1e1056bbc741c17bf9c85e380a7f81a9 *DESCRIPTION
e031a1063808baaabca84863c4685b3d *LICENSE
2520f49f889a9aeaf5cd77677f8dafac *NAMESPACE
31448c5437a7bf152d65c0d95907871f *R/atlas.R
70b57b816e049672971b3698e011a46b *R/brainview_magick.R
2f388151e8e4484c8704804a794afeff *R/cbar.R
bb37fb45b3afc3f9cbcf8685d8cc0b77 *R/cbar_magick.R
267db68e0fa8fb3c5caa215b1bdb80ad *R/coloredmesh.R
74819f4781cff32e276c2d8077c9b41d *R/export.R
d562e73fa193c147efbfe80f723f6f05 *R/fsdir_abstraction_group.R
3bdb41d43c470cadc1af0e6cdc79fe58 *R/fsdir_abstraction_subject.R
781b981d8ba696e4979fe012ea0e20bb *R/helpers.R
a842b8edc3365aac5d6d5bf666fdca35 *R/metadata_io.R
54809218a82e69315e5e02fda0b8eaad *R/morph_agg.R
7014e0c70776831fb3992328bf2fc629 *R/morph_atlas_agg.R
e1cbb68937bdbef66410504574ed26b6 *R/morph_concat.R
e472a902788f98a1cbcf86837cb7ae44 *R/optdata.R
b47c515ce36363e3229b964a46cbc907 *R/seg_stats.R
f7c313427b21c0d287aa881940fe2246 *R/tmp_volrotate.R
1c454748ccc49daafe6032c818891d5b *R/vis.R
8d233a58c5579fe26b01aff10abc1392 *R/vis_meshes.R
779564e53ae5c1960d1348f9dd3c870a *R/vis_multiview.R
d0eb67e384105c16a68dd88cd3f639df *R/vis_surface_background.R
ffeb4b271b8b472a4de419859a34e348 *R/vis_volume.R
038221d532d148c63951c3f0e5b0cf20 *R/vis_volume_3d.R
4e3605c6e14a5a879fe9bbb5edd6d8b4 *R/volume.R
11e9b309f8c00958ed8b9753caf6392d *build/vignette.rds
d67273819a896961d1d3c138e22061b1 *inst/doc/fsbrain.R
33311436f4efb5e08e4e07f1db7b19f2 *inst/doc/fsbrain.Rmd
6dd1ce3cecf774f7a228caaafb9f8ece *inst/doc/fsbrain.html
a2d098c055dfd9fa4a05fcd9c7b46a8d *inst/doc/fsbrain_faq.R
6ec3f95cad310f5f632f90de1e517798 *inst/doc/fsbrain_faq.Rmd
5c10cea0391ebad83bf2c2ab5e043a93 *inst/doc/fsbrain_faq.html
3d881c9f93bd2e2bce8bc5ab23baa427 *inst/doc/fsbrain_vol.R
bf012995ec69a1dcd9c61bb2523d6269 *inst/doc/fsbrain_vol.Rmd
dfe0df89580746a96fa375b41eea7acd *inst/doc/fsbrain_vol.html
f5fbdf9bf40946c4601b575a2bd2c38a *inst/extdata/demographics.tsv
3f9ffc41aa46c9989147faccad388fd4 *inst/extdata/lh.clusters_fsaverage.mgz
6e9c23e3e65077a32a4e92ab71206043 *inst/extdata/lh.thickness.gz
62f405d2676f3f34e551e5bda7cb3d34 *inst/extdata/rh.clusters_fsaverage.mgz
b37629ac4df5decc802e6244f4f0fe98 *inst/extdata/subjects.txt
e46148f6f93ccbe02cfc036d4937e2b0 *man/alphablend.Rd
54ad9eaf2fb3988c8620de7da87a5129 *man/annot.outline.Rd
0090d8ca36390542ed6853e2b9d956f3 *man/apply.label.to.morphdata.Rd
a7f80c386e2fa2eff84bdcdf8e89aae8 *man/apply.labeldata.to.morphdata.Rd
132d3bc2f7ea5e4d18e143753ecac3bb *man/apply.transform.Rd
