3ff24f0f7c3c8c814316fae6bcc67e78 *DESCRIPTION
d553f025c2482edda8f611b04e137d5a *NAMESPACE
9abcd01a151a92aaac72a12114a90fb0 *NEWS
1abe0d8e8d919931d960aadcd8d9c8b6 *R/CSEGriskfigure.R
05b473278c51a51cfc41f75916fc886b *R/CSEGtmufigure.R
e8134c5ba63cbea6fe01782351c56ccf *R/MARSS.R
1bdbc584903767a524404d57ad6e5cb3 *R/MARSS_dfa.r
809d2cb7063cbf0ff60cabf03e6d63bc *R/MARSS_marss.R
95c9f92c565b9c2aa0e385f35050e0a2 *R/MARSS_marxss.R
fad6a58a0fa1ffc7bd7d08f7df6bc97a *R/MARSSaic.R
22ab9d7d84cd9c3f6234bbfb15b82751 *R/MARSSapplynames.R
818f47b00a0191e1d0539cebbc12d690 *R/MARSSboot.R
a750a546e74d89624a8472ed36e4b74b *R/MARSShatyt.r
35f85af22ca87f2d2bf88dfb8b31c123 *R/MARSShessian.R
a5b505fd93b3ee31ee77dc33929cec2f *R/MARSSinfo.R
bfe45caf25f18d94a1e51086907cbe32 *R/MARSSinits.R
ba999daba3633bccb92a977390571797 *R/MARSSinnovationsboot.R
5599992db1590670c3857595ef976ee1 *R/MARSSkem.r
265834d0ef3f2201dae26dba1055876d *R/MARSSkemcheck.r
aaec1bfe9f631348236034f801e9222b *R/MARSSkf.r
9827c7d9095d2fdcc35d15e882ad3896 *R/MARSSkfas.r
2044794904f14ff4836c9c113cc35c26 *R/MARSSkfss.R
1edd64499394c36d5c57af66fa76b7f8 *R/MARSSmcinit.R
6d6510634880c2c9db25802df98b9671 *R/MARSSoptim.r
0d88473d8da4901ce4c4ce844c7f36eb *R/MARSSparamCIs.R
5f4a9f03f2533af588e100e4fd4d2bdf *R/MARSSsettings.R
8abc2d211af90defd754b5f2a656c932 *R/MARSSsimulate.R
0b616b2b8678573362a63dccbcd327df *R/MARSSvectorizeparam.R
6422a33e78ae7da298555a2ee825060e *R/checkMARSSInputs.r
661053ccfaf2603a3477378d2cf1ed37 *R/checkModelList.r
35cb9fa0b739cdd11a20ef93607185b4 *R/coef_marssMLE.r
5262a88207aa638f2581925d12ee0de2 *R/describe_marssMODEL.R
60e77314c0d8fae175df8ae110d32bc2 *R/diaghelpers.r
ed1a2cf56a5a34a10bbe6c3fa8218b24 *R/is_marssMLE.r
5bbbb3a63991ef35aa67eefac318cc2d *R/is_marssMODEL.R
ca2f7e58bb56da635996d5feb3cc9ea4 *R/onLoad.R
651910429d6b1abbc29c648d9ca25e1b *R/predict_marssMLE.r
d8667c07ba9c3237880dd20c6ccade17 *R/print_marssMLE.r
0242c4f9f5451ca9e7bd864614d2d1e9 *R/print_marssMODEL.R
bcd44db057d73e13e3b255048bdc0237 *R/progressBar.R
67be54dfa5e038d85f2e60cef651381f *R/residuals_marssMLE.R
14f8aaa33903c8bc4cb7a3f82ca96b7d *R/summary_marssMLE.R
b2d9908b4bc8a3809a8f0a92788d8ce9 *R/summary_marssMODEL.R
57734b3c198c51b412b22669f58b8890 *R/toLatex_marssMODEL.R
802c1fc4ac262bc8e474266ede9986c7 *build/vignette.rds
40e919bd17df7ed8530c6bfced827ff0 *data/SalmonSurvCUI.rda
