f73323d8457eedf4003776ed07681ee7 *DESCRIPTION
19d198d14e75ce349e1a56e34348334a *NAMESPACE
6fc76c276cd6871ef6ee6018886dd179 *NEWS
af35d49161d4c3ede189d11bb52ceaa7 *R/AllClasses.R
8a5171f1b5e4d402b7c31e72c98520e8 *R/AllGenerics.R
28e3509315ed75a3a36fc85d8cbd5135 *R/Deprecated.R
b873a74569968e09ef69ea7b1c33e639 *R/alignSpectra-functions.R
9d593c0b243fa8f5dbf4e79085c8683f *R/approxfun-methods.R
6bb19116660388bdade12b274bdc3648 *R/as.matrix-functions.R
4d3be472437f0cc9607b100b213e534e *R/as.matrix-methods.R
b448406346f9406113b791665323624d *R/averageMassSpectra-functions.R
1a77e4fcefb233f9b271bf41db619fa2 *R/binPeaks-functions.R
4fd548b6a80994826d588c94f6f15255 *R/calculateLabelPositions-methods.R
a818d929e95042af6d2371225c85febe *R/calibrateIntensity-functions.R
814c016cad379a43b12b1d2e2b63169d *R/calibrateIntensity-methods.R
2ae28c142a361a49a5a8537a20aefbb4 *R/colMedians-functions.R
c43206c144c0be9440845eb8f4fb5bd4 *R/constructor-functions.R
c4a18d7bdb1abe861f826ae14b3273f5 *R/deprecated-functions.R
62ba782eb19470f55152b771107b6181 *R/detectPeaks-methods.R
aa9b760b3084cb7df96cda35ae029f3d *R/determineWarpingFunctions-functions.R
b948d3182c93ec9b740f6a6da0942a78 *R/doByLabels-functions.R
e1730f2ac142dc175128bbc0ae282c52 *R/estimateBaseline-functions.R
c1c9ab6bbb61a50127da142b705a2fce *R/estimateBaseline-methods.R
2684cbfefe32be4a10c321f6d50eadd3 *R/estimateNoise-functions.R
15cf2cfd04160686ecbf2ae0fd06f8b0 *R/estimateNoise-methods.R
4aec612829572dc1f89efb45c6344e90 *R/filterPeaks-functions.R
2c86eb3543af7d71262ddca2244a3a6f *R/findEmptyMassObjects-functions.R
47976c467937248521dead20bf3ead59 *R/findLocalMaxima-methods.R
73b4a3abb7274e6a61ea9f3d05e10576 *R/grouper-functions.R
c5aab7df34bfb9dfaa2eddf8d01d1fa4 *R/intensity-methods.R
c5a4dce5aba026c4bfa6ec6287299128 *R/intensityMatrix-functions.R
d4f8d194b910778d2089a50d6afb7807 *R/irregular-functions.R
742533f28abb0b0d545024c6d0ccf447 *R/isEmpty-methods.R
ecc4accf68876e94b031734e47bf88c4 *R/isFunctionList-functions.R
0e9bb031d1d928a0803ecba6ad903314 *R/isMassObject-functions.R
59dc12204f8b94298db2e3d593918bb2 *R/isMassObjectList-functions.R
567d03d3d65aef2ffc8a1f15a05c3204 *R/isRegular-methods.R
95efbec8a53a6e08950ddce69c2808de *R/isValidHalfWindowSize-functions.R
d6987dc0cceb070bd22953a46ba97233 *R/labelPeaks-methods.R
3cd0653b5e0799489623f97da9e313ee *R/length-methods.R
b262f628156dec1d1fb54afebd6cfb6c *R/lines-methods.R
9f4ed09eeaf3dee9d02d24e3a00228ac *R/localMaxima-functions.R
fa7cd41a0de21aa57648a28df1d7daa8 *R/mapply-functions.R
bb19c9c548e9b9572153e1ebbf134594 *R/mass-methods.R
88376299712dd24f6d308b1e3c7b1c86 *R/memoryUsage-functions.R
367ed733f7bcbd1529c5f51a6024f743 *R/merge-functions.R
c13f621346282d5e5e89a3bd479d7b2f *R/metaData-methods.R
989a68ca184ab75f35984bfd08e01d98 *R/morphologicalFilter-functions.R
