bcfa6cc44e9acea85b6b3d2ccf8d9f8a *DESCRIPTION
9f665c40fc44c65586e9c458f7201d4a *NAMESPACE
51519d5c25b8682fdfd991d9cc980e81 *NEWS.md
f7905a533c1b8328ae00c37c37acc76e *R/biomart.R
8fbb545744304c645ea6cdda43e97fcb *R/connected.to.internet.R
1fa51176110b5d0803c12f0c3e784325 *R/download_database.R
ff41b4cbf0596958cb0db7311ee18aa2 *R/download_database_all.R
faf2fe794d011df336d74dceaa274075 *R/get.ensembl.info.R
19240872a929429c29e6d77a468cbbf3 *R/get.ensemblgenome.info.R
c41551692f7d7295b70a1f83371be211 *R/getAttributes.R
6bac7621c1aa5e245bf3573bd7a5442f *R/getCDS.R
7a63894814b70c2d48f26c3929524082 *R/getDatasets.R
2a314d17d9d6adedaa0d8bc002c8a902 *R/getENSEMBL.Annotation.R
28867d82a163152e88470bc4a55ebb0f *R/getENSEMBL.Seq.R
1552f80f0244ee1c1eb79b0c00bc168a *R/getENSEMBLGENOMES.Annotation.R
e388eb5ae91897d05c2cfd47daa1a075 *R/getENSEMBLGENOMES.Seq.R
1615b2ff9ecbbcd43e39b71f29e52186 *R/getFilters.R
66a31078b97e75fedde8465ee5b0578b *R/getGENOMEREPORT.R
6dfbb91262716b7567635d204e96c71e *R/getGFF.R
6476c42e4dd58d4fefb5dad3866e6e9c *R/getGO.R
4d88e36290eeb367ad1c16bc3ea98178 *R/getGenome.R
8892f4465e94e72eec6ebae870654d20 *R/getGroups.R
3f7a3a58cba59e8ae36344bf493c468e *R/getKingdomAssemblySummary.R
109f48b17627db5efaf09debcab0fecf *R/getKingdoms.R
9d65a56af7fadc16816edc3517503864 *R/getMarts.R
08d77cbc74c04e82ec0d966c023a2c21 *R/getMetaGenomeAnnotations.R
1d8178ed335b05151443749e03206f84 *R/getMetaGenomeSummary.R
148e3505f349def4a3dd79bae1d5eda3 *R/getMetaGenomes.R
644c86462cb9f872564948c6372c1bae *R/getProteome.R
6f95caee96edbb13e9076b386ec5ceba *R/getSubgroups.R
ced8dccc5d7debf169078a2d0f2d3667 *R/getSummaryFile.R
4db36251023eaf10cfbbfdf5216db939 *R/is.ensembl.alive.R
99342c38794a050b8839fec422f14006 *R/is.ensemblgenomes.alive.R
600a88c29b5d4bc4f4682238a2775957 *R/is.genome.available.R
352fbe47ac109704eb519da86bffc3a8 *R/listDatabases.R
aafdc1f64ac0d4ce20499801ef22f45a *R/listGenomes.R
a121cdb572c5f82c2f03d8ea26c54077 *R/listGroups.R
047864df884f8cad4ccc98d77c8bfe97 *R/listKingdoms.R
6f6c3d09fdd774fd950e9d111c2420bc *R/listMetaGenomes.R
90414d6fa7d9d018a5f491ecfa9e966f *R/listSubgroups.R
7f7a64fd92df3ce1333becdd9cb85386 *R/meta.retrieval.R
e17ffab4b70bee3ca1d99e1692129c55 *R/meta.retrieval.all.R
ef742d880b160878611c989b410bf962 *R/organismAttributes.R
688c935d015f583b6c33a1d2fb20daa5 *R/organismBM.R
664c0253fee727f0404a232b3d77afef *R/organismFilters.R
ead1fbc1c9f453a9059b3101eac2838e *R/read_cds.R
948fb1a24384dc796a2091f332268274 *R/read_genome.R
7379624b3e2c2c67f6a9483f086b5b4b *R/read_gff.R
0d52c3bbcb188d443db604041198fd50 *R/read_proteome.R
