a879c5519592ff3da68c4d12f92722ce *DESCRIPTION
0d7b2328509c3837bac3ff6e9c553d7d *NAMESPACE
c44a76349594ace62702f5859d959567 *R/Binary_Etc.R
47307cd6c4bcebabfe6cb714bb9fde47 *R/Binary_Function.R
8470a09f109264da7e6d77d4c8b89f97 *R/Binary_Function1.R
d9264c4ecac88d6d3b6a3b21e374c333 *R/Binary_MAIN.R
31816772336a4eb2c9e557d4a3b89724 *R/Binary_MAIN_ExactBin.R
aa705c59c7cd0ff31dacf366a250b803 *R/Binary_Result_Calibration.R
3bf018e03e14b45f76e36f74eac2b5c7 *R/Binary_single.b.firth.R
112a098007343e057e918a9f09400d3f *R/Function.R
048612b41b8efe9ea34d8cd9d8d2553c *R/Function_Power_Resampling.R
23a31a5dac940b7a217be418ba78401e *R/Joint_CommonRare.R
a270d1f8802d88edb99d9e9ed343d164 *R/Kernel.R
53c74af32e5257988fc79154626b2119 *R/MAIN.R
9d71e777940a97b4215101cef8beac5a *R/MK_SSD_All_Output.R
3a1e44e9e05384ee2240ef9eca179cac *R/Main_SSD.R
99d3d304000ec9fd1ce2f5637964add6 *R/Null_Model.R
9e511cede46a7537cffef953dd302247 *R/Power.R
d2e084f5648696600b31e629ffe01786 *R/Power_Corr.R
192e270bf689a25409a2b16e5aaaab5e *R/SKAT_CompQuadForm.R
7bf6ebc103a7fce7ee12d4b167d8e4b8 *R/SKAT_EMMAX.R
c641553ad9a5ea32916f087e7c2df25b *R/SKAT_Linear.R
3c93c2ab6405a64e7ce9d324890dd3de *R/SKAT_Logistic.R
7e81c6dccd195469f146648b9a031c48 *R/SKAT_Logistic_VarMatching.R
f09679c113a09080d20502b217466495 *R/SKAT_Optimal.R
185c9f95f9b6dbe980d623dc65abaec5 *R/SKAT_Optimal_VarMatching.R
18c12e39dbb4dfc20f02283d09397978 *R/SSD.R
f0df7e1420445a0b21b8260a39aa972e *R/X_Chrom.R
c937bc02df40b8fe18c58197f251300e *build/vignette.rds
285c25ba69c3690a93d07dd71fda77ea *data/SKAT.example.ChrX.rda
304b5e62e99bd735da2396143b122637 *data/SKAT.example.rda
cc8b39a41c61bf6aad8279c4f4f7609f *data/SKAT.fam.example.rda
f6bed7fd9e1da8c837afcca0d4fe51ae *data/SKAT.haplotypes.rda
439f7b3641774444b4ce77e15d0ed289 *data/SKATBinary.example.rda
6daf2405b55d75521ac6cdbfd13f441d *data/datalist
c2e8806fb028822a5d517a317ed2aa55 *inst/doc/SKAT.R
811d306ed8b9317490b44a4aa6e1d828 *inst/doc/SKAT.Rnw
5ffd200412399a122fca5b5f88720cf1 *inst/doc/SKAT.pdf
70bfc72058b01b3dca52f5e99eec5b04 *man/Close_SSD.rd
11f75a886b29c638e6ac97c40056749c *man/Generate_SSD_SetID.rd
44e71fdb50e0cb011da86080852b93c4 *man/Get_EffectiveNumberTest.rd
b3c229ae3d3cc8875545b88d88a0bf03 *man/Get_Genotypes_SSD.rd
55b350dea84ec8d1a5f253ed035cef26 *man/Get_Logistic_Weights.rd
c49943a248ac7b40a4f0050df487b712 *man/Get_RequiredSampleSize.rd
2c7a5820a776c962ecc8e0e672217ad7 *man/Get_Resampling_Pvalue.rd
0c2835bd15a3e41e00ed79491cb58ce4 *man/Open_SSD.rd
4575dde911ac5ee425208945e674608c *man/Power_Continuous.rd
9c9af4abe8dc63f067421752beac4eb9 *man/Power_Logistic.rd
33ef518f1fef87e562b02c6414f47d87 *man/QQPlot_Adj.rd
5a727c93cfae303b872f5e7a0675e3e1 *man/Read_Plink_FAM.rd
f4fa1ff0c4e8e320821c8e82a1bddb04 *man/Read_SNP_WeightFile.rd
fbfba825abfdb2cb9506f3f9ad0292c5 *man/Resampling_FWER.rd
a8bdcee5138ffcae92c0ef5435b3df2d *man/SKAT.SSD.All.rd
523502b481b8e5d1a89df192f080fcb5 *man/SKAT.example.ChrX.rd
8d815f91cd850341802b9ecc334a1569 *man/SKAT.example.rd
4c665d009528437a28381f4d2c208c53 *man/SKAT.fam.example.rd
9d453b59b6c82076ca126baf7f6da767 *man/SKAT.haplotypes.rd