fa547213b2834923c27940ef9a72259d *R/onAttach.R
a2adfd93615e2f8a6561f3fa702dcbc1 *R/plot-methods.R
cbeb782c189077feb1ac39954fee8be6 *R/plotImsSlice-functions.R
7728dd2db0e907263e2b8175835e1548 *R/points-methods.R
5f8fd6ab4cb5e682e13fc3047b46d7df *R/range-functions.R
573b7d3a611c585f7ebddeec5bd8f9e5 *R/referencePeaks-functions.R
245752ead063604eccb2f8a3b040a9e3 *R/removeBaseline-methods.R
30c684b3c6d6f3e02016dff7281d5663 *R/removeEmptyMassObjects-functions.R
200ccbfa5d302193ab284d52a8dfe523 *R/replaceNegativeIntensityValues-functions.R
722bd6c3c1c95a1cf74a88e57a23ac5b *R/show-functions.R
2f6c3bf983a071c2de154caa74cf4a0b *R/show-methods.R
37eedd1fc72e28b324a50db663589a87 *R/smoothIntensity-methods.R
9e1fb858c1c6392bc0be9b0ade55ae05 *R/smoothingFilters-functions.R
27325b6557a06c3ed150139b36410b2f *R/snr-methods.R
fbf45f4951c0f412157a3d765fc0f312 *R/subset-methods.R
99aaf523caa5cd3e75ab8f538c03dad9 *R/textLabelRects-functions.R
5c914fbd3a2dfe840acdf58341b9f171 *R/totalIonCurrent-methods.R
41fbc52dc78b424397895ea6685d3ad2 *R/transformIntensity-methods.R
1ec1871dee0025c04706382bec2c4899 *R/trim-methods.R
61879b605350c6033da9b848478686c0 *R/unlist-functions.R
159d530f9a14154ea407392c38f81648 *R/valid-methods.R
d23b986e1b0c090e1986f124f3302d14 *R/warp-functions.R
ce4cbe14f1870a32bbbbfcaa391cf765 *R/warpingFunction-functions.R
b56be85ea700d1a8ca239bbb6a91f635 *R/which.closest-functions.R
739968aeaaf32c31215e3ca610ded60a *build/vignette.rds
325598b0f8bcbe241bf33882d83b6f85 *data/fiedler2009subset.RData
b1d4b3db5f8a9d68fc4692e30026986e *demo/00Index
cd6a6ad12205a639b80a67a1a5080723 *demo/MALDIquant.R
4a08efdb52ad0c588b42dcae1d85ee0e *demo/baseline.R
9d4b1343695f6eb16b6fec4a8f1a4839 *demo/peaks.R
c250741acaccf4baa0b0f9f3a2d8933f *demo/warping.R
c9360cb1fb38da8fc547d5ad59422b5b *demo/workflow.R
45e944c7928cff18a5275b4dc5ff1288 *inst/CITATION
5bcd1c7abae66e68fe9dc628e5e7324b *inst/doc/MALDIquant-intro.R
1e51473c26e4202ac6b4f6123caba9e1 *inst/doc/MALDIquant-intro.Rnw
919cc9ed4c110dd4c27d29fa8e277c16 *inst/doc/MALDIquant-intro.pdf
a5c69404f469be0bd7808c6a6785edf0 *man/AbstractMassObject-class.Rd
2384c55f0b86a2e8a7742375e7b20c97 *man/MALDIquant-defunct.Rd
dec195bfad53b84d0e1348b6e7114ab6 *man/MALDIquant-deprecated.Rd
5072e6d92f07735028985ec6a6d467a5 *man/MALDIquant-package.Rd
0e055042e38b63ed5f8e03c75eb7e2c7 *man/MassPeaks-class.Rd
ad08ffc779a2cb1a3b644414b580ad60 *man/MassSpectrum-class.Rd
9e6c4b9a6d2a064a80dab68c01e53b4e *man/alignSpectra-functions.Rd
b87732f847957b41854f822f173ddf75 *man/averageMassSpectra-functions.Rd
9b63d08ba73dcb287c3e066140e98fc6 *man/binPeaks-functions.Rd
6bdd68d090e77f338c150f64c5305a2a *man/calibrateIntensity-methods.Rd
69072679c23ff28641931f6f86dddb52 *man/createMassPeaks-functions.Rd
30c86bc22623778724e87f2367a98205 *man/createMassSpectrum-functions.Rd
