826ce844d477e0c82b532e2c8dc484ae *DESCRIPTION
e7966c35feeee27923d1084161f0a4e9 *NAMESPACE
086765a73351b67635ad3ad3c0137a3d *R/aaDistribution.R
02591f6920fa502319662212c9bf137a *R/clones.CDR3Length.R
726eff5cdc610c13b182cc82fcfc5798 *R/clones.R
3cb2e1ccf626656319c7324ea5383e3f *R/clones.filterFunctionality.R
ce1fb501f22c5824856d79bcf81e2763 *R/clones.filterJunctionFrame.R
8bae874e114631db769db19b55c5dd4b *R/clones.filterSize.R
5bf31375c57e823abffa52cd3794df88 *R/clones.giniIndex.R
40e71c2c1db3b334c2d8708fabab70d4 *R/clones.shared.R
794c4cb0a9ed7038af3b04458a7b7db6 *R/clones.shared.summary.R
8f80b573fdacf334060f7267a9003e3d *R/combineIMGT.R
c0b6c2f67471d739a37697f4f5e884ca *R/compare.aaDistribution.R
02731feb98878fe009990fc1d6d54d9d *R/compare.geneUsage.R
f39abfda6bae838b585b821690e1cab9 *R/compare.trueDiversity.R
7bcf88dab99161f4ddba95100df32403 *R/dist.PCoA.R
706c8a8091384067924b33839e4321e9 *R/geneUsage.R
31b1e64308501ee2dfa4ab003f906871 *R/geneUsage.distance.R
bde64f8a84088e5e540e2a8202ce325d *R/plotAADistribution.R
5a577ba3e9954470322fbca7128e2e1a *R/plotClonesCDR3Length.R
97c209055a09782fa65c3e734594f693 *R/plotClonesCopyNumber.R
1e5a1073593373e66431e68b50073f24 *R/plotCompareAADistribution.R
a12be04f6075aade385c65dce4da5adb *R/plotCompareGeneUsage.R
c87f789142352463c46b72ec8429258a *R/plotCompareTrueDiversity.R
acb725f71a84bfa64c183e94de0ba85d *R/plotDistPCoA.R
1ad91e38d892ecb4ea633e8c08f06654 *R/plotGeneComb.R
ab95d1c85a8aa365db3938a81394f72f *R/plotGeneUsage.R
6e259f04942e5356bd147d101d968554 *R/plotTrueDiversity.R
a8f01409a69de76992ffdb3cfa96de50 *R/readIMGT.R
6723695afe8b2d97833cbf7fc5aa9985 *R/sequences.distance.R
0c1ff0f17b93dcd9a72961c83bebd09b *R/sequences.functionality.R
e85c7af9342099ba63d9b9a0c522c5a2 *R/sequences.geneComb.R
e9d4620b65029ad38e73261095c51f4a *R/sequences.getAnyFunctionality.R
6aba60deaf1ec9e212073d8d3627c82e *R/sequences.getAnyJunctionFrame.R
a6c5b5692d13ff76d254c4807b275b6a *R/sequences.getInFrames.R
171c10f4c50875b4c458fdf6475cdd15 *R/sequences.getOutOfFrames.R
7243f6192880758216e60bd34d4277f6 *R/sequences.getProductives.R
5c364582500261e1970b07744a1665ba *R/sequences.getUnproductives.R
a580779d22b8952f10eaf163f6f8b52c *R/sequences.junctionFrame.R
348a8cceedcf61d01fe21230f7d188a2 *R/sequences.mutation.R
d5d7747f5df12cbf60a5fb2ef3e495bc *R/trueDiversity.R
e8464eb3fd0602ccec8460d236508538 *build/vignette.rds
725e6fb5ef22b5e1fb264c2ec1bdb6a0 *data/aaseqtab.rda
a402a38483c05bf013075ca27d5e944a *data/aaseqtab2.rda
2390aa068cf9e292e1634bec6d1e14e7 *data/clones.allind.rda
