2c72e56f71bbb9aa1995f7296ab11398 *DESCRIPTION
566ca1f33208b273825550bf37e4b352 *NAMESPACE
11ffb4c4d295ecfde842b1788c46f63f *R/assignLinkageGroups.R
36fceb47f24f5628556df5ccd3cb6ad5 *R/checks.r
bc58c35dc55c3e6f471aeff9b37dbbda *R/cross.denovo.r
5ae9edf3827472c372c4111956b3cd9d *R/cross.saturate.R
e71a2518d59b28b887ae4585e2e5840d *R/fakePopulation.r
a26024a77fe4b7f2321a02388233847d *R/find.mixups.r
c3170bf5e3cca94376265e7c7fc20b9d *R/findDiffExpressed.r
7ca7f8f2d48af5880fc2491c73b29199 *R/generate.biomarkers.r
c0e8ea315b08c62680c09303a68804fb *R/genotypesToCross.r
4b5d6e3851e671608267e33600e35975 *R/intoPopulation.r
9fd87f1159ae03ca1ab1f011f577b584 *R/map.functions.r
73345f2a79098560bb81dc6612298747 *R/markerPlacementPlot.R
79b2bc7f001392db83f1aa13ea5c3b92 *R/markersCorPlot.r
a25b825c5caa866cff0192f4c1c06599 *R/plotMapComparison.r
ce4c9765bf5df16dd8130b9f3f3392b9 *R/plotingRoutines.r
d58c07be3af6900c8396ed318abe8f84 *R/postprocessing.r
882a5d30901b25e4767645c9172cc05e *R/read.population.r
b11459db3de0b42598dd434e32793c88 *R/smooth.geno.r
7dadcafd83314b7d26a0e3737475e6fa *R/utilities.r
f1cf559aca60b434a2db033a96b49e39 *README.md
8a05a5031b4d8f45e137119c2aa59909 *data/datalist
a86247fded6f7af997706810bdfa6de2 *data/yeastCross.rda
642c934120a14503651092a7ee952470 *data/yeastPopulation.rda
13cac3de174a3449230190f25932c177 *inst/BUGS.txt
6b6f02efe0fd42aef7f4e8c5089b602a *inst/CITATION
4850a80ef658952849306ba82c066a20 *inst/TODO.txt
15e1e51045f7d3bd3ef946599b3c265a *man/RPpval.rd
1495724ad5929d560d5cf74a1c4a2458 *man/assignedChrToMarkers.rd
a19b6b67b2cb89e105303c2faa9a1c58 *man/changeChromNumber.rd
4d17d4487c68fb74eb0eab257b4a1b1c *man/createPopulation.rd
f97302049ac476ecb305018e1bcd4d66 *man/cross.denovo.rd
a39c5afed673b5ccf52ead3de4d80387 *man/cross.saturate.rd
18753c758d69d4abaafc223a4dd020b2 *man/fakePopulation.rd
7c42fc2e71dd45eb5bdd01b213e377f7 *man/find.mixups.rd
bf4064b0281ecdd6fe8122918d6c758b *man/findDiffExpressed.rd
31dea04d01063b7fc7b2844d2a7599e3 *man/generateBiomarkers.rd
e06cb427dfc2840bd0b22ebb7b2b4965 *man/intoPopulation.rd
5a825d57e169b5727ae17806bcdba683 *man/map.functions.rd
efc3010001198069226fc2f905e432e2 *man/markerPlacementPlot.rd
1e4f6bc083a7ceb4284eb03a955440bd *man/markersCorPlot.rd
6d76af86f01c714fdf68c6a8d077aa4c *man/phenotypes2genotypes-internal.rd
ab39a47563a3c2de3e88cffc3a205ff3 *man/phenotypes2genotypes-package.rd
9f626369fad78258238b8fe14cadd32d *man/plotChildrenExpression.rd
8b1c03bb7453853d4b817b43238c2cac *man/plotMapComparison.rd
2018af05c706eeddd8b344fc8e8db935 *man/plotMarkerDistribution.rd
69d4b6b6bdaec87ff2e61ba979e92153 *man/plotParentalExpression.rd
f50ca069854b315aa30aa73d7017823c *man/projectOldMarkers.rd
b7abcfb2f87c40b0ce30dbcfa40d2540 *man/pull.biomarkers.rd
e03da6fca39b2de746634d8835814750 *man/read.population.rd
e713f9e09ba3365a1fec4bcee2e923b2 *man/removeIndividuals.rd
f95d4f56aa8dc3ff390915f02fffbec8 *man/reorganizeMarkersWithin.rd
51e5fcc40558f462d2981d9540960be4 *man/scanQTLs.rd
4223479cdc3b1988f89bb2d805affb5a *man/set.geno.from.cross.rd
d4cfc9010899709ac22a1019ab17a3b1 *man/smooth.geno.rd
772dc7252131e713716403bb40630eb5 *man/write.population.rd
9a0f1d4eefbfff6f88a5f791e080c6a9 *man/yeastCross.rd
8d5891a065ca2b510aea529363767054 *man/yeastPopulation.rd
d3e87f4702a52f51d400e07d223802b8 *tests/genotypes.csv
7f2eaa77e8dbe35f5aebcd4303bdc14d *tests/map.csv
6a2a06b2f77b6255d522443607680750 *tests/offspring_phenotypes.csv
6e4101faf879fb66d32a48a2c33ee982 *tests/parental_phenotypes.csv
d457a570fcd950df782839c9f31bbeef *tests/test_analysis.R
