ba74c46cd43e8a1e776d01102ec6922b *DESCRIPTION
2603458c2b83f8e0b35eb5e2edcc8be6 *NAMESPACE
435013b85a95948826b34c78022f300a *R/aio.R
ef0ae4606e3b7407d2df46de54ac24cf *R/bmh.R
7ec7593f13298ae5ba000e1e68a23e71 *R/co.R
627b4b95db04694bbe664bf7b474bc28 *R/cs.R
fd684985478b50594c421d224058cea1 *R/fastDist.R
69863a78058a87d0d1517aca23fbb73e *R/hh.R
85f48e6e07caf3f6524ef8120874cabe *R/hsphase.R
a351e1822bc33cf5130177983b3c3e41 *R/hss.R
b2456c0ebf8f3114ede17c0f2de7f501 *R/imageplot.R
d7d650a21c0e1e7f67baf0d61465719d *R/impute.R
d6063de9c81ae9eaa63df012c6cb9c0f *R/maf.R
ec6ccf9a5bd364378c91cfae1b5817c7 *R/namingInferedPedigree.R
e8c1283a4be7fe5d085d01f56f19a978 *R/ohd.R
f5d5e7d4811bf929cbae33c67b3243b3 *R/ohg.R
83c62fdf863d7d58244e8b68da624c09 *R/ohplot.R
b858163290c54cc7faa92c61ddf59913 *R/para.R
1e5dded4ff25d7034f3ce9bf702b203c *R/pogc.R
4f697106a889a8f2e5b0ab3fe3544cf8 *R/prCalus.R
2f51ab782d6ba735901283ff2d5b9e89 *R/prManual.R
d8cc51b192ed3ddfb8e765f35dc185cf *R/prSimple.R
28fc6901f94d4d27347b5ea2e83f8bc4 *R/rplot.R
7a40a40c553e00b498b501ee93dd625e *R/rpoh.R
2d8d916ff425e5a308fcb50de6ecb186 *R/rpohhsphase.R
c1c7b2d3da1a61a0a201ea31bafecbd7 *R/simulateHalfsib.R
b793c4a1e8ef57b8f2fddc9ce1829b1d *R/ssp.R
3a90bdeda4ac0cd763b0b054f2d3c07c *build/vignette.rds
168c3c8ce11ecb4ca196ac0978a4953c *data/genotypes.rda
dcfad65640df58767f04322d094f6a84 *data/map.txt.gz
6e2adec868a9c37f3b6d2ae26be8ca73 *data/pedigree.txt.gz
7760e822405e2eded1be3d91e2595490 *demo/00Index
19b72c690e50b30af50a3decd4c93575 *demo/hsphase.R
126db1f2240d1c14cc3b55cd26a00bbe *inst/CITATION
bbb1c5781055f42319dfe68d85b99e48 *inst/doc/hsphase.R
b896622ffcb3a746ebdb122a6184ab23 *inst/doc/hsphase.Rnw
de884d0d02778ea79c974990676d9827 *inst/doc/hsphase.pdf
6ab99072aa863b653e29315b81d690d3 *man/aio.Rd
ba4eb55ea0dd80fcc215a02c7d4b38ba *man/bmh.Rd
422bee2d680123ea3bfe71f3117b6ff5 *man/co.Rd
3845b3ff28188b387d1c036ccd219e62 *man/cs.Rd
921589987cfbe874ead8ac8e1cabf76d *man/genotypes.Rd
6462991909c979989607434d64e4ff2b *man/hbp.Rd
1d3fea51b1544ffd1924eb47eddad5db *man/hh.Rd
39397b3f631a00668493659fc6473e11 *man/hsphase-package.Rd
eb62b9c12df019bfde392acda7a1033c *man/hss.Rd
9d33f11fe6a3bbabc93c8a8723b1501f *man/imageplot.Rd
6c14d7955a2616ecf4cecd6d9987785a *man/impute.Rd
59209c222d33c9bc743c949b5e13fa2b *man/map.Rd
39dd407532debdaff7ae462bac6574b2 *man/ohd.Rd
19f5d205c8673be5c671ac391aae01af *man/ohg.Rd
cfba8f09a5c96291facdb60759ec4bdc *man/ohplot.Rd
0bdd0d8fa0e3916e968f7f83137b2f78 *man/para.Rd
fb1ed6acca0b790da654fff176475e6b *man/pedigree.Rd
bf818b2c0b8aba0f9df4b3b9472e38cb *man/pedigreeNaming.Rd
95364db12b80a05fcd03cc108fd01b44 *man/phf.Rd
630743975a75972aca2889cb1e011cfd *man/pm.Rd
f69227865c2b949c61ec1751ea7cb105 *man/pogc.Rd
b8c4dc05fe01d41b2e9261deb8eab3da *man/readGenotype.Rd
c358934ba46de5223d615d67cbcb831b *man/recombinations.Rd
a3a4922c90193dba6ca942da9d22e0c2 *man/rplot.Rd
a2c14fc1623bfe6bd95d63facb95f7c3 *man/rpoh.Rd
3fa5ed9525f043f609666f131d3f46b6 *man/ssp.Rd
355d4623f31d93bdbe50e73287deb0ca *src/FastDist.cpp
972fc1ae3e72385d53cff89ce523d13a *src/FastDist.h
5cd5b87e700bd1b32581b47ba6f8ac89 *src/MAF.cpp
04b95db8f2e583f56ba24d27e86e6592 *src/MAF.h
dab28ebafcd31b7dd004cd1ac6efe0f6 *src/Makevars
29dd356b4dee1a598a077b2d5f74614e *src/Makevars.win
0278845eeddb211838c55d6ccaaf7e74 *src/Ohd.cpp
881d0046b08df14d116addd421e40d2f *src/Ohd.h
69d6dba04e4abb81254404a5ab512314 *src/TypeConversion.cpp
bb38f4435b5d2afb7786bae924605274 *src/TypeConversion.h
cd1933a1f780ccea029ee9378eedc1e3 *src/block.cpp
bd28b0b215908f71023d3cfe0349744b *src/block.h
48cd036dda9c91650bbb2544efdcf373 *src/block4Phase.cpp
7e71247264b7a185277be5b57add3453 *src/block4Phase.h
64d659e833a41f93320228ddcd2e53e8 *src/co.cpp
1ca6285d72c61f8948e4f9b3146432ac *src/co.h
b9648ca5741232b1aa75790238f6b635 *src/diag.cpp
316b08678c3e6d0b9b35cb49a3ae33f6 *src/diag.h
bc5ad49076b67cf4445a27db7301f3bc *src/hsp.cpp
c023c83c30093db229a80bfea7964d5b *src/hsp.h
5182bd0c98ca4de91336341f8c331a08 *src/main.cpp
34286674b5a5b8f68a8226efaf96a886 *src/memory.cpp
9520729b3baecb7534b52197cef1cf16 *src/memory.h
603a25179cbc1521cce61c64ac17507d *src/oh.cpp
b8e6ba123ef98acc3ed2e72b2cb501c4 *src/oh.h
7b36a34b5eacda7b93f22f952f0df952 *src/swDetect.cpp
6f3f953de1a651d31835e962cf5985fe *src/swDetect.h
e259b52e5fb8eba0d5a475c9e2096422 *vignettes/hsphase.Rnw
