9f5555dcbc09672a249f37e736491d26 *DESCRIPTION
374f15550c7a22af3711c0e99e418bab *NAMESPACE
fa60061d29d52219592a940b69e31d72 *R/GWC.R
5dc4cfb09d006998b95ac0c513307ae5 *R/LogLogisticRegression.R
b9eb1c2d8a3a7e202b2b8f2e71e57224 *R/PharmacoSetClass.R
27cfdbca54ab12672a8b5d43fd0237e2 *R/callingWaterfall.R
e496092258e962d83be708d422f5febd *R/combineTest.R
23a4a6cc5d0230517827cb8cfaa68eb2 *R/computeAUC.R
e47d124450006f07b20b8de632982f16 *R/computeDrugSensitivity.R
4d5ab4de072b32fdd94e0ab814a3bb63 *R/computeIC50.R
d10a69fcaeb28446d91ab73d86bd7e81 *R/connectivityScore.R
610b92bc24b849c72f9a5b7f8eff2161 *R/corWeighted.R
75861da0497751b86447bc3a4a5e8402 *R/datasets.R
6469dcaf0d018e5bf1298dabb6560c05 *R/distancePointLine.R
8361cf02cbbf07841b60948e20086e82 *R/distancePointSegment.R
a14c3174c801721bffc0ac94647d9929 *R/downloadPSet.R
d4dcb7a4aa49a89f0ed8699cf4da9cdb *R/downloadSignatures.R
8318d45a3b284d4c69194da221f3b277 *R/drugDoseResponseCurve.R
ceda526812743a7f763b57495b17025d *R/drugPerturbationSig.R
f866a39f8be9c6032c3d008a59aa764d *R/drugSensitivitySig.R
c3ce0daf64ce4be7f5b598ee43be14ec *R/geneDrugPerturbation.R
7cd1b1c2485109d52995261f3464cdf0 *R/geneDrugSensitivity.R
2aec37d37a7c50d95865d86675dbb388 *R/geneIdMap.R
320d015a422ce2528841bd1927b1f5cf *R/intersectList.R
bd6a097da66484df639d39a107e8a04d *R/intersectPSets.R
1e91394423bbafeb1ab946e24723a7e5 *R/probeGeneMapping.R
0b56c4b071baef88ce69f32dd8abf6c4 *R/rankGeneDrugPerturbation.R
e5a95a203af72ec8e75062947bf9f4c1 *R/rankGeneDrugSensitivity.R
93f580ecca9149de64874d6d8f5b8717 *R/signatureClass.R
72b18386d4f690d72003064458cd22e1 *R/stripWhiteSpace.R
3c56f2e9feb0c9d4ba688e262da50c0e *R/summarizeGeneExpression.R
6de6e419b18b1722fbedbd0b99b04998 *R/summarizeSensitivityPhenotype.R
84a058422b0e842b7f84a1d39ab18da6 *R/unionList.R
edcf760dd5ac1afe6aa704ac746b22ec *README
724c78f4d9f6f02e031c1ca56c6b27ce *build/vignette.rds
cd197570d0bc91a9343cac3f332c6325 *data/CCLEsmall.rda
0ecef42581243a541ac64d7e7b149f65 *data/CGPsmall.rda
fddf29e79ef2074fcc87ae846bcd41aa *data/CMAPsmall.rda
0c67ad28be233aaa344d7e7b659402bc *data/HDAC_genes.rda
f407e1c5c77e062f1e565f12ef434fff *inst/CITATION
32fed253d8cd65a4a0f527f4cef40fdb *inst/doc/PharmacoGx.R
13a8e0afeb4eeabcc7dcccb52c9bbcb6 *inst/doc/PharmacoGx.Rnw
f6d3004a99bb9079ef55f84b25fe289c *inst/doc/PharmacoGx.pdf
ce0ead69148fbe8a31a8af0bf372481b *man/CCLEsmall.Rd
809d7716c89d57d7dc7a5e88eb07227b *man/CGPsmall.Rd
63bc5587bf141b425e6eef540d3ab82f *man/CMAPsmall.Rd
2db92ae4a4e12104f736e9663cd3cc35 *man/GWC.Rd
c1bc70c5f4159b6621fe3a3dc73dfdbd *man/HDAC_genes.Rd
788a113dfb71a2f5066b92606810999a *man/LogLogisticRegression.Rd
9d3154cecce8f60d0d92430a00ce190a *man/PharmacoSet-class.Rd
5543f22be0aaf8354fa69914bea0240c *man/PharmacoSet.Rd
3da26b01d50e2368ce20d91aea64f5a5 *man/cellInfo-set.Rd
82f5b39765546bfd630f0b5b49ff96a7 *man/cellInfo.Rd
41deb6e9f23f53cc21c2cee6b24a74cf *man/cellNames-set.Rd
78a78ec5f21a0d69bf6157da7c0542fe *man/cellNames.Rd
e06c3dff0e193dc9a8083055cae0196f *man/cnvData-set.Rd
