analyze2nifti           Create a NIFTI file from an Analyze file
centering               centering
cluster.threshold       Cluster threshold an array.
cov.est                 Estimates the covariance between neighbouring
                        voxels
diminfo2fps             diminfo2fps
EC.3D                   Expected Euler Characteristic for a 3D Random
                        Field
eigenvalues             eigenvalues
f.analyze.file.summary
                        prints summary of .img file contents
f.analyzeFMRI.gui       starts AnalyzeFMRI GUI
f.basic.hdr.list.create
                        creates basic .hdr list in ANALYZE format
f.basic.hdr.nifti.list.create
                        creates basic .hdr list in NIFTI format
f.complete.hdr.nifti.list.create
                        creates complete .hdr list in NIFTI format
f.ica.fmri              Applies Spatial ICA (Independent Component
                        Analysis) to fMRI datasets
f.ica.fmri.gui          tcltk GUI to apply ICA to fMRI datasets
f.icast.fmri            Applies Spatial or Temporal ICA (Independent
                        Component Analysis) to fMRI NIFTI datasets
f.icast.fmri.gui        tcltk GUI to apply Spatial or Temporal ICA to
                        fMRI NIFTI datasets
f.nifti.file.summary    prints summary of .img file contents
f.plot.ica.fmri         Plots a specified component from the output of
                        f.ica.fmri
f.plot.ica.fmri.jpg     Plot the components of the ouput of f.ica.fmri
                        to a series of jpeg files
f.plot.volume.gui       tcltk GUI to display FMRI or MRI images
f.read.analyze.header   read Analyze header file
f.read.analyze.slice    read one slice from a .img file
f.read.analyze.slice.at.all.timepoints
                        reads a slice at all time points from a .img
                        file
f.read.analyze.tpt      Read in a volume at one time point
f.read.analyze.ts       read in one voxel time series
f.read.analyze.volume   read whole .img file
f.read.header           read ANALYZE or NIFTI header file
f.read.nifti.header     read Nifti header file
f.read.nifti.slice      read one slice from a .img or .nii file in
                        NIFTI format
f.read.nifti.slice.at.all.timepoints
                        reads a slice at all time points from a NIFTI
                        .img or .nii file
f.read.nifti.tpt        Read in a volume at one time point
f.read.nifti.ts         read in one voxel time series
f.read.nifti.volume     read whole image file
f.read.volume           read whole image file
f.spectral.summary      plots graphical summary of spectral properties
                        of an fMRI dataset
f.spectral.summary.nifti
                        plots graphical summary of spectral properties
                        of an fMRI dataset
f.write.analyze         writes an array to a .img/.hdr pair in ANALYZE
                        format
f.write.array.to.img.2bytes
                        write array of 2 byte integers
f.write.array.to.img.8bit
                        write array of 1 byte integers
f.write.array.to.img.float
                        write array of 4 byte floats
f.write.list.to.hdr     writes a .hdr file in ANALYZE format
f.write.list.to.hdr.nifti
                        writes a .hdr file in NITI format
f.write.nifti           writes an array to a .img/.hdr pair in NIFTI
                        format or to a .nii file
f.write.nii.array.to.img.2bytes
                        write array of 2 byte integers and add at the
                        begining of the file the NIFTI header part
f.write.nii.array.to.img.8bit
                        write array of 1 byte integers and add at the
                        begining of the file the NIFTI header part
f.write.nii.array.to.img.float
                        write array of 4 byte floats and add at the
                        begining of the file the NIFTI header part
fourDto2D               fourDto2D
fps2diminfo             fps2diminfo
GaussSmoothArray        Spatially smooth an array with Gaussian kernel.
GaussSmoothKernel       Calculates a discrete Gaussian smoothing
                        kernel.
ICAspat                 ICAspat
ICAtemp                 ICAtemp
ijk2xyz                 ijk2xyz
magicfield              Get magicfield from the header of an image file
mat34.to.TRSZ           Affine 4x4 (or 3x4) matrix to Translation,
                        Rotation, Shear and Scale
mat34.to.TZSR           Affine 4x4 (or 3x4) matrix to Translation,
                        Scale, Shear and Rotation
model.2.cov.func        Calculates covariance from Hartvig Model 2
model.2.est.gamma       Estimate gamma for Model 2 of Hartvig and
                        Jensen (2000)
N2G                     Fits the N2G model
N2G.Class.Probability   Posterior Probabilities for N2G model
N2G.Density             Calculates the density function for the N2G
                        model
N2G.Fit                 Optimzation function for N2G model
N2G.Inverse             Transform parameters of N2G model back to their
                        real domains
N2G.Likelihood          Calculates the (negative) Likelihood of the N2G
                        model
N2G.Likelihood.Ratio    N2G Likelihood Ratio's
N2G.Region              N2G Normal component interval
N2G.Spatial.Mixture     fMRI Spatial Mixture Modelling
N2G.Transform           Transform parameters of N2G model so as to lie
                        on the real line.
nifti.quatern.to.mat44
                        Quaternion (etc..) to affine 4x4 matrix
NonLinearSmoothArray    Non-linear spatial smmothing of 3D and 4D
                        arrays.
Q2R                     Quaternion to rotation
R2Q                     Rotation to quaternion
reduction               reduction
Sim.3D.GammaRF          Simulate Gamma distributed Random Field
Sim.3D.GRF              Simulate a GRF
SmoothEst               Estimate the variance-covariance matrix of a
                        Gaussian random field
st2xyzt                 st2xyzt
threeDto4D              threeDto4D
Threshold.Bonferroni    Calculates Bonferroni Threshold
Threshold.FDR           False Discovery Rate (FDR) Threshold
Threshold.RF            Random Field Theory Thersholds.
twoDto4D                twoDto4D
xyz2ijk                 xyz2ijk
xyzt2st                 xyzt2st
