Type: Package
Package: DR.SC
Title: Joint Dimension Reduction and Spatial Clustering
Version: 2.5
Date: 2022-02-06
Authors@R: 
    c(person(given = "Wei",
             family = "Liu",
             role = c("aut", "cre"),
             email = "wei.liu@duke-nus.edu.sg"),
      person(given = "Xingjie",
             family = "Shi",
             role = "aut"),
      person(given = "Jin",
             family = "Liu",
             role = "aut"))
Author: Wei Liu [aut, cre],
  Xingjie Shi [aut],
  Jin Liu [aut]
Maintainer: Wei Liu <wei.liu@duke-nus.edu.sg>
Description: Joint dimension reduction and spatial clustering is conducted for
    Single-cell RNA sequencing and spatial transcriptomics data, and more details can be referred to 
    Wei Liu, Xu Liao, Xiang Zhou, Shijie Shi and Jin Liu. (2021) <doi:10.1101/2021.12.25.474153>. It is not only computationally efficient and scalable to the sample size increment, but also is capable of choosing the smoothness parameter and the number of clusters as well.
License: GPL-3
Depends: parallel, spatstat.geom, R (>= 4.0.0)
Imports: CompQuadForm, cowplot, ggplot2, GiRaF, MASS, Matrix, mclust,
        methods, purrr, S4Vectors, RColorBrewer, Rcpp (>= 1.0.5),
        Seurat, stats
Suggests: knitr, rmarkdown
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
Encoding: UTF-8
NeedsCompilation: yes
RoxygenNote: 7.1.1
Packaged: 2022-02-06 02:46:16 UTC; Liuxianju
Repository: CRAN
Date/Publication: 2022-02-06 03:20:02 UTC
