adjPval                 Generate FDR adjusted P values for F test
                        result.
arrayview               View the layout of input data
consensus               Build consensus tree out of bootstrap cluster
                        result
createData              Calculate and create a data object for Micro
                        Array experiment
dyeswapfilter           Gene filter for dye-swap experiment
fitmaanova              Fit ANOVA model for Micro Array experiment
fom                     Figure of Merit
geneprofile             Expression plot for selected genes
gridcheck               Plot grid-by-grid data comparison for arrays
macluster               Clustering analysis for Micro Array experiment
makeModel               Make model object for N-dye Micro Array
                        experiment
matest                  Statistical test for Microarray experiment
read.madata             Read Micro Array data from TAB delimited
                        simple text file
resiplot                Residual plot for Micro Array Experiment
riplot                  Ratio intensity plot for 2-dye Micro Array
                        experiment
Rmaanova.version        Display the current version of the package
subset.madata           Subsetting Micro Array data objects
transform.madata        Micro Array experiment data transformation
util                    Utility functions
varplot                 Variance component plot
volcano                 Volcano plot for F test results
write.madata            Write Micro Array data to a TAB delimited
                        simple text file