6a368bb265850d260a4ade1f5acc2ef0 *data/graywhales.rda
9687fd26d1c7e37deb713b5d15c39d84 *data/grouse.rda
120adc7ef4f2f094afa36bb345c1fc13 *data/harborSeal.rda
4dbccc6fbad7f2d5e21cee4d4f9962a4 *data/harborSealWA.rda
0110004df78fb4604ef464cced89f5cc *data/isleRoyal.rda
0ccd31eb359d325c51fca61107a40d4d *data/ivesDataByWeek.rda
54d4546697857f1217aafa15f4a93557 *data/ivesDataLP.rda
b221b6199191929a3e9a7308b024dff5 *data/kestrel.rda
64af6856811e7129be051c64a4c305ff *data/lakeWAplankton.rda
3ac0630c867dd992eaa9e1a3629261fe *data/loggerhead.rda
7461688b324fce41b713db0d90dbc451 *data/loggerheadNoisy.rda
7dba40d4261dae2282fce64e7a4885ee *data/okanaganRedds.rda
9e1f016e8a44722b82c4537c7a4c8bb7 *data/prairiechicken.rda
739f2f53458171d2566e20a5336345d1 *data/redstart.rda
59a0eba4833c80a67f0c0eb401578cb5 *data/rockfish.rda
ff1f8311cc96d406be8e6304e775d1ed *data/wilddogs.rda
58870706c4dab590287f7e746fe6fd41 *inst/CITATION
4fadf345d14ddb9625ce270bb90f5d50 *inst/doc/Chapter_AnimalTracking.R
80efad02baece8370cb3bd599bf4ee40 *inst/doc/Chapter_CombiningTrendData.R
f5f71fceefaff3f4e748da4e9fa1f126 *inst/doc/Chapter_Covariates.R
9b4560f51583abceb84a450f0cd01937 *inst/doc/Chapter_DFA.R
e9027eca4e9f117c1956f752ea84793f *inst/doc/Chapter_MARp.R
9055af998e9d1d34d2f22a1883f11ace *inst/doc/Chapter_PVA.R
c65f78578d79f4b8b0e415b3d4ca34bc *inst/doc/Chapter_SealPopStructure.R
94a279597ac017540d93f89f12e4fef5 *inst/doc/Chapter_SealTrend.R
17d5b0cc8391c34d608d57585e2633d9 *inst/doc/Chapter_SpeciesInteractions.R
7e1da459f0c86be573b02f5605368a8f *inst/doc/Chapter_StructuralBreaks.R
3095044f03ec6be97654308ef069d973 *inst/doc/Chapter_UnivariateDLM.R
66f9cf89a8fc9d435d0a422f46446c11 *inst/doc/EMDerivation.Rnw
c5acef08a7db964d449f70b022a212d9 *inst/doc/EMDerivation.pdf
6fbc2623c35f686ba2d0a4da0d325873 *inst/doc/Quick_Start.R
d2704509b7f30a6139da800f8bc67b51 *inst/doc/Quick_Start.Rnw
704beca4e673ec47bbd59e0460e8ad8d *inst/doc/Quick_Start.pdf
991d17962a60cb2be17f3098134cfe7e *inst/doc/UserGuide.Rnw
cd2c212f6a53ec406f0cb5d92b6e1e75 *inst/doc/UserGuide.pdf
a1758e0f4b96de688e461b207788f48a *inst/doc/index.html
885d2528f44d191e44e136bcd6ed9ac2 *inst/doc/versiontest.R
b86aeec063520e440b402065c2cdeb12 *man/CSEGriskfigure.Rd
de42e0a513558b7997989f374b13f049 *man/CSEGtmufigure.Rd
09a595fdfb6d849eddb1b4f84d538d57 *man/MARSS-package.Rd
a81856b2c89f7db5a54a0b917370d1a2 *man/MARSS.Rd
