34695db9537e3e9545c121b7daa9a96f *DESCRIPTION
9f49e6abdb4d787202443c08418e8994 *NAMESPACE
9a63ff575a9e626669b296a1995c396a *R/accessors.R
de3269aa49a0c976d487f6e8e3e370ac *R/add.gaps.R
0571eb4d2efb6c6fb194763d6747e974 *R/concatenate.R
03a3f74a056bb6892801cdc1b861a362 *R/datasets.R
e914470e4a596b3ea965a232e22dcd26 *R/dist.R
d02f8a37ac063036ca9a2c9acec69476 *R/doc.R
642fc2b1a2843aece4ef8d99b0171927 *R/exports.R
b80a27b5831f4e2594d5db38e4d480f2 *R/getTree.R
4403c757553d0637b30d5e3674045b2e *R/internal.R
59ff39655b8dff0678bf46fbd7428d6f *R/multidna.class.R
286d32365319e5d57b624384190f7728 *R/multidna.constructor.R
49208445e99af271bc50e5217d9abc89 *R/multiphyDat.class.R
99ae59aaa2a3ec34dfb980f5fe413779 *R/multiphyDat.constructor.R
fc3d34dc98511d608fca650d1bf727d2 *R/plot.R
c10e5d64e50ff8dc19d463b493c724b4 *R/readfiles.R
7a963df75888f19ee8a8af40f3210ac2 *R/rm.gaps.R
28f08fccf04bfe13186eb0deec9f5bf8 *R/show.R
22bc0c9246db8a77608e142af82649de *R/subset.R
534a158d5eea4213dd1a36ee436ab4c2 *README.md
09570e9c6263e569a52515e1aedb73e8 *build/vignette.rds
578526a8489651f18fa1d0d421a58090 *inst/doc/apex.R
124534783206773fc894ff8f504486d2 *inst/doc/apex.Rmd
1344726785cac1dee39e580dd4e1ae2f *inst/doc/apex.html
9153e1e71df1d0ffdaee7e69f291b93b *inst/patr_poat43.fasta
49ae6851973377bde9287e1f12e17039 *inst/patr_poat47.fasta
80b8bdab91a3bd769896fb921d670562 *inst/patr_poat48.fasta
b261f01a6b74f7ef51f605faac4fd68f *inst/patr_poat49.fasta
69d1094dd140f9b9efb79bab9a074054 *man/accessors.Rd
d66378855a248044e830e5cbe48d92ed *man/add.gaps.Rd
a0cdde2653ab8ba3bcc8d30cf29fb656 *man/apex.Rd
f6a62a681f3e4296d954cc6b3148c14a *man/concatenate.Rd
06a9cf1a2c7d665032fe8055f35ec19a *man/dist.multidna.Rd
dd11b29c161d555c43a59d09b4e358bc *man/getTree.Rd
3eb2a524d630664162585a49bbd92efc *man/initialize-multidna-method.Rd
5f3c2493c43e05a11800cf41432747ac *man/initialize-multiphyDat-method.Rd
81ee6f79f26c8ff0a888de1e0d5652ef *man/multidna.Rd
67a0738fc5a1fa1a9b84498a21ed825a *man/multidna2alignment.Rd
0b71ec16048fa1c8d5948c015620837c *man/multidna2genind.Rd
dc97795aabcd7f1a73299a5d99bef70b *man/multidna2multiphyDat.Rd
e4dd9ba6a069f13bc2ad577337fc6ae7 *man/multiphyDat.Rd
7cd3ebd39c00d23d3ffbe9e47affc438 *man/plot-multidna-ANY-method.Rd
39e373fa9718a62f215a227c8d01e821 *man/readfiles.Rd
d3f0331c69b21ee199d41c3e46938107 *man/rm.gaps.Rd
a5259b8aa9a10afcb8b2453c6c60c4ef *man/show-multidna-method.Rd
6f5360322ebdca967cb950fc6f196f61 *man/show-multiphyDat-method.Rd
d70f568c2cca8e9d9242e508e0604d16 *man/subset.multidna.Rd
77cae94d75d005e65dc4860894d61e2a *tests/testthat.R
0729339aeed636286b479f53621bcef7 *tests/testthat/test_export.R
124534783206773fc894ff8f504486d2 *vignettes/apex.Rmd
f512f3d9d0de04c38c4496c1caf73e20 *vignettes/figs/class-1.png
4329f4dcb0537b6d5217953933822f99 *vignettes/figs/class-2.png
8dbac269a9498d4360b622cfb01d87d0 *vignettes/figs/concat-1.png
c8c0a987d49f80dcf9299c91a3746aef *vignettes/figs/concat-2.png
6753355981520de322e16e41585c4cb4 *vignettes/figs/handling-1.png
f17f827f158e2d509ae453a5d0bcbbb8 *vignettes/figs/handling-2.png
e8c24a07a3e9ce0f1fee860cd89f8a4f *vignettes/figs/multidnaclass-1.png
0a7bcf34a54503dc79639439e6c40e3e *vignettes/figs/multidnaclass-2.png
04ae90781dba3d5946aa4e3091d69c64 *vignettes/figs/plotMultiPhylo-1.png
07e30ad059b194de386fc3494beb241f *vignettes/figs/plotPhyloSingle-1.png
3cd46e6ea91cfdc35286428e6e0245ba *vignettes/figs/plotPmlPart-1.png
6753355981520de322e16e41585c4cb4 *vignettes/figs/readfiles-1.png
