 useDynLib(BayHap)

  export(
   autocorr,  
   bayhapFreq,    
   bayhapReg,
   BIC,  
   conv.test,        
   correl,
   haplo.prior,
   plotReg,
   plotFreq,  
   plotACF,
   plotDensity,   
   plotRmean,       
   plotTrace,
   setupData  
 )


S3method(print,reg) 
S3method(print,freq) 

import("boa")

#hidden functions

#  allele 
#  allele.names 
#  chain.import 
#  boa.plot.acf.ad 
#  genotype 
#  genotypeOrder 
#  expectedGenotypes 
#  haplo.list       
#  haplo.list.all 
#  haplo.pairs      
#  import 
#  is.genotype
#  is.locus
#  is.snp
#  make.dummies 
#  survival
#  combinations 
#  permutations 


