720b0b4d6218046bed43ce38024b2f30 *DESCRIPTION
a66beb4583f962bc4e331b3128738a7c *NAMESPACE
61b45a3596ec9bf710a2d95c5c51ae87 *NEWS
e371b47571466583c9c10e91c15653a3 *R/CollectionOfInputProcessingFunctions.R
394af1a32fafcdcb46e1ab2fd72d7c14 *R/PPP.R
16f1f5641998608f4c735d6b9198b945 *R/RcppExports.R
e4fdbad8101cbda0c537a707a92395ee *R/T1perGroup.R
b11a07ea822036f544e4e16ef537b562 *R/TreeBUGS-package.R
1fae833bd00f37f0dc552e28122f5cc2 *R/arnold2013.R
6ce9e6002a89a7c18efaa601a69efa0d *R/betweenSubjects.R
573575f06edcb8048ed12a2084a7e69a *R/callingSampler.R
be1058fbcc126500bed01f65e5b6f3db *R/checkFunctions.R
a8af8a27083930b4bba6b15e08dd01e9 *R/corSamples.R
e567b74107c362b0cd9c8043fb267335 *R/covCorrelationString.R
8a8a1019dd89ef7880b69dbb8dc2c469 *R/covDataRead.R
13de4c675f54042227fde73113a12f95 *R/covFactor.R
025b0f21335e9c37684b05d20442347e *R/covPredictorHandling.R
eeb8e47385b05e5c56e46b09bddd3eb1 *R/covariateHandling.R
8f2c4ab29ea8a2e4f06165390dc27084 *R/extendMPT.R
cf4f5f99879d8ad6a095aec56a231af5 *R/fitBetaMPT.R
ff00c2901b4e2e983d4985c5906269ed *R/fitBetaMPTcpp.R
92c016517fa3069daaac62b1d3eb118a *R/fitModel.R
b1384b8cfc845b2ff9dc8428e6eccf5c *R/fitModelCpp.R
7a325e491979deacdb029a50ce216af2 *R/fitSimpleMPT.R
89c3049fd25c0975b156144a941d4ec8 *R/fitTraitMPT.R
8f110eb4ba2a0f4ec076d3a048000f7d *R/genDataBeta.R
df907721e5f348c83c2c4c6b15c416ba *R/genDataCheck.R
83b502ab157456dfd57cbd07dd5cf704 *R/genDataMPT.R
8a4bbe687cbc086622c5db365fd5de9d *R/genDataTrait.R
c6b9f952fafa323ceee7e9fdbe2073bd *R/getGroupMeans.R
6949f17c38b9de68671a85a1ad49f532 *R/getParam.R
2984746d6aeac3d28b560dcd0a61d8cc *R/getTransformedParameters.R
ac63918ad978f9edd18ec4140f1bbe3b *R/makeModelDescription.R
04b4ca8a301d5829072587c1fbbd3efa *R/parseEQN.R
dc80cea1054107870028bfb3f82eb9c5 *R/parseRestrictions.R
67536165808b5e49d9937cdbdc445485 *R/plotConvergence.R
1445fdfbfc56dcc0b227eb0e8e96d538 *R/plotDistribution.R
2af9cde4b0380b0d367794e15c113082 *R/plotFit.R
f486b47dcc883f01059cc875c9c54541 *R/plotFrequencies.R
8957f39d972057362c2ecc53e6d028bf *R/plotParameters.R
933047b2b2b945572a69624050dc912e *R/plotPriorPost.R
cb5a709aa7d93885723a327ce88099f8 *R/posteriorPredictive.R
c2e01cbc66813b15f444686b9d37f9a0 *R/printMPT.R
7894d518529208bf04a8c9d3a0ea0570 *R/readEQN.R
2e02684f789171c8c08c10dd84ec6cb3 *R/renameBUGSoutput.R
5559038ea2d2a89992a0b03f98ccd331 *R/summarizeMCMC.R
8635f888c73a40e7cf161b12f76273de *R/summarizeMPT.R
919d5120b34bccc0facce144169105b6 *R/testHetChi.R
