f524a3d46973768f71fae500fac8b6ac *DESCRIPTION
c6b65c657209d8847c298a8ee715d471 *NAMESPACE
a91376317d7f7470dfe6ca56f16a6d98 *R/RcppExports.R
e0d55229330dcb9765dae2c6ce4d061a *R/computeGPHMM.R
2eee290c6cc25340c6de583e20274f44 *R/generateData.R
f4cfb95b2972e8d57f8cc3580d8fec38 *R/trainGPHMM.R
3c4549f2f40fb21dc8825275f7be0098 *README.md
2403e39726072ee5ae04e8b102bdb4dc *build/vignette.rds
b8a56d1b51fa22193676414971924160 *inst/doc/gphmm.R
7de5b258e9ccd2ff5b25bb6cae293526 *inst/doc/gphmm.Rmd
7dd20d964f9e68c9f7037cb8d22ad97e *inst/doc/gphmm.html
daa156c8c3b478676363cfcd134275cc *inst/gphmm
e4d1134f4e066c128a578ef293c6ffca *man/calculategphmm.Rd
ae767451369fbb5e3bcf5d57beab86b1 *man/computeCounts.Rd
c0e619b98dedf462765984dcf903083b *man/computeGphmmParam.Rd
fa70f0ca88947305e7a5f0026a1da5eb *man/computegphmm.Rd
7f43cdc2073728210155077ecec8dd36 *man/generateRandomSequences.Rd
c7e82fafad390d0ea9c245f92e593a3f *man/generateRead.Rd
e2151dbe6b722206f3daa76f1d9aa556 *man/initializeGphmm.Rd
7fd80ba97d82acbfa808af0980579336 *man/makeGphmmPerRead.Rd
373be1802f8ef7d9854280ededccbe88 *src/RcppExports.cpp
a2e5da90ac014ae0e5259f230f70233f *src/calculategphmm.cpp
9f551502e9cce81de699368165becece *tests/testthat.R
75bfa8bc2e1cc99a3bb1caaec63e4f57 *tests/testthat/test_computegphmm.R
eb9e1698de416d05edcd8f8e8ce32852 *tests/testthat/test_generateRandomSequences.R
6e8c979317349f2577ab3f9c84ca7535 *tests/testthat/test_initializeGphmm.R
7de5b258e9ccd2ff5b25bb6cae293526 *vignettes/gphmm.Rmd
