10b690837c23cee2d6a076877fb11d4c *DESCRIPTION
b253e48982f0d611b1cb0e008403e6e7 *LICENSE
72c0ee457b19c1b6a3844cf315e31279 *NAMESPACE
ed19dea288916841a3edb44ac4ffeec8 *NEWS.md
92ce6d48b87f6fce8ee88a54f69487f1 *R/BD_ordinations.R
45a6f381897e9c4ced3b31a1cbec881e *R/BD_shift.R
d9e1bfa0cc94f7c989655705834ced34 *R/DESeq2_l2fc.R
1700a3ee95aea3a3ab70cfad89542e3d *R/HRSIP.R
e111a8d3f8bc24555bfa35106284437f *R/HTSSIP.R
d052ad67de36d3bd29f3c09abc9257b2 *R/HTSSIP_sim.R
847c37a656c40fa578c6b43f3bc87b46 *R/Util.R
cb97b8ba4ce428ea0196282e35517c51 *R/chk.R
99224a4aee63fcfcf1c4cbcfc339a3b9 *R/delta_BD.R
0456ad48d0e2864454038c516330a20a *R/heavy_SIP.R
133999d1da6881beaa31e1de0a06ec89 *R/phyloseq_subset.R
09b1161c8a717806c4d46a744db62ae6 *R/pkg_data.R
9a360189d2bb14f89e71a2582ef89b30 *R/qPCR.R
580315979673812db65046616c12aad6 *R/qSIP_atom_excess.R
4e72a76aa15a8196099e4e121c5b5d2f *R/qSIP_trans.R
3e189ffc1e55768ff421db6487a73414 *R/stringterpolate.R
75823a50779d3ac70f21af8389329d7d *README.md
296189b8fd80e86364487b820354b471 *build/vignette.rds
08be372a73667144d623403341cc5da5 *data/datalist
da6b33ea48561d0fb041f7d05939d484 *data/physeq_S2D1.rda
4400e6225bdf0f29962eaf60a72d5b34 *data/physeq_S2D1_l.rda
3a8b3aefd30f7e6ffdb4a068c0802555 *data/physeq_S2D2.rda
a4c14c1da00db30c3d0da7462d95eb62 *data/physeq_S2D2_l.rda
d3855d85b5916ffeb9cbe42aa11d20b4 *data/physeq_rep3.rda
e198403801fc4caebc9dec08e0928028 *data/physeq_rep3_qPCR.rda
246ff462bea07697a69de7aab102d94d *inst/CITATION
8ee2923d4d2f8875320a131d8a5c33cc *inst/doc/BD_shifts.R
3795b2d487827e32ad72e25f60af3320 *inst/doc/BD_shifts.Rmd
f32c144f84c4c4fe83e561518d94d377 *inst/doc/BD_shifts.html
9390a728e1f579fb225a523fa20f2e05 *inst/doc/HTSSIP_intro.R
d4355346324b931990ede4475a0bb33f *inst/doc/HTSSIP_intro.Rmd
dd3561d3edc308268b891099a2f521e7 *inst/doc/HTSSIP_intro.html
3b7ecaad5fb085c2dddd83a0a23fefc2 *inst/doc/HTSSIP_sim.R
605d0f4fc625546b534207d47aa0aedc *inst/doc/HTSSIP_sim.Rmd
9bae3c1714f3468a409559b460695da9 *inst/doc/HTSSIP_sim.html
3623571ca95019c82b2533ed2fc97c9e *inst/doc/MW_HR_SIP.R
6872fd1ca3daadb3355f64632156005a *inst/doc/MW_HR_SIP.Rmd
bdaca13fccd29e2c101f39a7647787d9 *inst/doc/MW_HR_SIP.html
7a7250d57f423defae4f0f8924b8b99c *inst/doc/beta_diversity_ordinations.R
b5e1c913dadd4744f16776d29e423335 *inst/doc/beta_diversity_ordinations.Rmd
