a39f2196426d5f3b63166be660d463a9 *DESCRIPTION
b108136dec8d5a8779168f01999d01f2 *NAMESPACE
a3977f17b45dd648ae813be23fe17d0d *R/AlignStat.R
c892130279bef71779ca014c802bb219 *R/Plots.R
ab54df72804425c76efd183af1cde87a *R/RcppExports.R
d7bcbfe476438a43de79df4f429fba8b *R/compare_alignments.R
21b74b8f675d58d7d963db1909aa165e *R/data.R
e350d96193e7cc993ca023be2f9cee8e *README.md
f30cd7f7cce6df6abea2b2f8a44d56e5 *data/comparison_alignment.rda
5b4b9a75205f119a0a267a221d9a3b55 *data/reference_alignment.rda
25848f869aaf0088a0d748f735b70688 *man/AlignStat.Rd
e2267568f2153135e2f2d74217c40518 *man/compare_alignments.Rd
5bd9a84b11e5718306c3a964ee8ec5e6 *man/comparison_alignment.Rd
b756ec77f2c4f6e5ef0f2f367aea02a0 *man/plot_dissimilarity_matrix.Rd
4e4115073376cacf7b062b70c37e80a4 *man/plot_dissimilarity_summary.Rd
3a1952aab4fdb08be3badb8b032ab44c *man/plot_similarity_heatmap.Rd
cf4f3df37a0a41c93801954d1c5bfaa1 *man/plot_similarity_summary.Rd
c262a146cddb4d85119c2374d5952dc4 *man/reference_alignment.Rd
702801f3a532e509162cbecd86a2c12a *src/RcppExports.cpp
8b54f25aa029ca6d7ff6d65e15f00b80 *src/rcpp_align.cpp
b981b1c3a741c1c6b675333c367e2971 *tests/testthat.R
8d5f7dd9b509ff781bfb489b17f18222 *tests/testthat/categories.rda
97cd460315a591df2e922d103f098c29 *tests/testthat/means.rda
fd7afcd214624f0b465f0b3aa4f58325 *tests/testthat/prepared_com.rda
8c653e89258dfd9879334ee8a1ba8cfd *tests/testthat/prepared_ref.rda
8c653e89258dfd9879334ee8a1ba8cfd *tests/testthat/prprepared_ref.rda
6ffad74d959d82bc271731f65df1bd2b *tests/testthat/results.rda
25672de86838e8ef89dfaeb9f17b4317 *tests/testthat/test-align.R
