5bb9661a146825819fccfdd56948adab *DESCRIPTION
aa1b580a514151cfb9096030a64c10da *LICENSE
ad588c5c9dcebca2e6f3574c1e240ef7 *NAMESPACE
27bbffce42bc05126dde3fe36bec78e6 *NEWS.md
89d41793383a148356ea779e2727ec77 *R/GenomeClass.R
3f1d0cbd3209c4d5f87e087ca427ca71 *R/MetapopulationClass.R
160756b994bff65271836d1307f527fc *R/ModelFunctions.R
3d10034cab583330e44c485d41f60467 *R/MutationMatrixClass.R
152d74896134296f0b4ff00cc305d968 *R/PopulationClass.R
c25b2e48ab310c8bd00bde3eb4096b79 *R/RcppExports.R
cb65fd993af9dceef1206deee1f604b7 *R/SelectionClass.R
ea47fc7ac4694b52cf5827e9032f3a04 *R/ToolFunctions.R
c727b73e6219b0952c3ba84b9108a65b *R/UserFunctions.R
25ce8ac1e2b07f48117b2a98f784c1d1 *build/vignette.rds
f4747f7347c7f170597fd942da50150a *inst/doc/use-the-Ease-package.R
fcbe0e0587e4184ccda581774979a4a3 *inst/doc/use-the-Ease-package.Rmd
fe8ab9b86ff1023f4e8b25c21807e3b2 *inst/doc/use-the-Ease-package.html
202cac652cdf0a90161db3a0c6e8fa36 *man/Genome-class.Rd
6bfca20939d8676884e855aeb9db88e1 *man/IDgenomeGeneration.Rd
a8b89135c45a3fdcc5284817e46158d0 *man/IDgenotypeGeneration.Rd
7e5e584ac03eb7c5aa6e056378ab134a *man/IDhaplotypeGeneration.Rd
28d70c040c95abb865c2a8ca65b2e0ce *man/METAPOP_SIMULATION.Rd
17f4bf2f524ccb9725c8a71562c17962 *man/Metapopulation-class.Rd
02635401b8073316e9a61ab3208916ea *man/MutationMatrix-class.Rd
b4d797bd1e8cd65d4655b03cb2cda399 *man/Population-class.Rd
9db29ca5320029b26d4fd187af8c0303 *man/Selection-class.Rd
21725efffb29f0d735218f40044cbc0d *man/alleleFreqMatGeneration.Rd
bb5f1fd00bcc2c09cd77178f7bee0a80 *man/areThereHomoz.Rd
fabc1940b78efc749b8aba337db62955 *man/catn.Rd
2853cad8c6b5dc7dbe72841221827c22 *man/check.genome.Rd
d190b41a42f3ec6d48d1527ecd03c5a1 *man/check.metapopulation.Rd
9ed70b96951e3c17a0b08eb7fba574ff *man/check.mutationMatrix.Rd
1d4b35891c269aea17a8d884d31b8f9d *man/check.population.Rd
f30ecb5a8efc93e78dd1af3cc7473d8a *man/check.selection.Rd
1209df2ddbb6006c104a8447a83a34bf *man/extractAlleleComb.Rd
14c49578648a0e3587a721a9147b4178 *man/genotyping.Rd
bf151050d6cd341ce5fe182b7f8036ff *man/getCustomOutput.Rd
71b92737a312b545c3d51cacc1f4ce14 *man/getRecords.Rd
66abc70d3afd60b28815985924e8d3b5 *man/getResults.Rd
3cc5722e2a9a9cd51c53fe9b63fe3fac *man/haploCrossMatrix.Rd
c665922f178eae90c4664b33b732ddbc *man/haplotyping.Rd
747d8458870c37def9d1b7baf66b286a *man/initialize-Genome-method.Rd
6526d290379f0da41a0ee8f22fda8925 *man/initialize-Metapopulation-method.Rd
5c33ab14f974b590d4bb59809eba7a56 *man/initialize-MutationMatrix-method.Rd
c54c93bd456d305b3eb8a240634d65a6 *man/initialize-Population-method.Rd