cd7341ef8f00f33504852616d206b6e6 *inst/doc/beta_diversity_ordinations.html
0b7de8ac8c39230a0c70a02d694b420b *inst/doc/heavy_SIP.R
0ba5fe9c6ef8fa209519a24afcff52fc *inst/doc/heavy_SIP.Rmd
39a70f42dcf8a8ca6f6912342e8e642b *inst/doc/heavy_SIP.html
e7a4849517ba0fb4abe157cfac94e4b1 *inst/doc/qSIP.R
ff9202b88592f4efe8d76afd814533a3 *inst/doc/qSIP.Rmd
a00feb385781b26e6bd9cec196dd24de *inst/doc/qSIP.html
04b287c45b2d74342332d174d90bf23a *inst/doc/quant_incorp.R
57c2c22c907b67018f9b41215019a760 *inst/doc/quant_incorp.Rmd
634c1c21fe5c5c6ecfe3a962f6652e7e *inst/doc/quant_incorp.html
ee276553d89258df52b0225730e9cbfb *man/BD_shift.Rd
9a80aa8654e338bc4a55a9531fc75eb0 *man/DESeq2_l2fc.Rd
0243536fc6ea1a9f332abb63b4359cee *man/HRSIP.Rd
3d10e540e6dfcf0660d5eb6c39e13789 *man/HTSSIP.Rd
0c9a87150a618e512f990a044596f486 *man/HTSSIP_sim.Rd
e5c3aa360f96437ab5e7ebdb229336db *man/OTU_qPCR_trans.Rd
e4d95bb3708a933c943e66f85150b340 *man/SIP_betaDiv_ord.Rd
ccdbec2e29d86d35eb6fb7eb7f1f97fb *man/as.Num.Rd
a6302779400b5478bcc05b3def0c9dd6 *man/calc_Gi.Rd
436f3a2953ef0ff1986cf01fff566f47 *man/calc_Mheavymax.Rd
129b8dc76cc1db0a9e777b36f7ee4d79 *man/calc_atom_excess.Rd
259170eb4fa0eef4fe88c3d46569b879 *man/data-physeq_S2D1.Rd
7fbc4c6864fed4f386b8785ba10091dd *man/data-physeq_S2D1_l.Rd
a75e206331270da5923c60e9c4154384 *man/data-physeq_S2D2.Rd
6f5d2b4e35186d9188fc9dbaa5e21cdd *man/data-physeq_S2D2_l.Rd
50221c7f34f308783ecaff0f762fc45e *man/data-physeq_rep3.Rd
6731cc7af701cb9c85b423ce52c8c79a *man/data-physeq_rep3_qPCR.Rd
da53c18a6a2e3b363c3efb581b1b8ff4 *man/delta_BD.Rd
06352da2f4201ed3181d09ac53e365e7 *man/evaluate_matches.Rd
3477c8ef41e456ece08ab12a80a1a7a3 *man/expr_param_extract.Rd
793bb6d5652a3dd3228d8d67c4a2fb82 *man/extract_expressions.Rd
fe3cffe1dba47056aef95445ba9e18b1 *man/extract_formats.Rd
23eb92ac32a714bba2121175f69a4b26 *man/filter_l2fc.Rd
98066f748744ecaf5b00376aa690fc23 *man/format_metadata.Rd
ef8af55a86b089ead2b19fe5ad4f56a8 *man/fraction_overlap.Rd
a7e6586671f544e27d0e4181fe2328ca *man/get_treatment_params.Rd
1f14ce2be741c699e952a9ed533a6768 *man/gradient_sim.Rd
52997012ce9f2a266bfbe9d57c07dbf6 *man/heavy_SIP.Rd
79786db714f29cc015e02e98c3a73cee *man/match_brace.Rd
001f47dd1da9fdcfc6d1a4a8bb4a583f *man/match_placeholders.Rd
8a8bfca6b5ec901fbeb5f63771d0520f *man/max_BD_range.Rd
48795f2996476205e8aa837017133c1a *man/overlap_wmean_dist.Rd
