942783550bfc9a7bc3690ab7427526ad *DESCRIPTION
82ad9a6cfd622fdb4e95538ae2c97e7d *NAMESPACE
adf4b28806313d104b763e510e258158 *R/as.dframe.R
b5d39b5024f58cc2e768b99bb50377c5 *R/cbindFiles.R
a07d168ab0b48159df17dacb1a1c5456 *R/coef.haplin.R
b96703c7a3784e4cc12b67a193d472f1 *R/coef.haptable.R
303c2cd05ae56908714eded999da18ce *R/coef.tri.glm.R
1050650cbf86ea51585eb2c771db3489 *R/convertPed.R
212cb8a330951692bb9cca21a35aa5e0 *R/dframe.R
b307d916b5a9d4d39176b31ab561ee86 *R/dumpTab.R
767dbba85e8b48b881e53a0e923769a9 *R/f.EM.missing.R
f1d97555501cff0ef5013b0137d84519 *R/f.HWE.R
581fb8a8acfbe627c0f104c1eb165908 *R/f.HWE.design.R
6170ba4c845e98920db93fd3ad7ca973 *R/f.QQconf.R
74fc50f3b45a77232253bd4f6a1e7571 *R/f.Rplot.R
a23d12db0c35b81a5d42d736f92444f0 *R/f.aggregate.R
c099b79bc3a709026e521a24fbf8f6d4 *R/f.args.from.info.R
1fa9cd7d09cd8d3408bf536eafa7b1fe *R/f.bdiag.R
d866b5a42097ab5780f6eb790348feba *R/f.catch.R
4cd3e77ca3cd4cbb83c1afbd7951282c *R/f.check.pars.R
1ef378ea9655ff0f05d31098b233f04b *R/f.coefnames.R
6a50f6bbae1c15e77b8bd3b15e84252d *R/f.compute.effects.R
76362a661b6810b9b64daf390e011785 *R/f.create.tag.R
513a3b8b78530dd6f12716615f2f08a0 *R/f.data.R
ac0f90c45f4817d1b5d04bec30eccf8f *R/f.data.ready.R
93a9c67dbf189cea2f511bc0b80c20bb *R/f.debug.pvalues.R
2cc93484fc5bc9d76520045ba9a5fd49 *R/f.design.make.R
6a1f96a968e85591636075c63221ccdd *R/f.fill.effects.R
7d4111c14fc2772d1f9fcbb3a5ddab43 *R/f.final.loglike.R
e901704c339b5b074dfd220a8c71834f *R/f.get.data.R
dad071c4699b6f707d2c0cd48d87bcf8 *R/f.get.marker.names.R
2eb0c3c538b5e30c8a405876ca9093e6 *R/f.groupsum.R
cb7724aec632df89e96ca358ee4c4e87 *R/f.hapArg.R
616e196bcdc61422f3eaf83753dec1ed *R/f.hapSim.R
3eed58724767bf28cbf7801b5517fc47 *R/f.hapTests.R
8f074bb5ee197511fed1b74bd17953fb *R/f.haptable.list.R
81757768cdbe639c1ebcf3c3e81a63ea *R/f.jackknife.R
e51e533b5e7a1440b35397c61786cada *R/f.like.ratio.R
ba00a2c2ff6092723de62cb4c0ce4396 *R/f.make.index.R
1dcc2f1c473f6eeac6486629ea084582 *R/f.matrix.to.list.R
a4253990ea263c71cdd6afdb9c09ad7d *R/f.ped.to.mfc.R
8140941f4bfadbc1b7bc5aa08383491b *R/f.plot.effects.R
e8d263e083b68989410c2a7b305a67b8 *R/f.pos.in.grid.R
5a428f346019f2736b245fe68ee7ee92 *R/f.pos.match.R
e61adce10c75a27d19436164261e5b40 *R/f.pos.to.haplocomb.R
2ced4f5f20f91dc00e8ae53c49115718 *R/f.post.chisq.R
da9dda87d3319580099934ef757c6b8f *R/f.post.contrasts.R
83211ffab3973b9d86a20e3c51b7ddbf *R/f.post.diff.R
7251c43180fc489c728bfb562792879c *R/f.post.poo.diff.R
fc17358b33e7db10786843195a079742 *R/f.posttest.R
e13a0266e7cdfa0d1f05947adc058656 *R/f.posttest.score.R
5fc97ae63b5ba4f06122a68f5756e2f5 *R/f.preliminary.freq.R
