334f18173b0488eeb876e901 *README
8c0eb2ab549063ccc47b1125ce7c8808 *docs/multicTechReport.pdf
e8dfeab60880c1ea8c35532279ec86b2 *examples/calls.q
0835d5641974843f90820d8d4724a500 *examples/solarOutput/pedindex.cde
18bea5957b2d79b9b9b67100de72768c *examples/solarOutput/pedindex.out
f7e1e9b7b371c411a9b43040686e671c *examples/solarOutput/phi2.gz
4d850269602025bbbddf3f19e5146ab4 *examples/solarOutput/simulated.ped
f51dc4bad0e049aa2aaa7f77d906ae87 *examples/solarOutput/simulated.phen
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8667cfd0471470e5fd61dc16c0fc8e90 *examples/solarOutput/solarMibds/mibd.5.1.gz
64565695f0c7c1cc780e4271921c0a57 *examples/solarOutput/solarMibds/mibd.5.2.gz
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877c8706d2166f949620a88508ed8d06 *examples/solarOutput/solarMibds/mibd.5.4.gz
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5fbfa08fca66e086e0d3f7ee9956b8ac *examples/swOutput/c18.map
0f85af2008df270842eaa0a83cd2cd05 *man/addGE.Rd
f9baef7de72dfd999c090ab0472ee4c7 *man/expand.data.Rd
31d062c9f4666994f14e74b9fc8dd3b2 *man/expand.multic.Rd
a103fcd904c5424e2c2ed499143178a9 *man/multic.Rd
a61456df2cca20f8e611b1ddcd52804f *man/multic.control.Rd
290f06bb24f3f697f4a8e5bffcef8f2b *man/multic.object.Rd
77624ef0385fdfa896fafc696fa62bcb *man/non.user.level.objects.Rd
5cf5b49296f04d847f471f738c14aaf3 *man/phi2share.Rd
8cf1224f41104a92ddf1e0158ad89c54 *man/plot.family.lods.Rd
a78ca104018c020fdc59c7256fb80625 *man/plot.multic.Rd
bbef8b3bfa772d2f6239f01c991accb8 *man/print.multic.Rd
67fc3e0bf911abe0b9f06183ef52ddec *man/solar2mloci.Rd
e902cf701d3fc5b7a182d07b09899fe5 *man/solar2multic.Rd
4b025b097479d35a423f945665e8006a *man/subsets.Rd
88640e6491817e52d4268a0320a92aa8 *man/sw2mloci.Rd
1f69a7c94cca160849ab3e4f608071a5 *man/t.rank.Rd
854805f8ed984fd4092d9d139e29f9d2 *src/Calculate.cpp
401f1b685075059e75a78b45de5a946b *src/Calculate.h
c30e16fbc627a043151cb4f48fc01639 *src/Composite.cpp
6a9a6853b411352346bac8be734b2f8e *src/Composite.h
cf70d87abb11f26532dffe5a1620285f *src/Estimator.h
4013e135580c75f5884ca3c847590d2a *src/InitValue_par.cpp
3214c9d3acff813e55f890acde33a57c *src/InitValue_par.h
31216772ffdb492d718f7b9157138bd5 *src/Least.cpp
b86b13291d03045f1be14f48f049dfb1 *src/Least.h
a85364fb7466f8a25cfc3e33b64c13be *src/Lib.cpp
f524b51b0b430aaef3f4c213202d7b97 *src/Lib.h
9f34a3a5cebaa4337b43a06c1b4f3acf *src/Likelihoodfun.cpp
0c93278153a74be3b41344f1e6301fd8 *src/Likelihoodfun.h
6e83070046baffe0959ca2288b76e736 *src/Maxfun.cpp
59637e2565e6449d3f07835f5eb7ea07 *src/Maxfun.h
232594b0dfe68a9f498e907125d40098 *src/Maxfun_add.cpp
90e97ed17385cf1e78c761911835f94a *src/Maxfun_add.h
3c86e946c4eea3bb2937dd487b464a55 *src/Maxfun_fun.h
545acef0445022148a0b3a356cda5b56 *src/Maxfun_source.cpp
923095b2f63d5b64665563269b5a1483 *src/Maxfun_source.h
078a0392a8df1a146ebc874cee644579 *src/Model.cpp
40bc891c37dacb5e17591cb311c17964 *src/Model.h
828f1344deece4e3095cd892cafcb34e *src/ReadFamilyData.cpp
179ec97b724957d62a2001d1fee4e131 *src/ReadFamilyData.h
20d6c747e271e755282c47688ec50971 *src/Robust_Variance.cpp
d95a1c112c095da59981be607c90de60 *src/Robust_Variance.h
e6b502dfda9ff1c9fa6e36b85671c237 *src/ShrinkData.cpp
62171c20d3d4ff999f849f7c617e2e3c *src/ShrinkData.h
705c9767a2d308b6ae9e3b15e2603f24 *src/TraitMarkerCov_par.cpp
cf954ce8df270d0730757b4dc34f070f *src/TraitMarkerCov_par.h
e7fc2812bf6b77b9922a958666fb2039 *src/Vector.cpp
4ee3f9d81eace865584dadfa7f68b952 *src/Vector.h
22b6c5d32f6dea821c69bb873884cf19 *src/calculateCorrelations.cpp
5e162591f85f58f4337b8e1958f4c72d *src/extractLoci.cpp
5270149436fb3ca3b960c85af6988d1a *src/fixibd.cpp
1cd2d459154ad46b8d4c50fe875a073b *src/fullId.cpp
f781c591adb92bfe442978a489c9e4c6 *src/getFamilySizes.cpp
c52987f5c251d14deb9ffccdfa2f370d *src/getResidualPlacement.cpp
ee5bfab77c64e9d61bf5dbb1226128e8 *src/getShareOutOrder.cpp
1752b9569d91c4e0ba15aca568f0f188 *src/isSpouse.cpp
710d75c9603ff3f332dfec4d6002606d *src/loadEffects.cpp
f2725a2d3cbfba95685630ce55ab2935 *src/loadFamilyLogLikelihoods.cpp
b18d4b494383aed67666e16fa6aeb7ca *src/loadInvExpSecDerRandom.cpp
f1a118fccdb70d89592f96d89798ab8d *src/loadVMatrixFile.cpp
1498fb7cacd949ffd8f42e90fa48727f *src/loadVarSandwich.cpp
2ff5cb4fed24af72550ce67782357aa2 *src/loadYBetaDiffFile.cpp
d70bc696a23838674203da79c44efd50 *src/makeBlockIdPair.cpp
2ed08850e07f1e135098478ab59dfaa4 *src/multic.cpp
8d6be4fd01706acae4feb973dd98de8b *src/multic.h
ff831fdeb76fe293b0cff31b65f06696 *src/multicString.cpp
7bfcf1e5bf7a89eecb5ab938b75f5702 *src/multicString.h
2f1e88080997e7b2695292e63c51f163 *src/solar2mloci.cpp
024d212ad988c691b49b8ce03a4ed9a2 *src/splitTempMloci.cpp
9c4e8fac701ad2e0f6d8313546d49b6a *src/sw2mloci.cpp
a3d9a22755b30e29106990286a99b417 *src/validateShareOut.cpp
ff7bdd79930bcb3ea665c1635586c66e *src/verS.h
