05c9fe6bfdb38aa2f1f3b4c9719cd708 *DESCRIPTION
4cc1ab47c2482e6438aa982983ffafa1 *NAMESPACE
0d03dbab09aaf0937955d39f77a0ea99 *R/MAX3.R
b2941a75e1d3d7f100ec21d2c620eeb5 *R/PRS.R
c3333698837edde24f8ba49536b961d5 *R/RcppExports.R
547edfeab5f7eb770d5d0942adbf2119 *R/apply-parallelize.R
39b06dc90a9004344db1105b82e411f2 *R/autoSVD.R
5a70098045f096e1336126f3714c3441 *R/bigSNP-class.R
fb71fa0b8b82d029423168e52a38d748 *R/bigsnpr.R
7675996ad3201a2b95e60b1a8682af52 *R/binom-scaling.R
e50adc270df9a45f4905c17fc8beb4d9 *R/corr.R
a6ea390185435234fd9f283d5e0fe2d1 *R/external-software.R
0b81cf99e65eeb6795413d61d11691a9 *R/fake.R
d0bb0b059aa6e42c86037a306f59e403 *R/get-save-infos.R
286192c6118d7bb4375e90e85752db76 *R/impute.R
b48aa6f08cd9da4461987640fe0e8977 *R/man-qq-gc.R
a9641c388b6a740cfcc9882ecfc4fbad *R/pcadapt.R
fdbe1813d38b13f7f61b3a8f692c1e8b *R/pruning.R
cc9ac3e445a3774dc259e5cd6cef7044 *R/readplink.R
2207f0abc9c50eb59b9d027d3d6aa9c6 *R/subset-QC.R
d76584a348dc66fa72c27e63704578f6 *R/utils-assert.R
e01443f96d4a233c026894f37b7a5049 *R/utils.R
88aea1603b413c3cfbb70d9cefb62676 *R/writeplink.R
a0879b3e52a8905fb0c5e46cd5d7cc90 *R/zzz.R
b56bae7bb06ba628a702a97ae5960ead *README.md
b6a17477d45da8d606bd64c09c0b2932 *data/LD.wiki34.rda
97096ebad1b9c1c681dbe07946e60c7c *inst/CITATION
73ee1542698b828eaa2e96e3668037e2 *inst/WORDLIST
5cdf5da8fd1fc9e6593dd582e2a66430 *inst/extdata/cluster1
75aa2415b3d4d90646e7ab62cac04183 *inst/extdata/cluster2
b755fb8b6e309a766908dc94302446c9 *inst/extdata/cluster3
7960ea9d91206f4943b62064d8e3cd99 *inst/extdata/example.bed
5865c5beb293af9e15ba050c98c907a3 *inst/extdata/example.bim
9e49838c4ef9572475057ec487f2475e *inst/extdata/example.fam
c3abb021ce8c7679518c4eda63435c08 *inst/extdata/example.genome
734c5a432191c17a8a0f6a165d7f5fa7 *inst/extdata/example.log
cc1edf3cac375fbc48e3a1d59bb84561 *inst/extdata/example.nosex
3a9fb2906a074338f6b40d185dd4cb43 *inst/testdata/clumping.rds
229ce928a2dcd8df1efa68dd5c9c4b60 *inst/testdata/example.ld
f205e0168f49ded5dc0189515695ad54 *inst/testdata/pruning_ct.prune.in
f49282ad3af26f3d4f016361c2a22d48 *inst/testdata/pruning_kb.prune.in
2da201de303fc52ed72a9540c9baf68a *inst/testdata/pval.rds
9e029cb629e96ec9f36dd127b45eb110 *inst/testdata/scores-PRS.rds
377801e9b9a5cba6349d6ed505b71f22 *man/LD.wiki34.Rd
6aaac2216da203d80884e3e7b64224c1 *man/bigSNP-class.Rd
bbf574b2b14827fc0cb0ce0c8fc32331 *man/bigsnpr-package.Rd
89fed8edd160870e78ca493503046e67 *man/download_beagle.Rd
96fe3d1f19b13db814ad011134c80051 *man/download_plink.Rd
afd062ea2edb48eef2078a00995991a8 *man/pruning-clumping.Rd
24a00c53b50bce868d1626c173cad6ff *man/snp_MAF.Rd
a865dd674ed8bfcd2220fb8eefa84d86 *man/snp_MAX3.Rd