b79b62028a900c7b6edfb5fa829aefa7 *man/arrange.brainview.images.Rd
b8391a0f2a8f3b0ae3e4b2246670cfd8 *man/boxcoords.from.bbox.Rd
fb702ab60701e7f67fd6335697bb5cf2 *man/brainview.sd.Rd
7ceecc81d5be08a38d80b571f5a24a5d *man/brainview.si.Rd
e5354c1554d26bf24323be55665d6f2f *man/brainview.sr.Rd
e6f70e4a8b8da3b3abfed309d80cd61c *man/brainview.t4.Rd
d18550624d28759ec0f473af6f0043d3 *man/brainview.t9.Rd
990c40745e31779e1391a1ff67fa8851 *man/brainviews.Rd
7e1da6e304397e0e9dd6e19115ad8c20 *man/clip.data.Rd
d4358c08b6263cb181d827458c55e7a5 *man/collayer.bg.Rd
41071ee15b5600bffc785a9a2c75ab4b *man/collayer.bg.atlas.Rd
6e3d84da5abcf2f582e0646a88ea924a *man/collayer.bg.meancurv.Rd
c681620398fd5be1c03f2af8a0f04fa6 *man/collayer.bg.sulc.Rd
03ee25aa9408038a9703e3c82eadc08f *man/collayer.from.annot.Rd
ba2cfe42603bdcd33833c7fca37d1093 *man/collayer.from.annotdata.Rd
282df96e9cd5d2d3dfd0049f7bbeecfe *man/collayer.from.mask.data.Rd
5abe8b2bcde62d1ef7e0549487f375d3 *man/collayer.from.morphlike.data.Rd
7ad4495b27f1716c2630cc229c313a93 *man/collayers.merge.Rd
e43e371449060c9d578a2314fe9c2fb5 *man/coloredmesh.from.annot.Rd
654a838b44f33461d82f62da0a48f646 *man/coloredmesh.from.color.Rd
bfa969a1229436a35f5805c8022fbe93 *man/coloredmesh.from.label.Rd
e94bd8191eb92f15e766fc529b0e284d *man/coloredmesh.from.mask.Rd
354b622c62a62f5f4b49f76794342314 *man/coloredmesh.from.morph.native.Rd
901543e92b1a23196d051987bfa7f739 *man/coloredmesh.from.morph.standard.Rd
57e0e852fd8730b61b24fe6828680d2e *man/coloredmesh.from.morphdata.Rd
1577d4adacfd607ec5839b6879ccc93c *man/coloredmesh.plot.colorbar.separate.Rd
cd16e64645d0e75f8e43795d20d1b2eb *man/coloredmeshes.combined.cmap.Rd
fe7473d2cfc34028c263a8c1c48d55f6 *man/coloredmeshes.combined.cmap.sorted.Rd
32074a1f314364d022b38e7f37883089 *man/coloredmeshes.combined.colors.Rd
48cdf04d19cdbcfbe7e887e588e93081 *man/coloredmeshes.combined.data.range.Rd
a0a381ac61afd1e5abb5afd7c7f49672 *man/coloredmeshes.from.color.Rd
c52e15cff9c9313967bfe617c9fa16d9 *man/colorlist.brain.clusters.Rd
5558bfdb83f515118a94205935a9c965 *man/combine.colorbar.with.brainview.animation.Rd
70f14fc1d05cb10a3159bfb12d709b76 *man/combine.colorbar.with.brainview.image.Rd
3b987003e95f2219a0b1f367f61ac9a3 *man/cube3D.tris.Rd
89881d94cdfaaa59691f6666d4d7dade *man/cubes3D.tris.Rd
b39aec07b4b55c8d7f2f6a607142da04 *man/delete_all_optional_data.Rd
2080f66f10b72033e5fec6310bf35832 *man/desaturate.Rd
e7dd15415182b61e4b3fd10b844d677b *man/download_fsaverage.Rd
83a31a93244ad2e27fe98f2f125f40b0 *man/download_optional_data.Rd
