125c98ebb4eeaeecec19fa947677cd7c *DESCRIPTION
a0bc84d25feb4070623f8597c4ee771c *NAMESPACE
071954a56a63f655de7d743dd9cb1e5d *R/addColumn.R
dfece862ffbf478b3be1714bfb4b97f7 *R/assignMutations.R
698ffd9afa389a8e73f98d5536e5fd83 *R/assignQuantityToMutation.R
0fa8f9586ff866a063de7fa8354bdbc1 *R/assignQuantityToSP.R
9fe917d487051d4b37eee7cb269bb183 *R/buildMultiSamplePhylo.R
6ae0d8dc72ec6a8a8bcbbb28a4a1f894 *R/buildPhylo.R
0bd653b00fa1c5f97c64721c9a11dfe0 *R/cellfrequency_pdf.R
79efc62e017a4350a9d520bebca38219 *R/clusterCellFrequencies.R
21b02bd691051ea17730317bb6d06850 *R/computeCellFrequencyDistributions.R
f7bf2d6192a657f1850cca805ddf220b *R/onLoad.R
5d849bf7d592c617a3d44c3326d2a248 *R/plotSPs.R
ee36430ed966f1bc4485d54866e47284 *R/runExPANdS.R
ab9b341bfd4c3b08d33af8c497bc1261 *R/sysdata.rda
82132b0f9ff691dac132fbfff1766f49 *build/vignette.rds
664284e0624f9ce0762af69e78b0b03e *data/cbs.rda
6fb02c3ab0905057bf173dd43c1b8908 *data/snv.rda
cead9f2d19c07d79160b8b5d08eb950a *inst/doc/expands.R
0340e578115dc4a104fa4891ef05c546 *inst/doc/expands.Rnw
9f218e9b3c8e71c77c0deb6f898d1d67 *inst/doc/expands.pdf
1238fbafc33ab78a880d04a3f478c758 *inst/java/expands.jar
1238fbafc33ab78a880d04a3f478c758 *java/expands.jar
e184c78ff91f19bdbbd468b8512eb872 *man/assignMutations.Rd
dc0a8a7a0aee2f71baf3ea7e5c574e1e *man/assignQuantityToMutation.Rd
d95298d1bd92cb777c71c5883fff0ca2 *man/assignQuantityToSP.Rd
d194cd18cbed41cb6937cb3d339ea13c *man/buildMultiSamplePhylo.Rd
6f50e6fc92498297ad3f171230c7d6ba *man/buildPhylo.Rd
182bfe9986fe62d975e0cdc4a8baf5f6 *man/cbs.Rd
69736ae2cc5b940996d0a91c21ffc91a *man/cellfrequency_pdf.Rd
4b5b692fb9aaa1622b74d5c536855812 *man/clusterCellFrequencies.Rd
ae9b22141a92069c3598ae4740e1fc8f *man/computeCellFrequencyDistributions.Rd
65354d2ff29204ffe4f930f3eabcdeff *man/plotSPs.Rd
a2f8272a907692ff63f0256207acad06 *man/roi.Rd
66a6dc408a8695e6cd9508ede9251265 *man/runExPANdS.Rd
31e52065878423e41bbd7827e4c7ef09 *man/snv.Rd
b80785aaa809120eec20fe84f239736d *vignettes/ID_MRD_001_metKidney.cbs
6837b968c578621f982664b6f48beaef *vignettes/ID_MRD_001_metKidney.sps
c433273ed3b6acae84450a565dc14fea *vignettes/ID_MRD_001_metLung.cbs
ee846819b79f1f64b57031d7c0d5c2bb *vignettes/ID_MRD_001_metLung.sps
8e23abaf58395fc8cfcec977ab9d5c6f *vignettes/ID_MRD_001_primPancreas.cbs
503326f1ccccfadb8c22fb1436e8daac *vignettes/ID_MRD_001_primPancreas.sps
0340e578115dc4a104fa4891ef05c546 *vignettes/expands.Rnw
291e185f5056595af2f5aa27576d8887 *vignettes/expands.bib