fa011fa1bacde1b58024a2853d5e7c5d *man/MARSS_dfa.Rd
4408fed3372aef3c8fa7d13a36eba5b1 *man/MARSS_marxss.Rd
69f50913227bf42b84a2a9f29ddb725a *man/MARSSaic.Rd
deb410f8100eded0c01fc1e27a02eafc *man/MARSSapplynames.Rd
4ca0badcba94b776a304aa664e9eeac6 *man/MARSSboot.Rd
83651b554c1017686ec18c4318a5a8df *man/MARSShatyt.Rd
a848a348411f65bb109a17a3f3eef457 *man/MARSShessian.Rd
0cda1fbd58659618f9fce975a1c383ff *man/MARSSinfo.Rd
8b4b61cc7640088009c8c4f738c4466a *man/MARSSinits.Rd
9237d8327f21705fa13ad5d1df7cbcdb *man/MARSSinnovationsboot.Rd
6fe2eb9b9af0996182e594083318443f *man/MARSSkem.Rd
1e4476ed55175a433d95be87a120b937 *man/MARSSkemcheck.Rd
bcb89130e2f68dcb5789cdfc7390d7b4 *man/MARSSkf.Rd
53f05408b715bc58143c6379cae9e34b *man/MARSSmcinit.Rd
aad5efd52d87d91719672fffa190bdfe *man/MARSSoptim.Rd
578fa9eb158b76e3c56df43b708c1188 *man/MARSSparamCIs.Rd
f8a1908c762350144670d3f98669f5b1 *man/MARSSsimulate.Rd
ea584abf0c548f20eec04d885cc2cc51 *man/MARSSvectorizeparam.Rd
34b33c53c3d35fb715e20b05e8a0f317 *man/SalmonSurvCUI.Rd
82cbfbc0e47812179890c63a345e952a *man/allowed.Rd
aa0964d4ada3a3131cf6764b9501af66 *man/as_marssMODEL.Rd
ea5ab6336505d8f1a86dd5ad28c2bc6a *man/checkMARSSInputs.Rd
3dc719c78cbc66b0a75ad5f8554284c3 *man/checkModelList.Rd
e8c62ca35e9f28b07ea1a20746da562b *man/coef_marssMLE.Rd
25d3963a39f76260940e1f9387d5ccac *man/graywhales.Rd
78cf722a853fd3899d0a5c599eecf781 *man/harborSeal.Rd
cf5beaa8acf25b99b69f660882b733f7 *man/is_marssMLE.Rd
570b705b2072b47b16c032dbcb3d1d1d *man/is_marssMODEL.Rd
1005d4680fd4451d029f36b433ab7332 *man/isleRoyal.Rd
a8517d21eaf41f10a5e2b202ca4380ca *man/loggerhead.Rd
eec12f0022d144b1f6b2dd4ce26d45fe *man/marssMLE-class.Rd
42e8aed2699ef392dd23f56526ca722e *man/marssMODEL-class.Rd
8e7e827e5b1b7e5462f7a4a88032ffc9 *man/plankton.Rd
fb261f06848b5dc7284a5d74920ccf65 *man/predict_marssMLE.Rd
eaea16f8f8e90b19be70a71c0cd226ce *man/print_marssMLE.Rd
c5c96a3bcab1876fd51082c06af87228 *man/print_marssMODEL.Rd
d7cd3b4841ad6e035f3d8afe30c38acc *man/residuals_marssMLE.Rd
daa892a520348de4f1399bae5986338c *man/stdInnov.Rd
55d67bde60c3844af2e03b516b0a5a16 *man/utility_functions.Rd
66f9cf89a8fc9d435d0a422f46446c11 *vignettes/EMDerivation.Rnw
c5c450062463f8648c294601f0aad245 *vignettes/EMDerivation.bib
d2704509b7f30a6139da800f8bc67b51 *vignettes/Quick_Start.Rnw
991d17962a60cb2be17f3098134cfe7e *vignettes/UserGuide.Rnw