255d217198eac32c2f505a232b2e0dd5 *man/draw.colorbar.Rd
dbab7ddab0b1d2de85224ff57ac724d7 *man/export.coloredmesh.ply.Rd
e65d1b8796aad01269014073eedc0595 *man/face.edges.Rd
47bf31a3ce81add975486bcba0e0a21d *man/find.freesurferhome.Rd
745aec10172239c59ca4638195e9dac8 *man/find.subjectsdir.of.Rd
a253a378b299c26fb909d4fd37db70ae *man/flip2D.Rd
b3e4bec31d605c3e1267555b0b13161e *man/fs.coloredmesh.Rd
bdcdc1e68a9ace1319b7f0722e60b5ec *man/fs.value.list.from.agg.res.Rd
57b0eb03e2e1ae7a060fc3b1d9eee7b2 *man/fsbrain.renderable.Rd
80dced53f6ac9fcdf33306a69fa6f54b *man/fup.Rd
e83fb0f74bd53d9d393336acc8a5d907 *man/get.atlas.region.names.Rd
829419720e35c9746a597364742c922f *man/get.rglstyle.Rd
654f29cb0b8900ea4f71153bb5ea12f8 *man/get.rglstyle.default.Rd
777c0d8fcca36d3bf65a5694c62d626d *man/get.rglstyle.parameters.Rd
d4beb2850fe6ed2e3f8895e60b7ed755 *man/get.rglstyle.semitransparent.Rd
c5d17a0eae768a3a52bb7972e178ecf0 *man/get.rglstyle.shiny.Rd
254f1908c13f704ad3a26c78321ba32b *man/get.slice.indices.Rd
f2e066fac72ff77c5bce6ac79f3c3243 *man/get.view.angle.names.Rd
b342994b7a44af94f83db03ff09d5588 *man/getIn.Rd
5a4c111abb8ba91fac6468208ed77142 *man/get_optional_data_filepath.Rd
448671ed79480e0f48156338888a88ed *man/group.agg.atlas.native.Rd
11da72bab17fb41345ac72da2559b88a *man/group.agg.atlas.standard.Rd
7a976e5a977f41f5e1a16bcd9bd73be9 *man/group.annot.Rd
aeb0af3881622a79a3cfaa7103fc65f1 *man/group.concat.measures.native.Rd
6f9820c00741d4cc63574165efb9ecaa *man/group.concat.measures.standard.Rd
98ffdea60acd527c65379ae35a300857 *man/group.label.Rd
c245e629eec772a9460693a15a8bd9f8 *man/group.label.from.annot.Rd
9d9af2e07844fcd5e568679dcfbce7cf *man/group.morph.agg.native.Rd
11144134872f8ea333b9b63fa7048262 *man/group.morph.agg.standard.Rd
2a160dab7164c855c4172c6312f7eacd *man/group.morph.native.Rd
1b4209a8a47b68caa6bb3c9a50cddb4d *man/group.morph.standard.Rd
f0f61958c9a995409ecd1e66d2b53f7c *man/group.multimorph.agg.native.Rd
e8e1f5a0c702d30c6310414c7a82fbb3 *man/group.multimorph.agg.standard.Rd
d95ffd59c6fbbea8b3ecc5967a124315 *man/hasIn.Rd
4d3ee2f6f6b534617ac22f4c51380949 *man/hemi.lobe.labels.Rd
6ea727805f069943fa3641e782b3c083 *man/hemilist.derive.hemi.Rd
b5cf615dbdeace3e0dc125bc40e505a9 *man/hemilist.get.combined.data.Rd
a3eefd2d553473e7ce0fe3b26e6b6ea4 *man/hemilist.unwrap.Rd
589632e9c6dc4ce2f83737e226eea461 *man/hemilist.wrap.Rd
109e723ed7f10fd80198b69c015f1ef1 *man/hull.retain.along.axis.Rd
72ef94b6d9e7e6ca0732a0e587e6a247 *man/is.Triangles3D.Rd
af5e936e8d01a934eb370153fe9ab229 *man/is.fs.coloredmesh.Rd
