Type: Package
Package: DR.SC
Title: Joint Dimension Reduction and Spatial Clustering
Version: 2.3
Date: 2021-11-19
Authors@R: 
    c(person(given = "Wei",
             family = "Liu",
             role = c("aut", "cre"),
             email = "wei.liu@duke-nus.edu.sg"),
      person(given = "Xingjie",
             family = "Shi",
             role = "aut"),
      person(given = "Jin",
             family = "Liu",
             role = "aut"))
Author: Wei Liu [aut, cre],
  Xingjie Shi [aut],
  Jin Liu [aut]
Maintainer: Wei Liu <wei.liu@duke-nus.edu.sg>
Description: Joint dimension reduction and spatial clustering is conducted for
    Single-cell RNA sequencing and spatial transcriptomics data, and more details can be referred to 
    Yi Yang, Xingjie Shi, Wei Liu et al. (2021) <doi:10.1101/2021.06.05.447181>. It is not only computationally efficient and scalable to the sample size increment, but also is capable of choosing the smoothness parameter and the number of clusters as well.
License: GPL-3
Depends: parallel, spatstat.geom, R (>= 4.0.0)
Imports: CompQuadForm, cowplot, ggplot2, GiRaF, MASS, Matrix, mclust,
        methods, purrr, RColorBrewer, Rcpp (>= 1.0.5), Seurat, stats
Suggests: knitr, rmarkdown
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
Encoding: UTF-8
NeedsCompilation: yes
RoxygenNote: 7.1.1
Packaged: 2021-11-19 13:30:58 UTC; Liuxianju
Repository: CRAN
Date/Publication: 2021-11-21 16:10:17 UTC