c1bf985d5f22f6e7690a5e8784879219 *man/parse_dist.Rd
2f858c609493c72d39a9b4f66ab3d322 *man/perc_overlap.Rd
3bd53de10d0fc2941ddbd25d1016fe08 *man/phyloseq2df.Rd
3211ee36a06093ea9a24322e0c89f97f *man/phyloseq2table.Rd
f56429bd5b8c85e59f6402ce0c6c9daa *man/phyloseq_list_ord_dfs.Rd
3a4e582275fc601ef524a94098fb954e *man/phyloseq_ord_plot.Rd
5423bf67dfa1674b3b218d63029bb5e2 *man/phyloseq_subset.Rd
8a5dc7c8f36b34690b733007a95bf4ed *man/physeq_format.Rd
86779d9802a46857663345cd3323ce72 *man/physeq_list_betaDiv.Rd
7cc38cf164f3177a3c51364c2069a1c1 *man/physeq_list_ord.Rd
54a5b372cbe673866bf81ce82dad4ccf *man/qPCR_sim.Rd
bab945e27ec56a8e8cfe129003b77c13 *man/qSIP_atom_excess.Rd
80f683cf26f83edfd74bf5828c2a6d26 *man/qSIP_atom_excess_format.Rd
710183aa2dd5e0dcdf519240a758dc34 *man/qSIP_bootstrap.Rd
b401bd4ddc3e62444c21d8f2897c6096 *man/stringterpolate.Rd
6f5d3f0eff347d18e2c69dde779111ac *man/tss.Rd
8584b4292dbc04a4366b011c25383634 *tests/testthat.R
19d4dce0c271fe0b0cda6b3c86ae403e *tests/testthat/test-BD_ordinations.R
7bfe93a917ccc6130ab99c461dc0219a *tests/testthat/test-BD_shift.R
edb4077ca4a15aeb5d44b4adede2866b *tests/testthat/test-DESeq2_l2fc.R
1dc23beb373f99fd59b1ed4be4937f26 *tests/testthat/test-HRSIP.R
e12c7b3befb638650731184e8f457f9a *tests/testthat/test-HTSSIP_sim.R
a489f8e4ee4663f15ac43049a9b0c2c3 *tests/testthat/test-Util.R
06dd5cd07fc45a8b4cb460d18d2d8a78 *tests/testthat/test-chk.R
e47c7a733455b8d28772a14352b40d02 *tests/testthat/test-delta_BD.R
2c0a3b0371dc1b2d428a545e03040ba4 *tests/testthat/test-heavy_SIP.R
f46cac3e0746370646374f093900ef4c *tests/testthat/test-phyloseq_subset.R
f8db14565a15d0d07d7bfbedb9b16f34 *tests/testthat/test-qPCR.R
91477b1efc7a52a1e430ff58ef30907e *tests/testthat/test-qSIP_atom_excess.R
e98ec715b4046a9664233a6a62247afd *tests/testthat/test-qSIP_trans.R
9fe9dcf88c2e56f031519546bc91b62d *tests/testthat/test-stringterpolate.R
3795b2d487827e32ad72e25f60af3320 *vignettes/BD_shifts.Rmd
d4355346324b931990ede4475a0bb33f *vignettes/HTSSIP_intro.Rmd
605d0f4fc625546b534207d47aa0aedc *vignettes/HTSSIP_sim.Rmd
6872fd1ca3daadb3355f64632156005a *vignettes/MW_HR_SIP.Rmd
b5e1c913dadd4744f16776d29e423335 *vignettes/beta_diversity_ordinations.Rmd
0ba5fe9c6ef8fa209519a24afcff52fc *vignettes/heavy_SIP.Rmd
ff9202b88592f4efe8d76afd814533a3 *vignettes/qSIP.Rmd
57c2c22c907b67018f9b41215019a760 *vignettes/quant_incorp.Rmd