aa870bfc510e5d4a5fe49fa06760422d *man/is.fs.coloredvoxels.Rd
26141cb35a1543bc05063a9f79892d43 *man/is.hemilist.Rd
e8a56c5f2ff1b53fee68b2c568b7fa67 *man/label.border.Rd
a93e154363e1b307daabd99033196de0 *man/label.colFn.Rd
a45bf00964b32a109b872eec4e323490 *man/label.colFn.inv.Rd
80fdd6311437becfa75ee948db5a368d *man/label.from.annotdata.Rd
3c3b3e92a952952a731622f1d16c7877 *man/label.to.annot.Rd
238b60a4340dcef504bf61e77472a913 *man/labeldata.from.mask.Rd
6b9ae46e6d1076594519329238f27483 *man/list_optional_data.Rd
121d79c3134b5a892fe8dbbef534d0d8 *man/magick.grid.Rd
0fb601411e26a90994a186edece7ef5a *man/makecmakeopts.merge.Rd
a2b9128acd19f690a134db28c1e36c64 *man/mask.from.labeldata.for.hemi.Rd
5d8f6a9254406462779ac981235fc0f4 *man/merge.hemi.annots.Rd
4f5ab149831f6f42b3d91ac94063ad92 *man/mesh.vertex.included.faces.Rd
18c7b08cfd9af4fa46eff9f2b553b33f *man/mesh.vertex.neighbors.Rd
1243d00c750da5852ef6163a866983fb *man/normalize.Rd
666bd1ba3c48b79662d1a21c34a36adf *man/perform.na.mapping.Rd
39cf95756aad467f245448b6ea18b6b7 *man/perform.rglactions.Rd
1f853f5c44a097dce57e36264d49b7d2 *man/plot.fsbrain.colorbar.Rd
cae9162f6f2aede4401a4c6ad79450eb *man/print.fs.coloredmesh.Rd
8dfdfaf2c1671e033dda32469d811729 *man/print.fs.coloredvoxels.Rd
f17c953dab6669d6747271334dee014f *man/qc.from.segstats.table.Rd
dec5466799bcc955a18a21d1f6fb8078 *man/ras2vox_tkr.Rd
ded0c1efcd3a520afe0dc973ea0762d7 *man/read.colorcsv.Rd
b51aeb3225e465fc76b3dd04adca520f *man/read.md.demographics.Rd
5322805f6bf6aeeeaec8522262f65b60 *man/read.md.subjects.Rd
536f0f43bb84252ca4f4d6e801f81a83 *man/readable.volume.Rd
8810631a38ace6ddfea76800b05dcd81 *man/regions.to.ignore.Rd
9b47227e05ba5642bd6a9b449e50f22b *man/report.on.demographics.Rd
46f7883648365049be897da0a000986c *man/rglactions.has.key.Rd
825bd1b5d4cdddf9273e832fb32e7ed8 *man/rglvoxels.Rd
5ce97bb570cd9b5ec826d1a61c7efd51 *man/rotate2D.Rd
9acd75208e4e83110f50f6e54943007c *man/rotate90.Rd
4b1a1ab10d5caebac03497a101ac3249 *man/sort.coloredmeshes.by.hemi.Rd
c7338217c2ea5840c91d8467161dc716 *man/spread.values.over.annot.Rd
7975caffcdbfb580221bca8297ceb46e *man/spread.values.over.hemi.Rd
29bcc52c658726a1740b984b8b38216b *man/spread.values.over.subject.Rd
46872824877e3b4bd41504a3ebbbdce1 *man/subject.annot.Rd
330beca9e78e6b2a0caa0ebfe3424e5a *man/subject.atlas.agg.Rd
8f63681d3339cda630c9185309cf1b01 *man/subject.filepath.any.Rd
dd887959da64e9a69a38940dc58bd539 *man/subject.filepath.morph.native.Rd
7cccfd6ccc04ca22709216b21fd09762 *man/subject.filepath.morph.standard.Rd