6c10de20139ae81f4597242188a5a6a6 *R/refseqOrganisms.R
41bbb4627cd7a78120f5498c64fd249a *R/utils.R
f886a9f51ce032b2e39cbc4ce8781c6a *README.md
b12a362b0050ab494902da1db7d3c616 *build/vignette.rds
816eb00dc5f75050c208dc02d84b8158 *inst/doc/Database_Retrieval.R
74fd46ee12a46d36070c58f3a3d10d12 *inst/doc/Database_Retrieval.Rmd
378fb0f8e875f57b6997a954a0ae93e7 *inst/doc/Database_Retrieval.html
b411369f23864fa7655c4ecad7eae889 *inst/doc/Evolutionary_Transcriptomics.R
cc8168244a559b80c34a04d290db67da *inst/doc/Evolutionary_Transcriptomics.Rmd
b74517b2631f2b9b998b1cbf8c952a7a *inst/doc/Evolutionary_Transcriptomics.html
cf5e15a5651791baf03ac8205d974635 *inst/doc/Functional_Annotation.R
8d3c1737ed81453b4006edfd6f995309 *inst/doc/Functional_Annotation.Rmd
879270c1d6899fa70f415e77a1685f33 *inst/doc/Functional_Annotation.html
816eb00dc5f75050c208dc02d84b8158 *inst/doc/Introduction.R
73637b441b76255574d4eb50d206fa54 *inst/doc/Introduction.Rmd
a57db9142fe76e1f13c44bb9fc62b8c1 *inst/doc/Introduction.html
6cebadb929899773d50a63e51adf8eb0 *inst/doc/MetaGenome_Retrieval.R
cbcabc6c179457e9bbc61ad9e559aed2 *inst/doc/MetaGenome_Retrieval.Rmd
30df617af6baf5f7d9b753b88280d804 *inst/doc/MetaGenome_Retrieval.html
b83b8cb564945e268a4088f633a58b9f *inst/doc/Sequence_Retrieval.R
f3dbb5b06803f889f766620fd1f349dd *inst/doc/Sequence_Retrieval.Rmd
3bb5b26ee523f52c446f1e35c91c94fa *inst/doc/Sequence_Retrieval.html
7ce8ee9996eb600b32e6fb09d1a6a7f9 *inst/seqs/ortho_lyra_aa.fasta
296a0b7d6bcd6f92fd5dc62f07645cd8 *inst/seqs/ortho_lyra_cds.fasta
5cba7f2586973232a8ced4172f1370ee *inst/seqs/ortho_thal_aa.fasta
7f075e38a3d0d70df1de9a12addfeaa8 *man/biomart.Rd
1b912c28c3b17f32238a3f7da293a1e2 *man/download.database.Rd
bf0e2bd8078eb3a6e93f934f34207f53 *man/download.database.all.Rd
ae12a087b1afbe256b0ff930c622fa43 *man/getAttributes.Rd
16f3673e497d6bc1075acf4c62ba0a9c *man/getCDS.Rd
62b79bf1205cc7bb76bcf78a65b53431 *man/getDatasets.Rd
57b5ac9de95bee4ffbde929ba36e46c7 *man/getFilters.Rd
0933c16318ce32ac10c26d03439d138b *man/getGFF.Rd
3b4066d3a5ff936c9b6ad5293f202455 *man/getGO.Rd
edd74f88da1bb5aa25a2b1ba0d44ab19 *man/getGenome.Rd
b75c66cd0dc903d47e4c35914b30a713 *man/getGroups.Rd
f7d764170f032d095d6bfacf99675a81 *man/getKingdomAssemblySummary.Rd
78019f24c7e15f1d7b2308e3099d1a07 *man/getKingdoms.Rd
c556d75af354337840fa24d456a67702 *man/getMarts.Rd
e0a8242980c91c8f956747ec59adfa07 *man/getMetaGenomeAnnotations.Rd
77d367cea8e14dd12c6320f5c5528ba1 *man/getMetaGenomeSummary.Rd
4d84d42256dcc6be6fd09b35d4f1872f *man/getMetaGenomes.Rd