d2f7c23693b21d907d1b161d72a64f3f *man/SKAT.rd
3e7305ff691a66f8422af861e4489f69 *man/SKATBinary.example.rd
a3a7ec7be205402bd54687568d7818b0 *man/SKATBinary.rd
48e5d020d872ae68017df2838dd2be01 *man/SKATBinary_Single.rd
576176332837b35155dad4082b95ff31 *man/SKAT_ChrX.rd
6a0cdac4e49b4c543d9a3b54571fd857 *man/SKAT_CommonRare.rd
3295762f833991e39c5e0543082d18a1 *man/SKAT_NULL_emmaX.rd
7bfe04feee060ba2912d508016d53a07 *man/SKAT_Null_Model.rd
13f68737273583b021121a984c161788 *man/SKAT_Null_Model_MomentAdjust.rd
4006d5fee5b0ca253c6416825d1a5753 *man/SSD_FILE_OPEN.rd
307bc698e7079d768fc29c97d3198bd6 *src/Binary_ComputeExact.cpp
2f306d4e2de7689eda64ff32c6271d29 *src/Binary_ComputeExact.h
6ca76298f37626f57caba81818115c1a *src/Binary_ComputeExactMC.cpp
f976022a03e69e6509e04ceea494a5a3 *src/Binary_ComputeExactMC.h
ddf907473f0e90a91c43f404f13040e0 *src/Binary_ComputeExactSKATO.cpp
2436f8b82a67f0fd90ab44211b470188 *src/Binary_HyperGeo.cpp
6c43997ba2c7b07b7b91bc571c14e687 *src/Binary_HyperGeo.h
a815f9bd5aca02a2540754d019b99c23 *src/Binary_Permu_SKAT.cpp
381085bdcd6c68edc569947ed7c0d914 *src/Binary_Permu_SKAT.h
9ca34afa3125789d36404222b323fd2c *src/Binary_global.cpp
7fdec286841854360ac2f77d12d59620 *src/Binary_global.h
460e5e3c45c795db72dba56aa88c41f7 *src/Binary_resampling.c
c026767413f7c44c9eb102f2b06adc6f *src/DArray.h
eff07e87bdbbbb8fa621f68f976d187f *src/NPsort.h
bd13313c3a83994626fe11883afa28eb *src/bed_reader.cpp
956c5d9e7833c0b67925fb8f8f0ad4c3 *src/bed_reader.h
40e3d557b770197e0e877d6e8076f651 *src/error_messages.h
99314358a051a70b04d8acca23b35282 *src/interface.cpp
63476d659b187d571d62dfbd481c937f *src/interface_to_R.cpp
38acabcdedb64802ae8dc45053fba2e1 *src/interface_to_R.h
b39ebcd0aeca75723efa44c21cfb5e0e *src/kernel_func.c
2e0a3aaa77d51650a04f4b276d205f0a *src/mwo_reader.cpp
2fbadfde74a995d1a5e24b77b6303153 *src/mwo_reader.h
55329168ddfec3c1bae4a17c33b8373d *src/qfc.cpp
f69c48729819a4bff8cb8018f42b0f4b *src/set_bed_merge_main.cpp
eaec96db18ae3b860c39632008af438b *src/setid_bim_index.cpp
1b91ff8234475b148c85e765abb2a237 *src/setid_bim_index.h
cff473f152929cc171a7235ce40dac8c *vignettes/Example1.Cov
ba60f2917612cca53407a1933d988f39 *vignettes/Example1.SetID
58f150ca5ebc97ec648976ebdec87802 *vignettes/Example1.bed
e3b99ed0a36686c879c840e293e7687d *vignettes/Example1.bim
6e703716b569c14804f785d0cc8160dd *vignettes/Example1.fam
6b84a1c7a6e11f0d84a1cfc46f4cf151 *vignettes/Example1.zip
a4fe8d43443b9b642487766e6a00edb1 *vignettes/Example1_NoHeader.Cov
254951838363388801b833770db0d905 *vignettes/Example1_Ord.Cov
712467feaf10611efb83979a19542d68 *vignettes/Example1_Weight.txt
9a8d91e7b3c8d88b3d465b2c5ee5e614 *vignettes/Example1_old.fam
811d306ed8b9317490b44a4aa6e1d828 *vignettes/SKAT.Rnw
aed3b04aca9252ca2304426184f124ad *vignettes/SKATBinary.example.SetID
8bc37f067620cb3e10ad29809ec1ae4b *vignettes/SKATBinary.example.bed
6dd7c3002b63f683e32131e75b2d4cb8 *vignettes/SKATBinary.example.bim
0743a801b4c9bb8271d99a45db2cf73d *vignettes/SKATBinary.example.cov
d9afb3be7eb8352c2117f6f2d2c5ad33 *vignettes/SKATBinary.example.fam