841b475ec9ed40dff8a9dce02703752b *R/testHetPerm.R
6316d30d5b102da353919b6b3f8c5d8f *R/thetaHandling.R
502d78165c5bd5eb54af1a5bfdaf7cc3 *R/writeSummaryToFile.R
345683d966e267f715e2299dd6cb4960 *build/vignette.rds
71355a4f936ee6d3f69e673fa73d4237 *data/arnold2013.RData
5618ad35b10c1f097ae49a607179b796 *inst/CITATION
05e74db71d7fafbaacb957b1daa34dba *inst/MPTmodels/2htm.eqn
d9a6bed11ce4e4545fd0001882d8b950 *inst/MPTmodels/2htsm.eqn
797103cbbda897f9525caffeb124cb90 *inst/doc/TreeBUGS_1_intro.R
de87a4956855961f3621624905f51519 *inst/doc/TreeBUGS_1_intro.Rmd
7d2fa65befa258390ff5510f054ffcae *inst/doc/TreeBUGS_1_intro.html
c6f53635c6e3eb23c9980e5a0343a234 *inst/doc/TreeBUGS_2_extended.R
e39f1a4c9d9c25ce90f483f2253b50a5 *inst/doc/TreeBUGS_2_extended.Rmd
c8a4ad7da9b1950ce4044ce0e8b24f79 *inst/doc/TreeBUGS_2_extended.html
f2e879ce4d415deca0cbc9932e28d1c6 *man/PPP.Rd
cfa94c3e82da04fb3555b48627b6da79 *man/TreeBUGS.Rd
dc4c4fb298ff2c2bc95a8b0020396690 *man/arnold2013.Rd
4e44e838f0ebeda7fc7b5917903d30e9 *man/betaMPT.Rd
f94a9bf34ed6278aae79c9f9e16e51a0 *man/betaMPTcpp.Rd
15ea3a0deca45718882810676d0ee32e *man/betweenSubjectMPT.Rd
18218d15b382653af9bd24491b6d8518 *man/extendMPT.Rd
9d57cc4ec9004c534e1c67bd6a6764d3 *man/genBetaMPT.Rd
1d409d6b5faf6c865cf4b00ea9c1f72c *man/genMPT.Rd
bf249e8f1dc91ad67921876cac66f12c *man/genTraitMPT.Rd
d2332c80706738bef1acd597138837cf *man/getGroupMeans.Rd
c70d1b908cc65b9360c33ad0810e5b2d *man/getParam.Rd
67670464d730725f2b2fe89b89beb907 *man/plot.Rd
cabd721d620a1d08e842d76de2bd91c3 *man/plotDistribution.Rd
08b33a5815b223832a12c786c1461217 *man/plotFit.Rd
98bcb4bf5ab1378776b1b2ab86865421 *man/plotFreq.Rd
32083e1130651099117c3616d7188692 *man/plotParam.Rd
bc219631bbd1e4f3837174aaaae1b836 *man/plotPriorPost.Rd
17484a598720f390e4e6840813165e36 *man/posteriorPredictive.Rd
3d730ee2fbced550d2180275029d1f89 *man/readEQN.Rd
92bc72cc6ebb5ca349f8eca4148eea15 *man/simpleMPT.Rd
76f2e71a96285bb60499376255dbf99a *man/summarizeMPT.Rd
b20bf38cb497dff11704c8e27d948008 *man/testHetChi.Rd
7d5603f4a47da8ac3f41e95b3f039cc2 *man/testHetPerm.Rd
b9b4aa07865914af25d97d531a86a2d3 *man/traitMPT.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
8d46d69896a1f1d31ed76035a0e49d67 *src/Makevars.win
60e9f220354e0ef8403715ac2dee998a *src/RcppExports.cpp
1f5eb9c612bd4e2d84a71b406dfdc81d *src/betaMPT.cpp
de87a4956855961f3621624905f51519 *vignettes/TreeBUGS_1_intro.Rmd
e39f1a4c9d9c25ce90f483f2253b50a5 *vignettes/TreeBUGS_2_extended.Rmd
