citHeader("To cite the package 'CONOR' in publications, please use two or more of the following.")

citEntry(header="For the package itself, or for a comparison of different normalization methods, please cite:",
	entry="article",
	title="Empirical comparison of cross-platform normalization methods for gene expression data",
	author=personList(as.person("Jason Rudy"),as.person("Faramarz Valafar")),
	journal="BMC Bioinformatics",
	year="In progress",
	textVersion="@article{,
  title = {Empirical comparison of cross-platform normalization methods for gene expression data},
  author = {Jason Rudy and Faramarz Valafar},
  journal = {BMC Bioinformatics},
  year = {In progress},
}")

citEntry(header="For the distran method, please cite:",
	entry="Article",
	title="Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes",
	author=personList(as.person("H Jiang"),as.person("Y Deng"),as.person("H Chen"),as.person("L Tao"),as.person("Q Sha")),
	journal="BMC Bioinformatics",
	year="2004",
	volume="5",
	pages="81",
	textVersion="@Article{,
  title = {Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes},
  author = {H Jiang and Y Deng and H Chen and L Tao and Q Sha},
  journal = {BMC Bioinformatics},
  year = {2004},
  volume = {5},
  pages = {81},
}")

citEntry(header="For the dwd method, please cite:",
	entry="article",
	title="Adjustment of systematic microarray data biases",
	author=personList(as.person("M Benito"),as.person("J Parker"),as.person("Q Du"),as.person("J Wu"),as.person("D Xiang"),as.person("CM Perou"),as.person("JS Marron")),
	journal="Bioinformatics",
	year="2004",
	volume="20",
	pages="105",
	textVersion="@article{,
  title = {Adjustment of systematic microarray data biases},
  author = {M Benito and J Parker and Q Du and J Wu and D Xiang and CM Perou and JS Marron},
  journal = {Bioinformatics},
  year = {2004},
  volume = {20},
  pages = {105},
}")

citEntry(header="For the eb method, please cite:",
	entry="article",
	title="Adjusting batch effects in microarray expression data using empirical Bayes methods",
	author=personList(as.person("W Johnson"),as.person("C Li"),as.person("A Rabinovic")),
	journal="Biostatistics",
	year="2007",
	volume="8",
	number="1",
	pages="118",
	textVersion="@article{,
  title = {Adjusting batch effects in microarray expression data using empirical Bayes methods},
  author = {W Johnson and C Li and A Rabinovic},
  journal = {Biostatistics},
  year = {2007},
  volume = {8},
  number = {1},
  pages = {118},
}")

citEntry(header="For the gq method, please cite:",
	entry="article",
	title="WebArrayDB: cross-platform microarray data analysis and public data repository",
	author=personList(as.person("XQ Xia"),as.person("M Mcclelland"),as.person("A Porwollik"),as.person("W Song"),as.person("X Cong"),as.person("Y Wang")),
	journal="Bioinformatics",
	year="2009",
	volume="25",
	number="18",
	pages="2425",
	textVersion="@article{,
  title = {WebArrayDB: cross-platform microarray data analysis and public data repository},
  author = {XQ Xia and M Mcclelland and A Porwollik and W Song and X Cong and Y Wang},
  journal = {Bioinformatics},
  year = {2009},
  volume = {25},
  number = {18},
  pages = {2425},
}")

citEntry(header="For the mrs or qd method, please cite:",
	entry="article",
	title="Cross-platform analysis of cancer microarray data improves gene expression based classification of phenotypes",
	author=personList(as.person("P Warnat"),as.person("R Eils"),as.person("B Brors")),
	journal="BMC Bioinformatics",
	year="2005",
	volume="6",
	pages="265",
	textVersion="@article{,
  title = {Cross-platform analysis of cancer microarray data improves gene expression based classification of phenotypes},
  author = {P Warnat and R Eils and B Brors},
  journal = {BMC Bioinformatics},
  year = {2005},
  volume = {6},
  pages = {265},
}")



citEntry(header="For the nordi method, please cite:",
	entry="article",
	title="GenMiner: mining informative association rules from genomic data",
	author=personList(as.person("R Martinez"),as.person("C Pasquier"),as.person("N Pasquier")),
	journal="Proceeding of the IEEE International Conference on Bioinformatics and Biomedicine",
	year="2007",
	volume="1",
	pages="15",
	textVersion="@article{,
  title = {GenMiner: mining informative association rules from genomic data},
  author = {R Martinez and C Pasquier and N Pasquier},
  journal = {Proceeding of the IEEE International Conference on Bioinformatics and Biomedicine},
  year = {2007},
  volume = {1},
  pages = {15},
}")

citEntry(header="For the qn method, please cite:",
	entry="article",
	title="A comparison of normalization methods for high density oligonucleotide array data based on variance and bias",
	author=personList(as.person("BM Bolstad"),as.person("RA Irizarry"),as.person("M Astrand"),as.person("TP Speed")),
	journal="Bioinformatics",
	year="2003",
	volume="19",
	number="2",
	pages="185",
	textVersion="@article{,
  title = {A comparison of normalization methods for high density oligonucleotide array data based on variance and bias},
  author = {BM Bolstad and RA Irizarry and M Astrand and TP Speed},
  journal = {Bioinformatics},
  year = {2003},
  volume = {19},
  number = {2},
  pages = {185},
}")

citEntry(header="For the xpn method, please cite:",
	entry="article",
	title="Merging two gene-expression studies via cross-platform normalization",
	author=personList(as.person("AA Shabalin"),as.person("H Tjelmeland"),as.person("C Fan"),as.person("CM Perou"),as.person("AB Nobel")),
	journal="Bioinformatics",
	year="2008",
	volume="24",
	number="9",
	pages="1154",
	textVersion="@article{,
  title = {Merging two gene-expression studies via cross-platform normalization},
  author = {AA Shabalin and H Tjelmeland and C Fan and CM Perou and AB Nobel},
  journal = {Bioinformatics},
  year = {2008},
  volume = {24},
  number = {9},
  pages = {1154},
}")