bd6a3b702286803fd41b746c6d7a839a *man/subject.label.Rd
a788fd81349cb316d4c2eda77378208d *man/subject.label.from.annot.Rd
b527d1599341c8c2ecf5143b49132ebd *man/subject.lobes.Rd
bb4c8f45439824dfb873d7f437384d33 *man/subject.mask.Rd
3b39bf37afb2def6985d7a45e78a60d0 *man/subject.morph.native.Rd
2db86e28bcac654c3d4a3cca8615ce18 *man/subject.morph.standard.Rd
b410888db87636c016a20971f79553b6 *man/subject.surface.Rd
36f3b7fd9ac92b6efbe8a16af05dd9a8 *man/subject.volume.Rd
f12fa6b6310191aa3dab5d776a79880c *man/test.numerical.meandiff.Rd
6657fb73ffcc95ed1905e4049aa1e683 *man/test.numerical.meandiff.paired.Rd
9c981f7707d7075f89ae9ae0080b5862 *man/test.numerical.meandiff.unpaired.Rd
99e2aa0ec3d4bf185a3c0976c07d2ae8 *man/vis.color.on.subject.Rd
3ae2b0516a61a681e9b563017b90ad63 *man/vis.coloredmesh.Rd
cc17b0954a2396cb236032d2c1dcfd07 *man/vis.coloredmeshes.Rd
e0465747e6bc214fae0e2f5abce32dd2 *man/vis.coloredmeshes.rotating.Rd
7df105c9203c7adb12debdb580457904 *man/vis.colortable.legend.Rd
1ac26e3fbe0ef68110f795a6576fce3e *man/vis.data.on.fsaverage.Rd
d2a71326685911aa328aca23bff12294 *man/vis.data.on.subject.Rd
28a30f914fd1bbde9d1de483db0418c0 *man/vis.labeldata.on.subject.Rd
a5377408b252769e5677c1396fa914e3 *man/vis.mask.on.subject.Rd
c867a3a1adb366ae06b183f0c42efc28 *man/vis.path.along.verts.Rd
53e1e3a3495cb831393ab2710d2a7a51 *man/vis.region.values.on.subject.Rd
75ddf8444ca3e4b824a9ae7479434e3c *man/vis.renderable.Rd
d202ece516490ee9f61c8ffbfcc36e4c *man/vis.rotated.coloredmeshes.Rd
e1cf5b37258933a2c69fc5129320513f *man/vis.subject.annot.Rd
1df33a19d82bd5062853a3ac8fddc372 *man/vis.subject.label.Rd
97eb7ce33a4e4f38141535c56e6ab744 *man/vis.subject.morph.native.Rd
636374d94d1590d0d9e13be432a8e9ad *man/vis.subject.morph.standard.Rd
9a943b4d76726a9099973fba7a518255 *man/vis.symmetric.data.on.subject.Rd
f35911274beb1efad3b2f079b3d3da56 *man/vislayout.from.coloredmeshes.Rd
6cae6490c527889ed288b17769ee6c19 *man/vol.boundary.box.Rd
b8f655d25a0f111f72fbbf5d5087d0d5 *man/vol.boundary.box.apply.Rd
08ddfa9d439431d56c4a52e599210ab2 *man/vol.boundary.mask.Rd
4eb8ceff404acdd03cc19e8276f2fbc4 *man/vol.hull.Rd
e2e3610987a0241d0bf652d31cedc208 *man/vol.imagestack.Rd
a79832cf51ed0c18dae4afb73e92391b *man/vol.intensity.to.color.Rd
7aebc39557c3da001895f762c74e77f8 *man/vol.mask.from.segmentation.Rd
a5db1df0b7ffc0ffb9ca37e4c02623a4 *man/vol.merge.Rd
690eb0c417f475251ee30a84941d18bc *man/vol.overlay.colors.from.activation.Rd
aa2d436434e0fab703ecf9b7a994925c *man/vol.overlay.colors.from.colortable.Rd