346ef5193a256de364a59c76dc0d799e *man/cnvData.Rd
d407cb7266b5fbffe64fc566a9c51d5e *man/cnvInfo-set.Rd
6cebf3ee01e34f311b3c884b215897eb *man/cnvInfo.Rd
fb326eeaa8fadeb78327283696809eb6 *man/computeAUC.Rd
d3627cab2d41b2315ab801850ed6acea *man/computeIC50.Rd
b3d32d538e5b7defe4266e869896ae0a *man/connectivityScore.Rd
cb3208411e95d1d3c3a96f0466fe51aa *man/dateCreated.Rd
0ac2a23b9c874ea68077740ee2798b08 *man/dnaData-set.Rd
8c66a8d0d9b1dfa0d0e2fbe33f97c3b3 *man/dnaData.Rd
b27c00800e47d6bed108dbf6c899786e *man/dnaInfo-set.Rd
2795d68ec5cc68951ceddb6fd75594e1 *man/dnaInfo.Rd
b539f2ee0d76361eab288c47654ed238 *man/downloadPSet.Rd
8893032d7cfde1b8dc937975b1407a60 *man/downloadSignatures.Rd
dcbc892e5932c51835d50d50aab71e1b *man/drugDoseResponseCurve.Rd
6c31820f8a8ae5f5f3d9099f48de2d02 *man/drugInfo-set.Rd
4682d85d183bf373e2519775c0506fd4 *man/drugInfo.Rd
e4542d879d200c0275358f91b90ca77a *man/drugNames-set.Rd
440214ee9770d1c3517013fa952b545a *man/drugNames.Rd
0408cd78085e1f7089672a317f37fc29 *man/drugPertubrationSig.Rd
5614a0a76d09b8c4718fe661ab88a0f8 *man/drugSensitivitySig.Rd
ba7a844b73e6af267e1cb3c46ab129a4 *man/geneInfo-set.Rd
2b20e8c2fe9df31ebe7f5c9e7cfc383d *man/geneInfo.Rd
0c2de30ca146add701f73b1562625e26 *man/geneNames.Rd
60bc9a3ef18e038ecf69cd32dd56171a *man/intersectList.Rd
cf3aabe14859b107b62f9c62caea4d62 *man/intersectPSet.Rd
fff5f711742cf34676a62827770ee560 *man/pSetName.Rd
130bdcf2faa71804554dc82c734b341c *man/pertNumber-set.Rd
c49271974e84b34b308cbdd4034fe730 *man/pertNumber.Rd
ddfcaa3b224f2f66a1632b210dafffcb *man/probeGeneMapping.Rd
4129d0601e0ae100b4cc5174336aa467 *man/rnaData-set.Rd
558811cbeb3a37e4dabaa8e5e835784c *man/rnaData.Rd
20e1a488059e85bb306e8bf2baec1ccd *man/rnaInfo-set.Rd
bd24149ea37d7bf194ef7bd6b3a261b1 *man/rnaInfo.Rd
a7ab09b3f118c5ff556bfdee48b9c6eb *man/sensNumber-set.Rd
49cb7391d881d5d7f5f49eacfff92b7d *man/sensNumber.Rd
b21716f33a3de57398590cfd3c598d44 *man/sensitivityData-set.Rd
8fbaa57f6d8fd7c8a8f111ba838a546f *man/sensitivityData.Rd
677aee26a5f354fb5d4a2e6c8f90138e *man/sensitivityInfo-set.Rd
1e92d2f7cc4eedc275ec97ea08ff8496 *man/sensitivityInfo.Rd
ebd0ad39cfc6bf38d01450ea26a4898e *man/sensitivityMeasures.Rd
4930a4f1af52f578ef2240e6c4f08df3 *man/show-PharmacoSet-method.Rd
3ef97409b0ae027eb5b8dcb0ff92d42b *man/show-PharmacoSig-method.Rd
ffda236e92b4e0dde23a16c66c61479a *man/showSigAnnot.Rd
d737523b11d7fb64ae5f7b72df967841 *man/snpData-set.Rd
0886a0c697456f3a5bbf7d9595fc8c13 *man/snpData.Rd
93c34551538d7ee716727ac032930112 *man/snpInfo-set.Rd
566347bcf012822fdee7eb8e98c9fdcb *man/snpInfo.Rd
cd6b81abd508e8d02d542d2319076202 *man/sub-PharmacoSet-method.Rd
9b0ebf0c3fed989b810c912e5c51d51b *man/subsetTo.Rd
24523d5601b23afbb5c6920d99d2e900 *man/summarizeGeneExpression.Rd
725baffeec3fa28e973d6618d23a0425 *man/summarizeSensitivityPhenotype.Rd
457364fbacccbf46552de93a86e7d919 *man/unionList.Rd
13a8e0afeb4eeabcc7dcccb52c9bbcb6 *vignettes/PharmacoGx.Rnw
0a1c145a5ef73983dbbf130e0ced5379 *vignettes/biblio.bib