3f719c104783e57f44ae7492a4946f4f *man/initialize-Selection-method.Rd
00ea87ea2d26d84167c758f0806dfa72 *man/is.correct.transition.matrix.Rd
1b8adc2595b1e5f3b35a4a60450248e2 *man/is.default.matrix.Rd
ec458998a64f9b062da78db70698df21 *man/is.probability.matrix.Rd
63529d131ffaf964a338d8357378916b *man/isAffected.Rd
0353e8c4cb98304db922e2da40a1fe6c *man/isHaploSelectFormula.Rd
83a561b2488b1e1bf5df4694d20f2890 *man/listing.Rd
40e795919dfd04864aecaf4d929cbd2b *man/meiosisMatrix.Rd
91a9fcec36bfeef90fd7a5cddd38cfee *man/mutMatFriendly.Rd
9b1ecababa1e15372511926742f866bf *man/mutMatRates.Rd
068b55c6ed4775e0a6a2115293ab833a *man/mutation.Rd
b6ba95de52e7480036a7e12347185613 *man/outFunct.Rd
20d2f7534522d48c12f5223137a3abf1 *man/print-Genome-method.Rd
329fbe5004ca9d84ab9a93ee4c3e9b7f *man/print-Metapopulation-method.Rd
c4c575126cc459ff36f7e49e88e05b47 *man/print-MutationMatrix-method.Rd
0592d5564f3ae0f3e21795cdc8b93a06 *man/print-Population-method.Rd
6e90ea7e236e9644aef72bb06779c4c9 *man/print-Selection-method.Rd
3634b5be97409c0c23e14dfc49ca9c0c *man/recombinationMatrix.Rd
57d6b99e600f42dc6c9c310362feade0 *man/rowResultGen.Rd
3a0934e2370d310250e5b2e35655e6d6 *man/selectFormIntoVect.Rd
b934425df1714957c249f5bb8e1c05df *man/selectInputTreatment.Rd
b123edd9a757c98842648a968237c0ab *man/selection.form.treatment.Rd
cbb2c4db7b04d3913f3a7c00bcc2bc6b *man/setGenome.Rd
f8e92d75f7d1a0707f086a90b2601a0a *man/setMetapopulation.Rd
6af3c2de636e1a849411809406efacf0 *man/setMutationMatrix.Rd
858202f4236c4e3a90667032c4a9fb60 *man/setPopulation.Rd
07cf0c6ebac7cf9257372c70364bb6ff *man/setSelectNeutral.Rd
2af224a259429cfef50660b55c19be61 *man/setSelectOnGametes.Rd
fb68f70473047bc99601e24ee94b97c6 *man/setSelectOnGametesProd.Rd
7b21beb1c711a9eaee44bba33b595869 *man/setSelectOnInds.Rd
1f1be301d74414519b6ebd28602abfca *man/show-Genome-method.Rd
9bb44c33dfea25c9f98d1a1681dd0de0 *man/show-Metapopulation-method.Rd
0bea1a2ecf080b344d6735e7f4ec46ae *man/show-MutationMatrix-method.Rd
87fcff3175e4a32f05ad9265eb10e888 *man/show-Population-method.Rd
d644bbdec379fd165465b5d11b2445fc *man/show-Selection-method.Rd
4c287e97a0c076beaa10351e936f9d08 *man/simulate-Metapopulation-method.Rd
9b0344f32bb0a40ba2f47262487a48c2 *man/whichHomoz.Rd
0ab9bf0ae9ec72acf87cda35eddfcb53 *src/Ease_cpp.cpp
48ede89ba13d3bd9ada8e74418ddb5e5 *src/RcppExports.cpp
94501654b2cfe3aedf50dd6ced03be65 *tests/testthat.R
e0459a7e2d6f7f9eed8a16e493772f60 *tests/testthat/testGenome.R
fcbe0e0587e4184ccda581774979a4a3 *vignettes/use-the-Ease-package.Rmd