cc1866bf939ea4ab68a58c728239b850 *man/detectPeaks-methods.Rd
2809c9abb81930d89ee6785480be0aea *man/determineWarpingFunctions-functions.Rd
c9fe76643210d63c330234777cfa027e *man/estimateBaseline-methods.Rd
ba15ac52b921d707033bfdfb6eb5c641 *man/estimateNoise-methods.Rd
e0ba47d418a460fe74d3cb5075bf9466 *man/fiedler2009subset.Rd
96176739bda274f169e7ba912ed5f4e7 *man/filterPeaks-functions.Rd
f82c0d14f1d7a8cada86047e1f0c172a *man/findEmptyMassObjects-functions.Rd
f31570cdc5df5a721d535678734b91e0 *man/intensityMatrix-functions.Rd
a0ad3cf98d26953dd93aa84eb4bf8298 *man/isMassObject-functions.Rd
c11136206258d7b34948bca285f7e927 *man/isMassObjectList-functions.Rd
58d8b213280ef916e8f1956034918ec6 *man/labelPeaks-methods.Rd
1fb31f987f3d4a1b39425259e971d662 *man/mergeMassPeaks-functions.Rd
127b101c355f5695531f3baf058adfe9 *man/plot-methods.Rd
3031d6500b95d01fd2110ecccb9d2f9e *man/plotImsSlice-functions.Rd
7a2c17178b10d9c4da8ed91a8e02e412 *man/referencePeaks-functions.Rd
df4c229652db2c917647e02faf33f8f8 *man/removeBaseline-methods.Rd
1a265fd746eddd3bb6d6427fea26baa0 *man/smoothIntensity-methods.Rd
0d4d7a004bdd7fa3df82c94e586c91fc *man/transformIntensity-methods.Rd
b61504c144cb9f3b4610cb6a561420bf *man/trim-methods.Rd
3335acf9348d90477fd2e6bcbdefad27 *man/warp-functions.Rd
38415d834917f303276bbfc4ae7af2c6 *src/MALDIquant.h
60981e9053676a37966435e95997ab2b *src/colMedians.c
9d8576241a46e84acc556ccc59312276 *src/init.c
cba6341e3fdbd1473fe19a992bff7b83 *src/localMaxima.c
799aabe8a7dc75123a0e9e958812c93b *src/lowerConvexHull.c
4f18e4c44f85c307d03c64d2dbdd1b98 *src/morphologicalFilters.c
d584865ba73e0280e156279f76a77d25 *src/snip.c
912144481b4c12b9881702c42f4ad11a *tests/testthat.R
932fef0296403876c254af44d1111c54 *tests/testthat/test_approxfun-methods.R
16a99e421049f72f5f55027f63eea2c4 *tests/testthat/test_as.matrix-functions.R
6190f4bc3eba28a0bc2a1deef66ad37f *tests/testthat/test_as.matrix-methods.R
d320c9127a2f11b8d04d4cc9283c1bb5 *tests/testthat/test_averageMassSpectra-functions.R
d513f8c0a0167cf60386efcafd6138e1 *tests/testthat/test_binPeaks-functions.R
7f59bd9a93b716d2f70b41fa8cd670d0 *tests/testthat/test_calibrateIntensity-methods.R
6ab3507a99d7bdc1f8dde8b85ca42857 *tests/testthat/test_colMedians-functions.R
d43f596aaaf41ff670bd1c8f5375c6ba *tests/testthat/test_constructor-functions.R
7cd10c04b2aaa60229562441172e8c09 *tests/testthat/test_deprecated-functons.R
b94b7d40be1a2c85171fa5b73447d73f *tests/testthat/test_detectPeaks-methods.R
5c088a86280ef99c885685babcc7ab18 *tests/testthat/test_determineWarpingFunctions-functions.R
34a9dae5130a2fd94ddbd5b436559d65 *tests/testthat/test_doByLabel-functions.R
4b01a48c362bd286853e9c46c6ab1652 *tests/testthat/test_estimateBaseline-methods.R
e310a5998e9e3706a82348ac9e4d1841 *tests/testthat/test_estimateNoise-methods.R