0bd8dd21970789c18aa7ded4e79281ba *R/f.prep.data.R
e5041939ff9b85393799cc08937fb7ba *R/f.prep.dataout.R
5426c4fb736868bcd359bb8efc1ef3af *R/f.prep.reference.R
c74714a5aa0e0fb89536a0ea635f4cc4 *R/f.printlist.R
a77017b476ee3abe3fc17d760588d2f6 *R/f.prob.R
b7b9b87f84210ba17e2bf7fd89738ebd *R/f.rand.geno.R
23e93cdd151de35bacbebd741daf016a *R/f.read.data.R
58cc64812a19cb1cfb06d63617ec8377 *R/f.redistribute.R
e3789e0fda204ee63022a3223ecdb3f6 *R/f.repl.thin.R
b9337bf8b776514ff63b024954544538 *R/f.scoretest.R
13b27cd5d4d817e4b70ac94e81233cca *R/f.sel.haplos.R
c0df8e6b9f0cc6238a1315fc9083a525 *R/f.sel.markers.R
6754f1e16add24e6db797749190dd3b8 *R/f.sep.data.R
8aaeaf1e35d3bc49133957d0f06025d1 *R/f.sim.R
84ef877950e0c1f4a6c483fdfc1783e4 *R/f.sort.alleles.R
b64799d46938972522fd170099ef606f *R/f.sort.alleles.cc.R
81ca52234f7628bb1078cf25050966a1 *R/f.split.matrix.R
989780e1016a1390a2a153c9e5857fd8 *R/f.split.vector.R
e68bc5875304c03b40b93268a8bb202a *R/f.suest.R
af795484ade8021673639b0bbaf4474e *R/f.tri.glm.R
2d1bfad11539679aa470868aa20404f9 *R/f.var.covar.R
4fe19914e590af4ea691596c3b9f76c1 *R/f.vis.R
2a17c0693dfd5a6ae537110b107ad870 *R/f.windows.R
c37d356ff6fbdf4cc6935aa48e753bf8 *R/gwaaToHaplin.R
fac72dd7eba156e9dc9c097265965979 *R/gxe.R
6aa1d803de3d753066a386240317ca53 *R/hapPower.R
61d2c098632d8cca90336937544ed481 *R/hapRun.R
5e88f785b8c44ba830d03ae908df33ed *R/hapSim.R
25e79ee488ee798d37065a80f02488c8 *R/haplin.R
429cb01a1bd29d8646c5b56ed83c5259 *R/haplinSlide.R
5a56da9ae87c309632ed5e4555f0c6ad *R/haplinStrat.R
b17e1640cebe1ff3fc2189908e6e58ae *R/haptable.R
5ddb177aacbd128a592b9d93196ff7b7 *R/haptable.default.R
cf9f1460a37d82f7de4b93e3903d088e *R/haptable.gxe.R
0b93151c5e8d03cbde3678e3209dab9a *R/haptable.haplin.R
68b3e89d913d225ffb8b950066cdf07c *R/haptable.haplinSlide.R
9eba7c7fc62e439a4a0a8aa31a4d2249 *R/haptable.haplinStrat.R
5e36bacf5707fe2172f67e1a436d6529 *R/lineByLine.R
a77e6bf7450619267209c88a34dafd5f *R/lineConvert.R
7a07adb37ff836238f050dd902267fa4 *R/output.R
67c549d2a2d9a44f20651b01026d7935 *R/pQQ.R
d671ee4362fbe91ecbe2d0e33b102554 *R/pedToHaplin.R
0265606d0c2af84a2db194b96c9f1723 *R/plot.haplin.R
13e52f6c62fb5d116a4155ff838614b1 *R/plot.haptable.R
caec41b03a7f55127c0bbb49ac35c45b *R/postTest.R
38fcd78326722e00e455085838bd11d0 *R/prepPed.R
88beda7affb0862a836e15a2bbd0d99e *R/print.HWE.test.R
4e2e4c9866c3ca10c26319200eefe2c6 *R/print.gxe.R
208d1cb08a503fe2ee4edc6d6e5b56c8 *R/print.haplin.R
e1654eb0f463ec23fafc311e148d1f35 *R/print.haplinSlide.R
3c3e2474d57fceaea396adb7963395d6 *R/print.haplinStrat.R
c2415b9c7fb5d329e514e76210a162fa *R/print.info.R