9c1c98aa6e23f36809acd6e8874b58fd *man/snp_PRS.Rd
1205c47569999f3c8a084844ca1cef66 *man/snp_attach.Rd
8134b46232e42fae6efd8b76b185c1a4 *man/snp_attachExtdata.Rd
e8fa8e7508df06ae47cc16bf8f842ab1 *man/snp_autoSVD.Rd
641ab145a06fe266d26467b45e020419 *man/snp_beagleImpute.Rd
fb99e51010b7b1c39455a86f071da489 *man/snp_cor.Rd
72c783078eb0f88278725af8f8bd5935 *man/snp_fake.Rd
a86dcde9097d6c6a31519431ad1b85fa *man/snp_fastImpute.Rd
77dc6747d5d925af8ca15e682f8dece1 *man/snp_gc.Rd
d4fd7abc276a4b6e4473b03caf742f1d *man/snp_getSampleInfos.Rd
085d7eef515477793b19a355d73877a8 *man/snp_manhattan.Rd
18ba2d344bc9da7a14767fc7f1375d3e *man/snp_pcadapt.Rd
5d05fc67a89160aae9f62b06d6fc1319 *man/snp_plinkIBDQC.Rd
8af9235156e96855f1237fc68b3bcbfd *man/snp_plinkQC.Rd
64ef953c16cb1d3d702b517f74047813 *man/snp_plinkRmSamples.Rd
e53391439d2f1463d30dfd763fdb017d *man/snp_qq.Rd
ece46f34d89a8563802a386bbaad1297 *man/snp_readBed.Rd
ce12c3b9f8dd7c686d90ee75a67068a4 *man/snp_save.Rd
c009e58a67f20a0073b6d7dc63bfce50 *man/snp_scaleBinom.Rd
e9b452b70619f0d433ca1ada483f6ba4 *man/snp_split.Rd
efff15d541adbba18aba704d7054288b *man/snp_writeBed.Rd
09ee3942cc33bfd09e212ae50717cd21 *man/subset.bigSNP.Rd
3e42fe43541cf937e1f4ba495fc7a4a3 *src/Makevars
3e42fe43541cf937e1f4ba495fc7a4a3 *src/Makevars.win
29d3abbc7660cf5f627df3bf456f0795 *src/RcppExports.cpp
ef485b64da49a15b9f2e2b1dc16cff26 *src/copy-subset.cpp
cacc1d2000d31425cdd2a2b6d5a10076 *src/corr.cpp
49b3a69a8351a88b5b3fa8db7b340fb6 *src/pcadapt.cpp
a0787ec5bb2bee4baf69e3eaaad37678 *src/pruning.cpp
9970028f4bd2283e131398678380e85c *src/readplink.cpp
41da65345c5b3b5e13dae2f528eb407f *src/rollmean.cpp
f87b6bae079631598f75bc635919f432 *tests/spelling.R
3e0a5e1e34be94f9eeed8fb6fa53edde *tests/testthat.R
5073a0a122bb00199f86eb4375e5b590 *tests/testthat/test-MAX3.R
244b0c1a237d8cbc6b2f71a0ed1569f8 *tests/testthat/test-PRS.R
f74dcb86568bd8f9fb6c65a183bb6fba *tests/testthat/test-attach.R
5a99919f1e9b079560db29e4d02383fc *tests/testthat/test-corr.R
6368dda776a91d28bc19062419023e06 *tests/testthat/test-fake.R
aff304f324a657188652c0c7dd1f8cc9 *tests/testthat/test-fastImpute.R
8e2634a027b53ec3ab6cf167fe9010ff *tests/testthat/test-get-save-infos.R
b6ca71de3f674f72f5d0ab93093a4a52 *tests/testthat/test-parallel.R
f60aa5bae4fb7dac89c57ddb33d792f1 *tests/testthat/test-pcadapt.R
7af4254a43b19a2086103ef89f8ca5f7 *tests/testthat/test-plink-QC.R
d8c10808456ab1f3c56323fd84f13a46 *tests/testthat/test-pruning.R
e7cbaebb791804f089edbc1f9b8f0306 *tests/testthat/test-readBed.R
9173345de61082216f6794feaf0da8b3 *tests/testthat/test-subset.R
c42798fc1242fb90814180ef34e98ff4 *tests/testthat/test-writeBed.R
