765b8548bf5eba2c15ca611993530cab *DESCRIPTION
78824439b99f593fea3a7f96b525b22b *NAMESPACE
dc408bbd88bba72bc48353d809ad950f *R/get_edge.R
b1f0e0f83b44d306edbe040d88dd6dea *R/plot.pplace.R
b5d64e51fc8148658f95afe7ff54ed55 *R/pplace_to_matrix.R
816dad7bddd5b098ecf3f53a056c4b39 *R/pplace_to_table.R
54ef481c8c19acbccad516624f17abf8 *R/pplace_to_taxonomy.R
3e51bafecfce81a715a2bd036e62b77a *R/print.jplace.R
36555c9bee11075c7567d062ca03e5ee *R/print.pdb.R
30b4103f6a17c1b8e4032e804367c4db *R/print.pplace.R
277176492e6f5ca0a177d1f73b12aec3 *R/read_jplace.R
e660a73fe3f40257c2d774f7bcd0f481 *R/read_pdb.R
a7f6828ab9a8e7e44ac8f6cf579871b7 *R/read_sqlite.R
c5834ea7bc7170794cb473167c9d1135 *R/refpkg.R
8a29f8eb93ec0b18595f3cf53789b76f *R/sub_pplace.R
edb9bce42bd5bda5d9812d15ac7d5968 *build/partial.rdb
b2e88231f8cedbc95bf40d82c501b1fd *build/vignette.rds
b63915cb61a6a5cc3c574d43bcc26303 *data/pplace.rda
db562c52045ce1b56f1fe4de16a7a11c *inst/doc/bossa-analysis.R
aad40a02a9c2876a5bdd6989bc5e7296 *inst/doc/bossa-analysis.Rmd
787d7ea6b94a4a38452059f7b1ff1f2d *inst/doc/bossa-analysis.html
198276999873a73250adbba20484d0b4 *inst/doc/bossa-refpkg.R
6151cfcecdb75793627909862225ca37 *inst/doc/bossa-refpkg.Rmd
dd138b3456f37a2e9cc20cc5193ade1b *inst/doc/bossa-refpkg.html
1ad3ba7f636ee9637863934852e73f0f *inst/extdata/1L2M.pdb
51434ae00a391e0dd09491e905a84b5a *inst/extdata/example.jplace
27ec70f7f4cd9769ad0beb627b933073 *inst/extdata/example.refpkg/CONTENTS.json
c4bf3ff828ae750f586405e9398cd204 *inst/extdata/example.refpkg/RAxML_result.bv_refs_aln
a37f8688ef7521de97a8b99f409da232 *inst/extdata/example.refpkg/bv_refdata.csv
e2eb55294651fcac5f05d1541bfd4e17 *inst/extdata/example.refpkg/tax_table.csv
1a769f520838353a600f19ad877b40b9 *inst/extdata/example.sqlite
d0d5e3a13b6beb83e0be984fd65b348e *inst/extdata/polerovirus.refpkg/CONTENTS.json
0f509a99f1bd2ca5c245a4a3290f4847 *inst/extdata/polerovirus.refpkg/polerovirus_ROOTED.tre
aaece50c671f2d34cab7116b86d28af1 *inst/extdata/polerovirus.refpkg/polerovirus_info.csv
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus.refpkg/polerovirus_taxonomy.csv
1f4b508654d8291005d24e98a33c1db7 *inst/extdata/polerovirus_from_genbank_MAFFT.tre
307a074ec3d1427a5dcddf4b61db0000 *inst/extdata/polerovirus_taxonomy.csv
318798aacd73e154c2fe4b9fbf16e602 *man/BoSSA-package.Rd
8c8c6d89a4b12ede6ee369a8047132d3 *man/plot.pplace.Rd
b6cdf0e2b985a1dbd954a693b608b9d7 *man/pplace.Rd
b2fec302e2641a26bc2cb76e467ee3a3 *man/pplace_to_matrix.Rd
479710482c39a227d7603cca40b83eb2 *man/pplace_to_table.Rd
7d1fc74813f9b4d8e94647ae6e9eb67a *man/pplace_to_taxonomy.Rd
f9d46ef6b7958dbd49ee941018b55abb *man/print.pdb.Rd
ae82e62b42a132204eb782fe55f4e1a2 *man/print.pplace.Rd
d9b05da8b27944ed9357bb6e54391d1b *man/read_jplace.Rd
1d20356c70c94547f4ae64f7c45db297 *man/read_pdb.Rd
e68e1c8bf42996ba7df15d46e6b84599 *man/read_sqlite.Rd
49feeed148a4971e3f981817b5df22c1 *man/refpkg.Rd
a374594e056930a16e4e6ade48d01cb4 *man/sub_pplace.Rd
aad40a02a9c2876a5bdd6989bc5e7296 *vignettes/bossa-analysis.Rmd
6151cfcecdb75793627909862225ca37 *vignettes/bossa-refpkg.Rmd