3e8f8f53e816c6eb7496279f55194b4d *R/print.suest.R
60a9536d343e21366564b1913d3c0578 *R/print.summary.haplin.R
ca24a84c9a984862e79ce621d37f2468 *R/print.summary.tri.glm.R
45a5d5213925cc951cf82f21293e7e0f *R/print.tri.glm.R
af7bc84e516086ac7ccfb78ec7a6f71d *R/rbindFiles.R
4a8cb1e2d2a32b0cbf5487f97814d001 *R/readData.R
771cabb882ce1187fc1b579948f9a2d2 *R/snpPos.R
c969eb6c071c7eed13aa1f018d9ebdf9 *R/snpPower.R
b569685ac66e96388a0127bcc040698e *R/snpSampleSize.R
951872aace0d345f9b7fe4b69c12af82 *R/suest.R
6587110707fbbfd5457979d61405e16e *R/summary.haplin.R
c88df50ed240272ed5d1b793124f0449 *R/summary.haplinStrat.R
7539728369dabb8236464d6403434994 *R/summary.tri.glm.R
6157bd592e940da6e29fa70f1c2899a9 *R/tdt.R
a9e2694040ced0fe7a84d7d35e2b9c50 *R/textlabel.R
f3bfcb53b7047a2aeb1c3b0d5959d878 *R/toDataFrame.R
8f09a81bfc1188eaa2189230c252cb40 *R/uniqueID.R
1a3328a4901ec12c5afa76e0b127ae90 *inst/doc/Haplin_data_format.pdf
f8746084d10f04c720ab221cbb9f5eee *inst/doc/Haplin_power.pdf
c1dd5ca254262f8c2bf35da76baeb768 *inst/doc/index.html
c733db45c77dc3e125dce75350853370 *man/cbindFiles.Rd
480c5fcf9f9afbd48f089b9eaadea9fe *man/convertPed.Rd
c4edcac6f37d9f92f7c1bfc7502d183c *man/gwaaToHaplin.Rd
94bd8d27119d34483158d7d854d5fb6d *man/gxe.Rd
e2728495269c6b959f6097b39a6ecd9f *man/hapPower.Rd
d2b8d0524d155bcc21e1cc6db7a8bd3d *man/hapRun.Rd
360dfcbdb798f635de65c1fe8609c628 *man/hapSim.Rd
6fadeefa9e8e2e53a30a23a462664773 *man/haplin.Rd
d18a47fcc473df562a8b112bb09154fc *man/haplinSlide.Rd
fe2d75e504b2efea5fe8ea509c0a4a15 *man/haplinStrat.Rd
8624e1d1aa73f095dadc92ff512a58c1 *man/haplinTDT.Rd
b9c96552d90b1f1d98099f388dafe0cc *man/haptable.Rd
5f82685ea154db52611cb21b907ee484 *man/lineByLine.Rd
9a66c53d52f307230d2cf3e3b0139cc4 *man/output.Rd
40e00bc9c414b6896b2992c4d54a5934 *man/pQQ.Rd
ade2adf444e53ae6e0bd70728b89360e *man/pedToHaplin.Rd
43a2b0e2a3e611eb5782134271d8dd4b *man/plot.haplin.Rd
b39fe816c173c39564a8ddad4e7324ea *man/plot.haplinTDT.Rd
bb9bd1bcd1544d02a39750a8455b1f73 *man/plot.haptable.Rd
40736e77a6d37a31222e738748fd52e8 *man/prepPed.Rd
891a297343d820483282b39fa2d00687 *man/print.haplin.Rd
1e4461118dcb6b5c552ec3f9d1ee9d31 *man/print.summary.haplin.Rd
035ea9350d6d7e6e9d0bcdc39aff9b2b *man/rbindFiles.Rd
fc552f0f58db93deb4516eccdad3a955 *man/snpPos.Rd
3a982b939eb2db8b9539394aaa32b36e *man/snpPower.Rd
7b1ee01534e981619b4237d9cd5491fc *man/snpSampleSize.Rd
5962a59b0844f7bd68facac3d4d28cd4 *man/suest.Rd
18742003fb6220a1cf9627fda9062d15 *man/summary.haplin.Rd
26bc6146ddb8a14fcc453768d380bca6 *man/summary.haplinTDT.Rd
003908326c3a4093984dde7521cac7da *man/toDataFrame.Rd
