e6b306ae2413ba9921b5189c74021e79 *DESCRIPTION
3e68759db3d5875e1d9179f1835093fc *NAMESPACE
7697ac7685aa917a4b942fe0fce71c72 *NEWS.md
ab4744ab930fd592f1f770c35aa38c2b *R/DataSimulation.R
a0c28d847bc08a7ccee2b250b05e7030 *R/EnvironmentalFit.R
a1ce111287b6eced41003d65f48d8f41 *R/EvaluationCriteria.R
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a1f1f932977a28e999ff9c41f96f3761 *R/IrregularSamplingTimes.R
78c986993286bc903e7594361ee70ccb *R/NullModel.R
1374e60a5e272a6f79fa719296ea146b *R/RatesToProbabilities.R
fdd9ac7850d94fd5ef2ac98ebf58af24 *R/RegularSamplingTimes.R
5aa2b8ee8af77c5427fa0ff687a6fbe7 *R/alonso15.R
dc112d9f0755e87c9f3df24741ed667f *R/da_MacKenzie_mle.R
2bc3a2cfe58718ea60a56657c8d93ace *R/da_mle_cedp.R
0c9b46d19e8f6d3104f9cc2a8e2d4435 *R/da_upgma_AIC_cedp.R
1719ef01dd491612def92290c81a544a *R/idaho.R
5d30d483d184aef9df4e6435af21c44c *R/island.R
849bd86918912bb422c245d5169bcef8 *R/lakshadweep.R
ad34e7b0b751a6ccd0ac565bb488039f *R/lakshadweepPLUS.R
0030f7ea71cea0aaeb4df74fe920d41b *R/simberloff.R
daed98d0e016cfd86d41d3013fd27569 *build/partial.rdb
dd9025cb896377506d97785bf9f5c567 *build/vignette.rds
8b729c72322c972f605903b8e6a93e63 *cleanup
0ffbafabd44407536a9ef22eb953a605 *configure
39fc01c0fae730d7847aa93d7f471380 *configure.ac
1cd1e6c50f8e6201c7bf0f92f6b3c334 *data/alonso15.RData
f8f8802df20456e3f7d619158d99d9a2 *data/idaho.RData
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5fc1a2bcedccb46b625c8b86e9321161 *inst/CITATION
6f84dc94fcf2b45322765e1a9d13e75f *inst/doc/IBDmodels.R
0665cf0f32d97b516a9057ab0e811753 *inst/doc/IBDmodels.Rmd
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eeea0df4770da0126729ff4668c59712 *man/all_environmental_fit.Rd
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375d9a37ff6a54efe35c6aabd9d40a19 *man/idaho.Rd
8fc3de82b930848f5038f6a028331dcb *man/irregular_multiple_datasets.Rd
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890f53887491ed85ec3f051d8455c4c4 *man/island.Rd
69a5a1f0c9eba6f44458148ae15dcac2 *man/lakshadweep.Rd
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8bd8d9dc8205d60f5244aef19ab1a3fa *man/mss_cedp.Rd
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3bb2814c33846231db310f238aabcb04 *man/sss_cedp.Rd
8b4819ca603a913d09a24f26daba9ea6 *man/upgma_model_selection.Rd
d71e7bb2dfa69963aee9552d78a554c5 *man/weight_of_evidence.Rd
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f6b9704bcec0faca5bca3aaf8f78786e *src/Counting_Replicates_per_Time.c
691945af594340ff3ac34cc6eb1da27d *src/Counting_Type_of_Transitions.c
2e1fdb2f95551e583c2bcdba6dddb793 *src/Create_Binary_Combination.c
97a7e80aab77a396c89ef4d3648ceb72 *src/EUCLIDIAN_DISTANCE_MATRIX.c
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4ad42962b1adaa92f2c3f1810927b50f *src/GSL_MacKenzie_NLLikelihood_Function.c
5130965f6176d75033e5840831d3ddf3 *src/GSL_Minimization_Simplex.c
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7190c3e01197c97623ad4f36c74b1cf8 *src/MacKenzie_NLLikelihood_Function.c
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56c891b11c74066a218bb635dfca234c *src/R_SHLIB___mle_MacKenzie_NLLikelihood_Minimization.c
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4c400a03731cb5492f7499cf66ded05c *src/Rates_into_Probabilities.c
6012e4fb88ac0bc2f5ec5b8bc295d062 *src/SP_Matrix_Data.c
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16c9be416966d154e779d03abe5f55cb *tests/testthat/g2.rds
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73fba360b695ba032772c91fa88457a2 *tests/testthat/g4.rds
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0665cf0f32d97b516a9057ab0e811753 *vignettes/IBDmodels.Rmd
17c56e8ee2be559025f168bf2e7a9af9 *vignettes/detectability.Rmd
b5ff98ba6c5cb1111c869fd4e869a96b *vignettes/island.Rmd