01f20533d0cf0f2df4d95acf46d57be4 *tests/testthat/test_filterPeaks-functions.R
37ce987d248c073119231c0d94098112 *tests/testthat/test_findEmptyMassObjects-functions.R
f6ab8ca435902df81a693a91a1787173 *tests/testthat/test_findLocalMaximaLogical-methods.R
54edc8be527b360fe1f0bdc839666f52 *tests/testthat/test_grouper-functions.R
4249736cf2705a5d7262520fcce5fd0f *tests/testthat/test_intensity-methods.R
2aa015214ef211ea444d7556009e270b *tests/testthat/test_intensityMatrix-functions.R
4280b30f805619983542ef41fe0ddaf4 *tests/testthat/test_irregular-functions.R
aa13cd831e9082ec01d0fa6669112a8f *tests/testthat/test_isEmpty-methods.R
039cbd41e8a2db1ab24ffa2041fc80cf *tests/testthat/test_isMassObject-functions.R
9edba7830c5c0804514173de766e0278 *tests/testthat/test_isMassObjectList-functions.R
1463d5d936a582a0e41298237df175df *tests/testthat/test_isRegular-methods.R
b7b96289ddcac4ebdd7b0d9031c80516 *tests/testthat/test_length-methods.R
8b4183165aabf58d0f746ac9f0943173 *tests/testthat/test_localMaxima-functions.R
3e700401011b7fa7d84d83d551fa67d5 *tests/testthat/test_mapply-functions.R
253f03d93fd5144e4f187c1aef111adb *tests/testthat/test_mass-methods.R
9a42fa3bdd4ed63c9ea5567d98944ff3 *tests/testthat/test_merge-functions.R
49b8024fbe1066b5c68c2d079f5aba87 *tests/testthat/test_metaData-methods.R
daf9c7d9f789cc928d0992769f6cefde *tests/testthat/test_morphologicalFilter-functions.R
f3fe9d288ee8367c256c90525abf3715 *tests/testthat/test_range-functions.R
0af5408a284ab5a166f06973f1996b05 *tests/testthat/test_referencePeaks-functions.R
689a72a9a7ab394f532d22f14010c291 *tests/testthat/test_removeBaseline-methods.R
813815527b6e591b215e065e7422dad0 *tests/testthat/test_removeEmptyMassObjects-functions.R
399cb71acb1570fcdc4d42104f3de431 *tests/testthat/test_replaceNegativeIntensityValues.R
438abeff349258bef816b030b88c3973 *tests/testthat/test_show-methods.R
18638ca5fa1de8193606c2ba8bbdc26a *tests/testthat/test_smoothIntensity-methods.R
69ea5740165c32cc7cf9234bd9281f5d *tests/testthat/test_smoothingFilters-functions.R
52e2e182222dc5453228cee39eeaa080 *tests/testthat/test_snr-methods.R
2c71f06b573ac902c3116f1525a152d2 *tests/testthat/test_subset-methods.R
f4165a0b842c0d27088905a2112936fe *tests/testthat/test_totalIonCurrent-methods.R
889d6c146789933c18d4f4ab9d011308 *tests/testthat/test_transformIntensity-methods.R
15c9290850d46f88abd30e8de3d0c449 *tests/testthat/test_trim-methods.R
189b492b9effdf126522989fbc96f885 *tests/testthat/test_unlist-functions.R
ae8363f7a15c7b4a1c4eaa7fd3faf3b7 *tests/testthat/test_warp-functions.R
b9b096e283b034935a4592a2e8ca31eb *tests/testthat/test_warpingFunctions-functions.R
628aab1ffb1146aec4c2ef89812e9174 *tests/testthat/test_which.closest-functions.R
1e51473c26e4202ac6b4f6123caba9e1 *vignettes/MALDIquant-intro.Rnw
5edaa50005ab2be6fc5d907017773026 *vignettes/bibliography.bib
