68de4dfe94ae1fcb9684cec9a527fa23 *ChangeLog
63a8b39cd7dd4c3cb29aec34ae338c97 *DESCRIPTION
cea42a0c4cc1adfb93793fa42a65cb93 *NAMESPACE
641a49414cddb47e0a15db0946dcc008 *R/generateData.R
3ed9950f2b088b1d29a63d388b1e366d *R/postProcess.R
fb7ebc7e98e4c1f7ab33622a19688ed0 *inst/CITATION
98410bb26034cb05244d8bdf4ccede2c *man/PReMiuM-package.Rd
7c7aaf54cdfe577a66bbdf6d810d1be1 *man/calcAvgRiskAndProfile.Rd
5b0661ee97d90935a8ecc77f033f5b60 *man/calcDissimilarityMatrix.Rd
17f160cb85028d3ecd78d64dc156972c *man/calcOptimalClustering.Rd
cff86cd1abf279307a536be56357ae35 *man/calcPredictions.Rd
b30fcfb1929d6be28e733d88de723f58 *man/clusSummaryBernoulliDiscrete.Rd
43adc7989c731e5c40f833ba5e9ae78d *man/computeRatioOfVariance.Rd
61eaabb309c267e81fb2325c666c1650 *man/generateSampleDataFile.Rd
839b7e11693726a8a42513ff737ae360 *man/globalParsTrace.Rd
163bc0ade521f05db94db654c1e03bd9 *man/heatDissMat.Rd
e117cde71deb3b15f849cce1329d6ed0 *man/is.wholenumber.Rd
3ce497dc03761c5a579850be60bb8eec *man/mapforGeneratedData.Rd
671c971ffc047885897ab73de037a44b *man/margModelPosterior.Rd
90c008a868f4d4f27902c3138952eb31 *man/plotPredictions.Rd
db6aae9c9507ff81989144fe65cc8f06 *man/plotRiskProfile.Rd
7b121a847631b1b13bcbe8556330f2b5 *man/profRegr.Rd
656d163a3289d5593f81fdd53b44168f *man/setHyperparams.Rd
dfe70155d75966b92818e7cd55a4fc11 *man/simBenchmark.Rd
8c98f2d8ffd57beecc24f1e9b9a2bebb *man/summariseVarSelectRho.Rd
095e4fcb51c7cb0fad4f43c27067a3f1 *man/vec2mat.Rd
4521ea0efdc3d776b1b85431d5890226 *src/Makevars
48e7eaf9267a2fabf3db0f222176c15d *src/Makevars.win
4091e8830197b5a2107f078ced1ecf28 *src/PReMiuM.cpp
e8874429871f085852a33bc059ded88f *src/PReMiuM.h
286728e7f8739437d51adbab11252bfd *src/include/MCMC/chain.h
f3b7c7dca9852a14ca97dde1474bc844 *src/include/MCMC/model.h
7b1662bce2dfdff44462ef8ec96be602 *src/include/MCMC/proposal.h
3ed0a0c44aaaab43b4ee662cf020c03b *src/include/MCMC/sampler.h
361ed29fc464e145b9e405d6c34a12a2 *src/include/MCMC/state.h
8cbd6479d36b67a926733dfc973fa17a *src/include/Math/Error.h
8732db53ed9ff62826b74051a774db1c *src/include/Math/ars2.h
160829620c619d646c666b626e6dce94 *src/include/Math/distribution.h
bc940a165869f9ea456ce3a1e60397df *src/include/Math/mathfunctions.h
18ca00c69ce7cb5f4010ba6483e03b65 *src/include/Math/random.h
6bfaee9730088144909c718c7dfeff75 *src/include/PReMiuMArs.cpp
8e961b15ee36eaec56123857d8fdcec4 *src/include/PReMiuMArs.h
23aa85c3cae268d2a53bf98cee2210b7 *src/include/PReMiuMData.h
1c101066798dda21f696707f27e451e2 *src/include/PReMiuMIO.h
a9415b655513fec8a186d0405c93c54c *src/include/PReMiuMModel.h
cfc4822d58640d2b60f77d54396be868 *src/include/PReMiuMOptions.h
41033f5e1d591a831f2c1222de1847c8 *src/include/PReMiuMProposals.h
7b2c4e02a59d721841a6d96a027ae0aa *src/include/postProcess.h
e4445462dbd8c92f213b0669d0fa5e52 *src/init.cpp
0b7cf9bef2c4641aa5c0fa48a61aa7a5 *src/postProcess.cpp
a517379bc28e8d5d2124be84a008bdd1 *tests/testthat.R
018cdc76b71295b7c528706bd2ff038a *tests/testthat/output_alpha.txt
4439a7a296ee24e78e402d0cd534fa27 *tests/testthat/output_alphaProp.txt
8ab7d5cc2cd44da7c6f2cf56e97dabe1 *tests/testthat/output_beta.txt
9206393a9e48ffd02a2369608bbd6dcd *tests/testthat/output_betaProp.txt
d41d8cd98f00b204e9800998ecf8427e *tests/testthat/output_entropy.txt
fc2ce89fb51977a9ed9db63920ac386c *tests/testthat/output_input.txt
10974abdbd9bf2de5ac90cab1d6fba0c *tests/testthat/output_log.txt
980b27477f9fd672f653ee9085ce5049 *tests/testthat/output_logPost.txt
fe9d26c3e620eeb69bd166c8be89fb8f *tests/testthat/output_nClusters.txt
4286fac078a80ce84cf4f3b115d56e8c *tests/testthat/output_nMembers.txt
68b06c0f0b6936af8e2b9960224abe80 *tests/testthat/output_phi.txt
aa59d36d470eec2ccfc53f213c6c5e24 *tests/testthat/output_psi.txt
5389cf276507dc0e0c895c119bba17f8 *tests/testthat/output_theta.txt
698c7282707529fc845acc729b2f76fe *tests/testthat/output_thetaProp.txt
6d28bf363bfdb65dc3f5b7179ce89d50 *tests/testthat/output_z.txt
195d77e2bc991229f3a740b59af4aaf9 *tests/testthat/test-calcAvgRisk.R
91fb31b32b69797f25a32b89072d1f5b *tests/testthat/test-profRegr.R
