--------------------------------------------------------------------------------
scape 1.0-7
24 Oct 2005
--------------------------------------------------------------------------------
o plotIndex() returns trellis object or data frame, as documented.




--------------------------------------------------------------------------------
scape 1.0-6
19 Oct 2005
--------------------------------------------------------------------------------
o importCol.Rd, x.cod.Rd, x.ling.Rd, x.oreo.Rd, and x.sbw.Rd point to
  scape-package help page.




--------------------------------------------------------------------------------
scape 1.0-5
18 Oct 2005
--------------------------------------------------------------------------------
o scape-package.Rd gives an overview of the package. Other help pages revised.

o importCol() makes importRes obsolete.

o plot* arguments shortened: 'log.transform'->'log', 'base.log'->'base', and
  'plot.it'->'plot'.

o plotIndex() and plotLA() default y-axis limits extend 4% beyond data extremes,
  except lower limit is zero when values are not log-transformed.




--------------------------------------------------------------------------------
scape 1.0-4
02 Sep 2005
--------------------------------------------------------------------------------
o plotN() argument 'axes' is documented.




--------------------------------------------------------------------------------
scape 1.0-3
01 Sep 2005
--------------------------------------------------------------------------------
o importRes() example works.




--------------------------------------------------------------------------------
scape 1.0-2
28 Aug 2005
--------------------------------------------------------------------------------
o plotIndex() and plotN() default arguments are identical in documentation and
  in functions.




--------------------------------------------------------------------------------
scape 1.0-1
26 Aug 2005
--------------------------------------------------------------------------------
o plotB(), plotCA(), plotCL(), plotIndex(), and plotN() have a single default
  argument for argument 'what'.

o plotIndex() redundant argument 'fitted.also' removed, pass lty.lines=0 to
  suppress fitted lines.

o plotCA() and plotCL() argument 'fitted.also' shortened to 'fit'.

o Examples spell out TRUE and FALSE.




--------------------------------------------------------------------------------
scape 1.0-0
25 Aug 2005
--------------------------------------------------------------------------------
o Graphical arguments standardized and vectorized further.

o Submitted to CRAN.




--------------------------------------------------------------------------------
scape 0.2-2
24 Aug 2005
--------------------------------------------------------------------------------
o Directories reorganized according to CRAN specifications.

o man directory contains Rd documentation files.

o importRes() imports both survey and commercial selectivity.

o Survey and Gear columns renamed to Series, in scape elements CAc, CAs, CLc,
  CLs, and Sel.

o plotCA() and plotCL() assume what="s" was intended if what="c" failed.

o plotSel() supports 'together'.

o Graphical arguments standardized further between plot functions.

o CHANGES entries reformatted.




--------------------------------------------------------------------------------
scape 0.2-1
17 Aug 2005
--------------------------------------------------------------------------------
o plotB() supports three plot types ("d", "s", and "l") and 'cex.legend'.

o plotN() supports 'ratio.bars'.

o example directory contains example files (cod.res, l_at_age.dat, ling.res,
  oreo.res, oreo.txt, sbw.res).

o Documentation updated by adding DSC proceedings paper to scape/doc directory,
  and removing obsolete text files.




--------------------------------------------------------------------------------
scape 0.2-0
10 Aug 2005
--------------------------------------------------------------------------------
o plotB() plots biomass trajectories, landings, and stock recruitment.

o plotCA(), plotCL(), and plotIndex() assume first series by default.

o plotLA() supports 'together'.

o importRes() brands attributes call=[call] and scape.version=[version] for
  imported Coleraine models. The info attribute is now empty quotes.

o importRes() imports CPUE data without a Gear column. Series name can contain
  the gear name if the user wishes.

o scape element B has column Year, not Years.

o Graphical arguments changed in all plot functions, to simplify and
  standardize.

o ling.res and ling.R updated to a newer version of Coleraine.




--------------------------------------------------------------------------------
scape 0.1-7
09 Nov 2004
--------------------------------------------------------------------------------
o plotIndex() makes plotCPUE() and plotSurvey() obsolete.

o importRes() supports gear-specific vulnerable biomass, and labels annual Dev
  elements with years instead of cohorts.

o ling.R does not contain CLs element, since survey catch-at-length data were
  not used in that assessment.




--------------------------------------------------------------------------------
scape 0.1-6
26 Jul 2004
--------------------------------------------------------------------------------
o plotSelMat() renamed to plotSel(), supporting gear-specific plots.

o scape element SelMat renamed to Sel, with a new Gear column.

o importRes() makes sure that CPUE element will not contain empty Gear:Series
  combinations.

o data directory contains additional files ling.R and ling.res.

o DESCRIPTION typos fixed.




--------------------------------------------------------------------------------
scape 0.1-5
24 May 2004
--------------------------------------------------------------------------------
o  Updated documentation (1_introduction.txt, 2_walkthrough.txt, 3_mymodel.txt,
   4_trellis, and 5_upcoming.txt).

o  plotCPUE() and plotSurvey() have improved multipanel layout control, using
   'as.table' instead of 'rev.series'.

o  plotCPUE() and plotSurvey() have improved grid lines at low values.




--------------------------------------------------------------------------------
scape 0.1-4
23 May 2004
--------------------------------------------------------------------------------
o plotCPUE() and plotSurvey() argument 'div' renamed to 'q' to clarify its
  purpose.

o plotCPUE() and plotSurvey() internal arguments 'yobs' and 'yfit' do not cause
  a conflict with top-level argument abbreviation 'fit'.

o plotSelMat has default cex.points value 1.

o importRes() suppresses getLA-specific warnings.

o plotCPUE() and plotSurvey() display more informative strip labels.

o plotCPUE(), plotLA(), and plotSurvey() support argument 'fitted.also'.

o importRes() looks for correctly spelled Number_of_survey_C@A flag.

o x.cod contains CAs element.

o Documentation updated (2_walkthrough.txt).

o importRes() calculates maturity without NaN values.




--------------------------------------------------------------------------------
scape 0.1-3
19 May 2004
--------------------------------------------------------------------------------
o Documentation updated (1_introduction.txt and 2_walkthrough.txt).




--------------------------------------------------------------------------------
scape 0.1-2
18 May 2004
--------------------------------------------------------------------------------
o doc directory contains 1_introduction.txt, 2_walkthrough.txt, and
  3_upcoming.txt.

o data directory contains Coleraine output files (cod.res, l_at_age.txt,
  oreo.res, oreo.txt, and sbw.res).

o plotN() makes smarter y-axis.

o importRes() brands attributes class="scape" and info=[path] for imported
  Coleraine models.

o Removed importCor(), plotB(), and plotPearsonCLc() from package.

o CHANGES file in root.




--------------------------------------------------------------------------------
scape 0.1-1
12 May 2004
--------------------------------------------------------------------------------
o DESCRIPTION and INDEX files in root.

o data directory contains cod.R, oreo.R, and sbw.R.

o Uploaded to personal website for first time.




--------------------------------------------------------------------------------
scape 0.1-0
11 May 2004
--------------------------------------------------------------------------------
o R directory contains scape.R: importCor(), importRes(), plotB(), plotCA(),
  plotCL(), plotCPUE(), plotLA(), plotN(), plotPearsonCLc(), plotSelMat(), and
  plotSurvey().