4bf5d4f2dc7de02db703e571f77565cb *man/vol.plane.axes.Rd
4b42d85a3674f1c699c7fce19071e4b0 *man/vol.planes.Rd
ef051267b2a169e77431797436d16a41 *man/vol.slice.Rd
6f873cb7212c1cc18947c3a9a1d257bf *man/vol.vox.from.crs.Rd
6bc4d633d5a4e355e954ab2cfbd86fb8 *man/volvis.contour.Rd
cae163882730b4f647e790b243d0977b *man/volvis.lightbox.Rd
10136a3245170ece9a4d6bc819e49866 *man/volvis.voxels.Rd
54a273911067b903e98cedf077350de4 *man/vox2ras_tkr.Rd
0c8ca60bea09883978251edb378a7f28 *man/write.region.aggregated.Rd
37e3264e8ce7e93db7d47727f2bf28f6 *man/write.region.values.Rd
3ed9c864a400ae5ac0187b90015c22bf *man/write.region.values.fsaverage.Rd
8a6c0ccd71a71d0545decff2ed7d4e8c *tests/testthat.R
7a5610bada438a28ff12938df6f85726 *tests/testthat/helper-functions.R
b8c58074f270bb758ecb6c563a2834d0 *tests/testthat/test-atlas.R
ea3438d7f64c66c427689c951c657135 *tests/testthat/test-fsdir-abstraction-group.R
50e5817dcdfc32b670db0fe96ea28fd1 *tests/testthat/test-fsdir-abstraction-subject.R
36225bf157db206d6825b5de9c79d6f0 *tests/testthat/test-helpers.R
dfd261a266cf1ff7ac5f1629c2f6ebeb *tests/testthat/test-mesh-helpers.R
86e2177c6587bd16ebbead40196bd7b8 *tests/testthat/test-metadata-io.R
6128f6704260ce1fa0eed072c096057c *tests/testthat/test-morph-agg.R
31d20775fa1fba0d876bd73fa5fa44d1 *tests/testthat/test-morph-atlas-agg.R
3621e56373b6decfc904d091b8d94be9 *tests/testthat/test-morph-concat.R
048fea935df2be38e1c9bffcb62f0dfb *tests/testthat/test-vis-multiview.R
d43fa3cb122dc98f5061d21178d89c2f *tests/testthat/test-vis-surface-background.R
e7460829ffdcdab8e039a70f8f1f03ee *tests/testthat/test-vis-volume-3d.R
4ff039b12584930965031f994062b732 *tests/testthat/test-vis-volume.R
c062eaa18920fe03b54238bec1bf050a *tests/testthat/test-vis.R
f24cd1ddda72385875723de46dfa3430 *tests/testthat/test-volume.R
facc1f0c3c99ecf76e96f6f3ea47fbbd *vignettes/colorbar_bgplot3d.jpg
4d421e33b2e0d6cf2620aece92841ed8 *vignettes/colorbar_separate.jpg
33311436f4efb5e08e4e07f1db7b19f2 *vignettes/fsbrain.Rmd
65c3a0ee1012a81eb57f038bc7a3fa80 *vignettes/fsbrain_aparc.jpg
cc619ff46db4d83a94c9ca7e5c232e5c *vignettes/fsbrain_ct.jpg
6ec3f95cad310f5f632f90de1e517798 *vignettes/fsbrain_faq.Rmd
050775f2d72f7e085f6ff5b7773830a9 *vignettes/fsbrain_lightbox.jpg
f1aafe8cd8a063f5d1271ad4931a08f0 *vignettes/fsbrain_vis_bg.jpg
ed2b2a9aac598cef0cd8fbabe7a2f95c *vignettes/fsbrain_vis_surfaces.jpg
99107add34c00baac5a2e61944a7ec8a *vignettes/fsbrain_vis_views.jpg
bf012995ec69a1dcd9c61bb2523d6269 *vignettes/fsbrain_vol.Rmd