91d16698cb4c42e23f0b49cb897471db *man/getProteome.Rd
912e473c98f53b20d74136229a20db9b *man/getSubgroups.Rd
10cbf6c18336a426f93d4fa22d724a34 *man/getSummaryFile.Rd
84fff8acce7e95783b863c7d7c594103 *man/is.genome.available.Rd
6ed919c25694b7ec431586f755ee9a6c *man/listDatabases.Rd
6b5457e3023d7b7f3a5db5a2bdfbceca *man/listGenomes.Rd
5453c8c61774549d0c05f49efd0c89de *man/listGroups.Rd
82efbb3206948c9ba057166e09fc3c52 *man/listKingdoms.Rd
d18d2ac4e9a648e75248a15e10451314 *man/listMetaGenomes.Rd
79bf7293b1bbc8f2727bc421018d26a8 *man/listSubgroups.Rd
76cad8b5b88696700f5803a274eda76a *man/meta.retrieval.Rd
69fc7938689b2201616699d7d3eab8cb *man/meta.retrieval.all.Rd
1c37292d7c13286c2ae1f9ff09c41ee1 *man/organismAttributes.Rd
d2fb5983079ab9b78d5591672054075a *man/organismBM.Rd
c127ba07c88caf47db84f17d2353b8cc *man/organismFilters.Rd
35d04e9871c1bf1faffe7161f404863e *man/read_cds.Rd
ae905bd7c2ef9b86ce3d71cb5caf5674 *man/read_genome.Rd
80fc8e8adf5fdcbbb735d28a3fc84b33 *man/read_gff.Rd
11a8fd7742e72f905451597b0140a902 *man/read_proteome.Rd
de444901a8c5702b78728c85d0892a07 *man/refseqOrganisms.Rd
52ab185a98572381b80363f4bb29fe72 *tests/testthat.R
d2a06d4e7fda328896f68dca3ff52176 *tests/testthat/test-biomart.R
54fa22eca6943c2f94a6e3420c8a7d7c *tests/testthat/test-download.database.R
d4d89bd6b24b875747136c34597e6a89 *tests/testthat/test-getAttributes.R
b65f83cfd6d027334f53a89a804dbf24 *tests/testthat/test-getCDS.R
a662608cd7a5c7e742e9f30acbd9c0fb *tests/testthat/test-getDatasets.R
38c3b5bfd3c6a85647c4db840a9dc5d3 *tests/testthat/test-getFilters.R
4f836df7e056790d0aa267635aeb5468 *tests/testthat/test-getGFF.R
980cf431271755adaf442955d8d8dade *tests/testthat/test-getGO.R
3db762804a6d9970632aaa1d039e70e7 *tests/testthat/test-getGenome.R
75cfc12ce07496639b4ce9ad1e117c03 *tests/testthat/test-getMarts.R
51396bf601f2f0156f9dedbeab6ad9de *tests/testthat/test-getProteome.R
2ec0c78243c1f964b8e01ce3fa0dbfc2 *tests/testthat/test-is.genome.available.R
9e219279813a236690015c268861be3b *tests/testthat/test-organismAttributes.R
c52e751e6ca66e8f55cde1d139dc89cc *tests/testthat/test-organismBM.R
c705973227338216effdd012fdd31e3f *tests/testthat/test-organismFilters.R
74fd46ee12a46d36070c58f3a3d10d12 *vignettes/Database_Retrieval.Rmd
cc8168244a559b80c34a04d290db67da *vignettes/Evolutionary_Transcriptomics.Rmd
8d3c1737ed81453b4006edfd6f995309 *vignettes/Functional_Annotation.Rmd
73637b441b76255574d4eb50d206fa54 *vignettes/Introduction.Rmd
cbcabc6c179457e9bbc61ad9e559aed2 *vignettes/MetaGenome_Retrieval.Rmd
f3dbb5b06803f889f766620fd1f349dd *vignettes/Sequence_Retrieval.Rmd