50590df829c10679d071dfb13560feca *data/clones.ind.rda
69c44ab9d58bbc6dc04777fac0e459c0 *data/datalist
50f5476a3d17177d62ffb1f21294e7de *data/mutationtab.rda
b50ce7d213452cf4ef47fa69a5b866b0 *data/ntseqtab.rda
2ffdac7936f94a6c91f54652018cd290 *data/summarytab.rda
c03cd42fde754f88841cee5f39f21c80 *data/vgenes.rda
bdd000a7910b2485fcb118615275e7d0 *inst/NEWS.Rmd
b1d2340392dc8f8af2d437a9635bf01b *inst/doc/NEWS.pdf
b7e502789d52902b8f9b06fb36c0e2fa *inst/doc/vignette.R
a3f3e5ce158a2fff395db6f003eba40e *inst/doc/vignette.Rmd
8c723ebc4d80fdd9f6e2b36d9c89db82 *inst/doc/vignette.html
f7143141906a88dca0393dc0e30ab550 *man/aaDistribution.Rd
746f08843db207acb2e2cdaeb2a992e2 *man/aaseqtab.Rd
9e45bbc4d5919516cc9bee81c12a04a5 *man/aaseqtab2.Rd
466a94ee98114a6c26f0bd8476a1b532 *man/bcRep-package.Rd
812d7d9913cf09d1305f223981bf084f *man/clones.CDR3Length.Rd
e3f6228d850a14a2354070de028760ae *man/clones.Rd
8c41ca8a2f0f881817a591cddbd61318 *man/clones.allind.Rd
7aa4e331e669db4fff007e5e17fc59c4 *man/clones.filterFunctionality.Rd
f1b91bd9d2b9c21606110c81ec03f81c *man/clones.filterJunctionFrame.Rd
90b69d22813919335914bf8549db393e *man/clones.filterSize.Rd
dc4043b93b624e986470509a17dae67a *man/clones.giniIndex.Rd
f839fa2b6c4e9012c3b6b2a953819862 *man/clones.ind.Rd
2a724f3b2a232a1e59c7fb5962927b95 *man/clones.shared.Rd
8f9a399131219dd76e57585b2a2840f3 *man/combineIMGT.Rd
f6d8f58a629db657c28057e5f53ecb7e *man/compare.aaDistribution.Rd
272164cfeac46b674c275689ba5a2576 *man/compare.geneUsage.Rd
4451b0b56db43da0e80b2e2d27d68b65 *man/compare.trueDiversity.Rd
26c7eeb5578ce5eae1dbf4b1fb5fc3f2 *man/dist.PCoA.Rd
888a7ba2a06d9981f47d51b784c58655 *man/geneUsage.Rd
fe825da836a01ee9ef315e2df7b48652 *man/geneUsage.distance.Rd
c53afebf988f053d2feef5e2d5d47fa5 *man/mutationtab.Rd
5299f87fdcd4e88cdaa23e062f852647 *man/ntseqtab.Rd
8fd6615de5bc66c24db5ad1f9146415c *man/plotClonesCopyNumber.Rd
0a195cb094f2e53fd1b87b67eff25f98 *man/readIMGT.Rd
722a0e5b4871b0d640ce9016ef1fa949 *man/sequences.distance.Rd
d44b7f59390969f207a70ada735ecebb *man/sequences.functionality.Rd
3b81a9045f64a72b9563abf64bef3c62 *man/sequences.geneComb.Rd
6046bbd94169f15cab4311e4b7ee25fe *man/sequences.getAnyFunctionality.Rd
070be9fcaab59415ae27384238d5ce29 *man/sequences.getAnyJunctionFrame.Rd
04cf3913cc5b01ad0b8a299d1eced123 *man/sequences.junctionFrame.Rd
8b8f258abe227807baae0e1cc5498814 *man/sequences.mutation.Rd
bffb2fcc612c5626850808b456b9ad80 *man/summarytab.Rd
bcc5c210edab67dd8a960c2f33dd6c2b *man/trueDiversity.Rd
495f80c02805bdeab98a5ff218d162c7 *man/vgenes.Rd
a3f3e5ce158a2fff395db6f003eba40e *vignettes/vignette.Rmd
